RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ARMCX5Q6P1M9 558 aa20.09■□□□□ 0.81
SMC4-211ENST00000469858 TRMT1LQ7Z2T5 733 aaKnown RBP20.09■□□□□ 0.81
SMC4-211ENST00000469858 FAM114A1Q8IWE2 563 aa20.09■□□□□ 0.81
SMC4-211ENST00000469858 CCDC150Q8NCX0 1101 aa20.09■□□□□ 0.81
SMC4-211ENST00000469858 CNOT6LQ96LI5 555 aaKnown RBP20.09■□□□□ 0.81
SMC4-211ENST00000469858 PORCNQ9H237 461 aa20.09■□□□□ 0.81
SMC4-211ENST00000469858 KCND2Q9NZV8 630 aa20.09■□□□□ 0.81
SMC4-211ENST00000469858 MCM3APO60318 1980 aa20.09■□□□□ 0.81
SMC4-211ENST00000469858 DCAF8L1A6NGE4 600 aa20.08■□□□□ 0.81
SMC4-211ENST00000469858 ITGBL1O95965 494 aaPredicted RBP20.08■□□□□ 0.81
SMC4-211ENST00000469858 ZBTB48P10074 688 aaPredicted RBP20.08■□□□□ 0.81
SMC4-211ENST00000469858 GAP43P17677 238 aa20.08■□□□□ 0.81
SMC4-211ENST00000469858 SFPQP23246 707 aaKnown RBP eCLIP20.08■□□□□ 0.81
SMC4-211ENST00000469858 YWHABP31946 246 aaKnown RBP20.08■□□□□ 0.81
SMC4-211ENST00000469858 ICAM3P32942 547 aa20.08■□□□□ 0.81
SMC4-211ENST00000469858 SP2Q02086 613 aa20.08■□□□□ 0.81
SMC4-211ENST00000469858 PADI6Q6TGC4 694 aa20.08■□□□□ 0.81
SMC4-211ENST00000469858 ANKRD23Q86SG2 305 aa20.08■□□□□ 0.81
SMC4-211ENST00000469858 C4orf19Q8IY42 314 aa20.08■□□□□ 0.81
SMC4-211ENST00000469858 SMAP1Q8IYB5 467 aaPredicted RBP20.08■□□□□ 0.81
SMC4-211ENST00000469858 ANKRD13CQ8N6S4 541 aa20.08■□□□□ 0.81
SMC4-211ENST00000469858 GPRC5AQ8NFJ5 357 aa20.08■□□□□ 0.81
SMC4-211ENST00000469858 CCDC43Q96MW1 224 aaKnown RBP20.08■□□□□ 0.81
SMC4-211ENST00000469858 MRPL44Q9H9J2 332 aaKnown RBP20.08■□□□□ 0.81
SMC4-211ENST00000469858 EFCC1Q9HA90 598 aa20.08■□□□□ 0.81
SMC4-211ENST00000469858 DBR1Q9UK59 544 aaKnown RBP20.08■□□□□ 0.81
SMC4-211ENST00000469858 ZNF500O60304 480 aaPredicted RBP20.08■□□□□ 0.8
SMC4-211ENST00000469858 CHADLQ6NUI6 762 aa20.08■□□□□ 0.8
SMC4-211ENST00000469858 MYCT1Q8N699 235 aa20.08■□□□□ 0.8
SMC4-211ENST00000469858 SHCBP1Q8NEM2 672 aa20.08■□□□□ 0.8
SMC4-211ENST00000469858 TELO2Q9Y4R8 837 aa20.08■□□□□ 0.8
SMC4-211ENST00000469858 MYH9P35579 1960 aaKnown RBP20.08■□□□□ 0.8
SMC4-211ENST00000469858 PLXNB2O15031 1838 aa20.07■□□□□ 0.8
SMC4-211ENST00000469858 TMEM150BA6NC51 233 aa20.07■□□□□ 0.8
SMC4-211ENST00000469858 MYBP10242 640 aa20.07■□□□□ 0.8
SMC4-211ENST00000469858 RARRES1P49788 294 aa20.07■□□□□ 0.8
SMC4-211ENST00000469858 HUNKP57058 714 aa20.07■□□□□ 0.8
SMC4-211ENST00000469858 ZCWPW2Q504Y3 356 aa20.07■□□□□ 0.8
SMC4-211ENST00000469858 UTP14CQ5TAP6 766 aaKnown RBP20.07■□□□□ 0.8
SMC4-211ENST00000469858 EEPD1Q7L9B9 569 aa20.07■□□□□ 0.8
SMC4-211ENST00000469858 C17orf53Q8N3J3 647 aaPredicted RBP20.07■□□□□ 0.8
SMC4-211ENST00000469858 FGD4Q96M96 766 aa20.07■□□□□ 0.8
SMC4-211ENST00000469858 SH2D3AQ9BRG2 576 aa20.07■□□□□ 0.8
SMC4-211ENST00000469858 PARVGQ9HBI0 331 aa20.07■□□□□ 0.8
SMC4-211ENST00000469858 OLFML3Q9NRN5 406 aa20.07■□□□□ 0.8
SMC4-211ENST00000469858 GABBR1Q9UBS5 961 aa20.07■□□□□ 0.8
SMC4-211ENST00000469858 ODF2LQ9ULJ1 636 aa20.07■□□□□ 0.8
SMC4-211ENST00000469858 DNAJC25-GNG10A0A024R161 153 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 B4DLN1 442 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 PES1O00541 588 aaKnown RBP20.06■□□□□ 0.8
SMC4-211ENST00000469858 GCNT3O95395 438 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 PSAPP07602 524 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 PRKCSHP14314 528 aaPredicted RBP20.06■□□□□ 0.8
SMC4-211ENST00000469858 GUCY2CP25092 1073 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 ACTR2P61160 394 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 CYFIP1Q7L576 1253 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 MPHOSPH6Q99547 160 aaKnown RBP20.06■□□□□ 0.8
SMC4-211ENST00000469858 TUBGCP2Q9BSJ2 902 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 USO1O60763 962 aaKnown RBP20.06■□□□□ 0.8
SMC4-211ENST00000469858 FGFR1OPO95684 399 aaKnown RBP20.06■□□□□ 0.8
SMC4-211ENST00000469858 CLCN1P35523 988 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 PBX1P40424 430 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 MTIF2P46199 727 aaKnown RBP20.06■□□□□ 0.8
SMC4-211ENST00000469858 CCNA1P78396 465 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 CCZ1BP86790 482 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 CCZ1P86791 482 aaPredicted RBP20.06■□□□□ 0.8
SMC4-211ENST00000469858 GOLGA8FQ08AF8 430 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 GOLGA8DPQ0D2H9 430 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 TBX2Q13207 712 aaPredicted RBP20.06■□□□□ 0.8
SMC4-211ENST00000469858 FOXR2Q6PJQ5 311 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 LRRC55Q6ZSA7 311 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 MAEAQ7L5Y9 396 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 EPM2AIP1Q7L775 607 aaPredicted RBP20.06■□□□□ 0.8
SMC4-211ENST00000469858 KIAA1524Q8TCG1 905 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 KCTD10Q9H3F6 313 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 PLXNA1Q9UIW2 1896 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 ARID2Q68CP9 1835 aa20.06■□□□□ 0.8
SMC4-211ENST00000469858 HIP1RO75146 1068 aa20.05■□□□□ 0.8
SMC4-211ENST00000469858 PRPF6O94906 941 aaKnown RBP20.05■□□□□ 0.8
SMC4-211ENST00000469858 SKILP12757 684 aa20.05■□□□□ 0.8
SMC4-211ENST00000469858 UBXN1Q04323 297 aa20.05■□□□□ 0.8
SMC4-211ENST00000469858 PLA2G4FQ68DD2 849 aa20.05■□□□□ 0.8
SMC4-211ENST00000469858 SWSAP1Q6NVH7 229 aa20.05■□□□□ 0.8
SMC4-211ENST00000469858 ATP6V0A1Q93050 837 aa20.05■□□□□ 0.8
SMC4-211ENST00000469858 LGALS16A8MUM7 142 aa20.04■□□□□ 0.8
SMC4-211ENST00000469858 BACH1O14867 736 aa20.04■□□□□ 0.8
SMC4-211ENST00000469858 UBA1P22314 1058 aaKnown RBP20.04■□□□□ 0.8
SMC4-211ENST00000469858 GCLCP48506 637 aaPredicted RBP20.04■□□□□ 0.8
SMC4-211ENST00000469858 ZNF131P52739 623 aa20.04■□□□□ 0.8
SMC4-211ENST00000469858 FKBP3Q00688 224 aaKnown RBP20.04■□□□□ 0.8
SMC4-211ENST00000469858 XKR9Q5GH70 373 aa20.04■□□□□ 0.8
SMC4-211ENST00000469858 CCDC60Q8IWA6 550 aaPredicted RBP20.04■□□□□ 0.8
SMC4-211ENST00000469858 PTPN18Q99952 460 aa20.04■□□□□ 0.8
SMC4-211ENST00000469858 SEL1LQ9UBV2 794 aa20.04■□□□□ 0.8
SMC4-211ENST00000469858 SOCS7O14512 581 aa20.04■□□□□ 0.8
SMC4-211ENST00000469858 TPM2P07951 284 aa20.04■□□□□ 0.8
SMC4-211ENST00000469858 NMT1P30419 496 aaKnown RBP20.04■□□□□ 0.8
SMC4-211ENST00000469858 MAPK7Q13164 816 aa20.04■□□□□ 0.8
SMC4-211ENST00000469858 ODR4Q5SWX8 454 aa20.04■□□□□ 0.8
SMC4-211ENST00000469858 MIS18BP1Q6P0N0 1132 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms