RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 GSPT2Q8IYD1 628 aaKnown RBP10.83□□□□□ -0.68
NUP50-214ENST00000469163 PIAS4Q8N2W9 510 aaPredicted RBP10.83□□□□□ -0.68
NUP50-214ENST00000469163 CCDC148Q8NFR7 591 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 ZNF274Q96GC6 653 aaPredicted RBP10.83□□□□□ -0.68
NUP50-214ENST00000469163 VIPAS39Q9H9C1 493 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 ATXN10Q9UBB4 475 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 NUP98P52948 1817 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 ZMYM6O95789 1325 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 PAPPAQ13219 1627 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 GPR75-ASB3A0A0A6YYF3 556 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 A6NHS1 94 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 PCK1P35558 622 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 HDAC4P56524 1084 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 TNIP1Q15025 636 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 SAMD3Q8N6K7 520 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 DESI2Q9BSY9 194 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 SPO11Q9Y5K1 396 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 USH1CQ9Y6N9 552 aa10.83□□□□□ -0.68
NUP50-214ENST00000469163 ADM5C9JUS6 153 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 MAP3K13O43283 966 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 MYCLP12524 364 aaPredicted RBP10.82□□□□□ -0.68
NUP50-214ENST00000469163 CALML3P27482 149 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 PSMC1P62191 440 aaKnown RBP10.82□□□□□ -0.68
NUP50-214ENST00000469163 PKN1Q16512 942 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 GADL1Q6ZQY3 521 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 COG1Q8WTW3 980 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 JAKMIP2Q96AA8 810 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 OTUD5Q96G74 571 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 CDK5RAP3Q96JB5 506 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 FGD4Q96M96 766 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 HINFPQ9BQA5 517 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 SCAND2PQ9GZW5 306 aaPredicted RBP10.82□□□□□ -0.68
NUP50-214ENST00000469163 CDC23Q9UJX2 597 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 UBR2Q8IWV8 1755 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 COL4A1P02462 1669 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 NFKBIEO00221 500 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 LIN7AO14910 233 aaPredicted RBP10.82□□□□□ -0.68
NUP50-214ENST00000469163 TIMM44O43615 452 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 ABL1P00519 1130 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 IL1R1P14778 569 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 DRP2Q13474 957 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 KRT26Q7Z3Y9 468 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 SLC43A3Q8NBI5 491 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 TRPM4Q8TD43 1214 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 WASF1Q92558 559 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 SLC7A5P2Q9GIP4 190 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 BLZF1Q9H2G9 400 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 PCDHA1Q9Y5I3 950 aa10.82□□□□□ -0.68
NUP50-214ENST00000469163 DNM1LO00429 736 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 DEXIO95424 95 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 KRT2P35908 639 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 GUCY1A3Q02108 690 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 NSUN2Q08J23 767 aaKnown RBP eCLIP10.81□□□□□ -0.68
NUP50-214ENST00000469163 BTG3Q14201 252 aaPredicted RBP10.81□□□□□ -0.68
NUP50-214ENST00000469163 ZBTB8BQ8NAP8 495 aaPredicted RBP10.81□□□□□ -0.68
NUP50-214ENST00000469163 DCPSQ96C86 337 aaKnown RBP10.81□□□□□ -0.68
NUP50-214ENST00000469163 ABCF3Q9NUQ8 709 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 PRELID1Q9Y255 219 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 THSD7AQ9UPZ6 1657 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 TRIM43BA6NCK2 446 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 UNCXA6NJT0 531 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 PP2D1A8MPX8 630 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 KRT18P05783 430 aaKnown RBP10.81□□□□□ -0.68
NUP50-214ENST00000469163 FXNQ16595 210 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 PPANQ9NQ55 473 aaKnown RBP10.81□□□□□ -0.68
NUP50-214ENST00000469163 MKS1Q9NXB0 559 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 CHMP2BQ9UQN3 213 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 CACNA1FO60840 1977 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 TMEM221A6NGB7 291 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 F5H6K3 240 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 POLR2DO15514 142 aaKnown RBP10.81□□□□□ -0.68
NUP50-214ENST00000469163 TUBBP07437 444 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 MLH1P40692 756 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 STAT6P42226 847 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 HMGCS2P54868 508 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 ELF3P78545 371 aaPredicted RBP10.81□□□□□ -0.68
NUP50-214ENST00000469163 GRIN1Q05586 938 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 KLRC3Q07444 240 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 THOC7Q6I9Y2 204 aaKnown RBP10.81□□□□□ -0.68
NUP50-214ENST00000469163 TMC4Q7Z404 712 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 LMNTD2Q8IXW0 634 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 CCT8L2Q96SF2 557 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 PPP1R12CQ9BZL4 782 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 ZNF541Q9H0D2 1346 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 RTL9Q8NET4 1388 aa10.81□□□□□ -0.68
NUP50-214ENST00000469163 MGRN1O60291 552 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 TTLL1O95922 423 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 MCM3P25205 808 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 PSMC4P43686 418 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 SCTRP47872 440 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 TUFMP49411 452 aaKnown RBP10.8□□□□□ -0.68
NUP50-214ENST00000469163 USP46P62068 366 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 RNF220Q5VTB9 566 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 USP49Q70CQ1 688 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 DHX40Q8IX18 779 aaKnown RBP10.8□□□□□ -0.68
NUP50-214ENST00000469163 TTC30BQ8N4P2 665 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 NOA1Q8NC60 698 aaKnown RBP10.8□□□□□ -0.68
NUP50-214ENST00000469163 SLC16A10Q8TF71 515 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 IWS1Q96ST2 819 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 ZNF180Q9UJW8 692 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms