RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 ARHGEF16Q5VV41 709 aa12.4□□□□□ -0.42
TRAIP-202ENST00000469027 MYSM1Q5VVJ2 828 aa12.4□□□□□ -0.42
TRAIP-202ENST00000469027 PHLDB3Q6NSJ2 640 aa12.4□□□□□ -0.42
TRAIP-202ENST00000469027 TMC5Q6UXY8 1006 aa12.4□□□□□ -0.42
TRAIP-202ENST00000469027 ERC1Q8IUD2 1116 aa12.4□□□□□ -0.42
TRAIP-202ENST00000469027 RSAD2Q8WXG1 361 aa12.4□□□□□ -0.42
TRAIP-202ENST00000469027 RMDN3Q96TC7 470 aa12.4□□□□□ -0.42
TRAIP-202ENST00000469027 FTHL17Q9BXU8 183 aa12.4□□□□□ -0.42
TRAIP-202ENST00000469027 PUS7LQ9H0K6 701 aaKnown RBP12.4□□□□□ -0.42
TRAIP-202ENST00000469027 MLXIPQ9HAP2 919 aa12.4□□□□□ -0.42
TRAIP-202ENST00000469027 GPCPD1Q9NPB8 672 aa12.4□□□□□ -0.42
TRAIP-202ENST00000469027 ARHGEF3Q9NR81 526 aa12.4□□□□□ -0.42
TRAIP-202ENST00000469027 DZANK1Q9NVP4 752 aa12.4□□□□□ -0.42
TRAIP-202ENST00000469027 FBXO4Q9UKT5 387 aa12.4□□□□□ -0.42
TRAIP-202ENST00000469027 LZTS1Q9Y250 596 aa12.4□□□□□ -0.42
TRAIP-202ENST00000469027 FRMPD2Q68DX3 1309 aaPredicted RBP12.39□□□□□ -0.43
TRAIP-202ENST00000469027 NOP56O00567 594 aaKnown RBP12.39□□□□□ -0.43
TRAIP-202ENST00000469027 LRRN2O75325 713 aa12.39□□□□□ -0.43
TRAIP-202ENST00000469027 EIF3JO75822 258 aaKnown RBP12.39□□□□□ -0.43
TRAIP-202ENST00000469027 GLULP15104 373 aa12.39□□□□□ -0.43
TRAIP-202ENST00000469027 CELF3Q5SZQ8 465 aaKnown RBP12.39□□□□□ -0.43
TRAIP-202ENST00000469027 RTN4RL1Q86UN2 441 aaPredicted RBP12.39□□□□□ -0.43
TRAIP-202ENST00000469027 ITPRIPQ8IWB1 547 aa12.39□□□□□ -0.43
TRAIP-202ENST00000469027 PJA1Q8NG27 643 aa12.39□□□□□ -0.43
TRAIP-202ENST00000469027 GPR152Q8TDT2 470 aa12.39□□□□□ -0.43
TRAIP-202ENST00000469027 DCAF4Q8WV16 495 aa12.39□□□□□ -0.43
TRAIP-202ENST00000469027 IWS1Q96ST2 819 aa12.39□□□□□ -0.43
TRAIP-202ENST00000469027 BCO2Q9BYV7 579 aa12.39□□□□□ -0.43
TRAIP-202ENST00000469027 ZSCAN32Q9NX65 697 aa12.39□□□□□ -0.43
TRAIP-202ENST00000469027 PCDHB7Q9Y5E2 793 aa12.39□□□□□ -0.43
TRAIP-202ENST00000469027 CDY2AQ9Y6F7 541 aa12.39□□□□□ -0.43
TRAIP-202ENST00000469027 GSG1L2A8MUP6 293 aa12.38□□□□□ -0.43
TRAIP-202ENST00000469027 CLASP2O75122 1294 aaKnown RBP12.38□□□□□ -0.43
TRAIP-202ENST00000469027 APPP05067 770 aa12.38□□□□□ -0.43
TRAIP-202ENST00000469027 LAG3P18627 525 aa12.38□□□□□ -0.43
TRAIP-202ENST00000469027 RBM25P49756 843 aaKnown RBP12.38□□□□□ -0.43
TRAIP-202ENST00000469027 KRT17Q04695 432 aa12.38□□□□□ -0.43
TRAIP-202ENST00000469027 SMC1AQ14683 1233 aaKnown RBP12.38□□□□□ -0.43
TRAIP-202ENST00000469027 UBE3CQ15386 1083 aa12.38□□□□□ -0.43
TRAIP-202ENST00000469027 RHPN1Q8TCX5 695 aa12.38□□□□□ -0.43
TRAIP-202ENST00000469027 LMBR1Q8WVP7 490 aa12.38□□□□□ -0.43
TRAIP-202ENST00000469027 AGO3Q9H9G7 860 aaKnown RBP12.38□□□□□ -0.43
TRAIP-202ENST00000469027 TYW1Q9NV66 732 aaKnown RBP12.38□□□□□ -0.43
TRAIP-202ENST00000469027 KAT6AQ92794 2004 aa12.38□□□□□ -0.43
TRAIP-202ENST00000469027 MIA3Q5JRA6 1907 aa12.37□□□□□ -0.43
TRAIP-202ENST00000469027 SRRM3A6NNA2 597 aaPredicted RBP12.37□□□□□ -0.43
TRAIP-202ENST00000469027 GDF9O60383 454 aa12.37□□□□□ -0.43
TRAIP-202ENST00000469027 SRFP11831 508 aa12.37□□□□□ -0.43
TRAIP-202ENST00000469027 GBP2P32456 591 aaPredicted RBP12.37□□□□□ -0.43
TRAIP-202ENST00000469027 PLCB3Q01970 1234 aa12.37□□□□□ -0.43
TRAIP-202ENST00000469027 MGAT3Q09327 533 aa12.37□□□□□ -0.43
TRAIP-202ENST00000469027 TAF2Q6P1X5 1199 aa12.37□□□□□ -0.43
TRAIP-202ENST00000469027 GIMAP6Q6P9H5 292 aa12.37□□□□□ -0.43
TRAIP-202ENST00000469027 DCLRE1AQ6PJP8 1040 aa12.37□□□□□ -0.43
TRAIP-202ENST00000469027 PRR23CQ6ZRP0 262 aa12.37□□□□□ -0.43
TRAIP-202ENST00000469027 CABP7Q86V35 215 aa12.37□□□□□ -0.43
TRAIP-202ENST00000469027 FTSJ3Q8IY81 847 aaKnown RBP12.37□□□□□ -0.43
TRAIP-202ENST00000469027 KDF1Q8NAX2 398 aaPredicted RBP12.37□□□□□ -0.43
TRAIP-202ENST00000469027 ZBTB44Q8NCP5 570 aa12.37□□□□□ -0.43
TRAIP-202ENST00000469027 SYTL5Q8TDW5 730 aaPredicted RBP12.37□□□□□ -0.43
TRAIP-202ENST00000469027 BOLA2Q9H3K6 86 aa12.37□□□□□ -0.43
TRAIP-202ENST00000469027 ZNF215Q9UL58 517 aaPredicted RBP12.37□□□□□ -0.43
TRAIP-202ENST00000469027 DENND4AQ7Z401 1863 aa12.37□□□□□ -0.43
TRAIP-202ENST00000469027 WDR19Q8NEZ3 1342 aa12.37□□□□□ -0.43
TRAIP-202ENST00000469027 C2orf71A6NGG8 1288 aa12.36□□□□□ -0.43
TRAIP-202ENST00000469027 TSPY2A6NKD2 308 aa12.36□□□□□ -0.43
TRAIP-202ENST00000469027 NMT2O60551 498 aa12.36□□□□□ -0.43
TRAIP-202ENST00000469027 SLC3A2P08195 630 aaKnown RBP12.36□□□□□ -0.43
TRAIP-202ENST00000469027 NR3C2P08235 984 aa12.36□□□□□ -0.43
TRAIP-202ENST00000469027 MYCLP12524 364 aaPredicted RBP12.36□□□□□ -0.43
TRAIP-202ENST00000469027 UBA1P22314 1058 aaKnown RBP12.36□□□□□ -0.43
TRAIP-202ENST00000469027 PAK2Q13177 524 aa12.36□□□□□ -0.43
TRAIP-202ENST00000469027 BMS1Q14692 1282 aaKnown RBP12.36□□□□□ -0.43
TRAIP-202ENST00000469027 PTPN14Q15678 1187 aa12.36□□□□□ -0.43
TRAIP-202ENST00000469027 ZSCAN25Q6NSZ9 544 aa12.36□□□□□ -0.43
TRAIP-202ENST00000469027 BTNL9Q6UXG8 535 aa12.36□□□□□ -0.43
TRAIP-202ENST00000469027 TRIM50Q86XT4 487 aa12.36□□□□□ -0.43
TRAIP-202ENST00000469027 DNAJB3Q8WWF6 145 aa12.36□□□□□ -0.43
TRAIP-202ENST00000469027 TBC1D5Q92609 795 aa12.36□□□□□ -0.43
TRAIP-202ENST00000469027 STRBPQ96SI9 672 aaKnown RBP12.36□□□□□ -0.43
TRAIP-202ENST00000469027 USP26Q9BXU7 913 aa12.36□□□□□ -0.43
TRAIP-202ENST00000469027 SEMA4GQ9NTN9 838 aa12.36□□□□□ -0.43
TRAIP-202ENST00000469027 COL20A1Q9P218 1284 aa12.36□□□□□ -0.43
TRAIP-202ENST00000469027 FNDC1Q4ZHG4 1894 aaPredicted RBP12.36□□□□□ -0.43
TRAIP-202ENST00000469027 TAF4O00268 1085 aa12.35□□□□□ -0.43
TRAIP-202ENST00000469027 LILRB5O75023 590 aa12.35□□□□□ -0.43
TRAIP-202ENST00000469027 IFIT2P09913 472 aaKnown RBP12.35□□□□□ -0.43
TRAIP-202ENST00000469027 EPCAMP16422 314 aa12.35□□□□□ -0.43
TRAIP-202ENST00000469027 NCLP19338 710 aaKnown RBP12.35□□□□□ -0.43
TRAIP-202ENST00000469027 PBX3P40426 434 aa12.35□□□□□ -0.43
TRAIP-202ENST00000469027 SARSP49591 514 aaKnown RBP12.35□□□□□ -0.43
TRAIP-202ENST00000469027 FAM102BQ5T8I3 360 aa12.35□□□□□ -0.43
TRAIP-202ENST00000469027 UTP14CQ5TAP6 766 aaKnown RBP12.35□□□□□ -0.43
TRAIP-202ENST00000469027 LAIR1Q6GTX8 287 aa12.35□□□□□ -0.43
TRAIP-202ENST00000469027 KCNV1Q6PIU1 500 aa12.35□□□□□ -0.43
TRAIP-202ENST00000469027 TSSK4Q6SA08 328 aa12.35□□□□□ -0.43
TRAIP-202ENST00000469027 PRR23BQ6ZRT6 265 aa12.35□□□□□ -0.43
TRAIP-202ENST00000469027 CLASRPQ8N2M8 674 aaKnown RBP12.35□□□□□ -0.43
TRAIP-202ENST00000469027 SLC44A3Q8N4M1 653 aa12.35□□□□□ -0.43
TRAIP-202ENST00000469027 MRPL43Q8N983 215 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms