RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ZSCAN12O43309 604 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 TUBB4AP04350 444 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 PSMC5P62195 406 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 HTRA3P83110 453 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 CACNB1Q02641 598 aaPredicted RBP10.33□□□□□ -0.76
SMC1A-205ENST00000469129 PPP2R3AQ06190 1150 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 ARID5BQ14865 1188 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 PWP2Q15269 919 aaKnown RBP10.33□□□□□ -0.76
SMC1A-205ENST00000469129 STXBP2Q15833 593 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 CCDC40Q4G0X9 1142 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 ZCWPW2Q504Y3 356 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 LDLRAD1Q5T700 205 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 MAP1SQ66K74 1059 aaPredicted RBP10.33□□□□□ -0.76
SMC1A-205ENST00000469129 LRRC55Q6ZSA7 311 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 IRF2BP1Q8IU81 584 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 C4orf19Q8IY42 314 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 RETREG2Q8NC44 543 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 BANK1Q8NDB2 785 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 SLC17A8Q8NDX2 589 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 CNKSR2Q8WXI2 1034 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 ATP6V0A1Q93050 837 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 HPS3Q969F9 1004 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 BAG1Q99933 345 aaPredicted RBP10.33□□□□□ -0.76
SMC1A-205ENST00000469129 NOC4LQ9BVI4 516 aaKnown RBP10.33□□□□□ -0.76
SMC1A-205ENST00000469129 RUSC1Q9BVN2 902 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 ASCC2Q9H1I8 757 aaPredicted RBP10.33□□□□□ -0.76
SMC1A-205ENST00000469129 MRPL44Q9H9J2 332 aaKnown RBP10.33□□□□□ -0.76
SMC1A-205ENST00000469129 TYW1Q9NV66 732 aaKnown RBP10.33□□□□□ -0.76
SMC1A-205ENST00000469129 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
SMC1A-205ENST00000469129 SLC45A1Q9Y2W3 748 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 PCDHA2Q9Y5H9 948 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 ZSWIM8A7E2V4 1837 aa10.33□□□□□ -0.76
SMC1A-205ENST00000469129 POTEB2H3BUK9 544 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 TRAF5O00463 557 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 PDXKO00764 312 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 COBLO75128 1261 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 PSAPP07602 524 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 MAPTP10636 758 aaKnown RBP10.32□□□□□ -0.76
SMC1A-205ENST00000469129 RPL13P26373 211 aaKnown RBP10.32□□□□□ -0.76
SMC1A-205ENST00000469129 ICAM3P32942 547 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 ALDH5A1P51649 535 aaPredicted RBP10.32□□□□□ -0.76
SMC1A-205ENST00000469129 ZNF131P52739 623 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 MARSP56192 900 aaKnown RBP10.32□□□□□ -0.76
SMC1A-205ENST00000469129 RAD51AP2Q09MP3 1159 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 LRRC41Q15345 812 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 C1orf186Q6ZWK4 172 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 EPM2AIP1Q7L775 607 aaPredicted RBP10.32□□□□□ -0.76
SMC1A-205ENST00000469129 NCAPG2Q86XI2 1143 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 ZC3H3Q8IXZ2 948 aaKnown RBP10.32□□□□□ -0.76
SMC1A-205ENST00000469129 TC2NQ8N9U0 490 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 SHCBP1Q8NEM2 672 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 PIGOQ8TEQ8 1089 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 SCFD1Q8WVM8 642 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 SLC10A4Q96EP9 437 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 ZFP91Q96JP5 570 aaPredicted RBP10.32□□□□□ -0.76
SMC1A-205ENST00000469129 DRC1Q96MC2 740 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 PAGR1Q9BTK6 254 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 MOV10L1Q9BXT6 1211 aaKnown RBP10.32□□□□□ -0.76
SMC1A-205ENST00000469129 TMX1Q9H3N1 280 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 JPH1Q9HDC5 661 aaPredicted RBP10.32□□□□□ -0.76
SMC1A-205ENST00000469129 ANKEF1Q9NU02 776 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 BTBD7Q9P203 1132 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 TRAF3IP3Q9Y228 551 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 PASKQ96RG2 1323 aa10.32□□□□□ -0.76
SMC1A-205ENST00000469129 CETN3O15182 167 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 SLC16A3O15427 465 aaKnown RBP10.31□□□□□ -0.76
SMC1A-205ENST00000469129 EIF3JO75822 258 aaKnown RBP10.31□□□□□ -0.76
SMC1A-205ENST00000469129 GCNT3O95395 438 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 ITGBL1O95965 494 aaPredicted RBP10.31□□□□□ -0.76
SMC1A-205ENST00000469129 GYPCP04921 128 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 CETPP11597 493 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 KCNA2P16389 499 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 YWHABP31946 246 aaKnown RBP10.31□□□□□ -0.76
SMC1A-205ENST00000469129 TERF1P54274 439 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 CCNA1P78396 465 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 NFIL3Q16649 462 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 KNOP1Q1ED39 458 aaKnown RBP10.31□□□□□ -0.76
SMC1A-205ENST00000469129 TSR1Q2NL82 804 aaKnown RBP10.31□□□□□ -0.76
SMC1A-205ENST00000469129 FIGNQ5HY92 759 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 MIS18BP1Q6P0N0 1132 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 PADI6Q6TGC4 694 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 DLK2Q6UY11 383 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 OTUD6AQ7L8S5 288 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 NELFCDQ8IXH7 590 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 FAM178BQ8IXR5 827 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 CCAR2Q8N163 923 aaKnown RBP10.31□□□□□ -0.76
SMC1A-205ENST00000469129 MYCT1Q8N699 235 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 GOLGA5Q8TBA6 731 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 ZNF507Q8TCN5 953 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 ERGIC2Q96RQ1 377 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 KCTD10Q9H3F6 313 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 MROH8Q9H579 483 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 TBC1D7Q9P0N9 293 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 LARSQ9P2J5 1176 aaKnown RBP10.31□□□□□ -0.76
SMC1A-205ENST00000469129 SLC9A2Q9UBY0 812 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 FAM184BQ9ULE4 1060 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 PCDHB13Q9Y5F0 798 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 PCDHA10Q9Y5I2 948 aa10.31□□□□□ -0.76
SMC1A-205ENST00000469129 A0A1W2PQJ5 194 aa10.3□□□□□ -0.76
SMC1A-205ENST00000469129 SPATA31C2B4DYI2 1134 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms