RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 APPBP2Q92624 585 aa4.85□□□□□ -1.63
TMEM39A-204ENST00000468545 OSBP2Q969R2 916 aa4.85□□□□□ -1.63
TMEM39A-204ENST00000468545 ANAPC16Q96DE5 110 aa4.85□□□□□ -1.63
TMEM39A-204ENST00000468545 KIF2CQ99661 725 aa4.85□□□□□ -1.63
TMEM39A-204ENST00000468545 NOL10Q9BSC4 688 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-204ENST00000468545 C22orf23Q9BZE7 217 aa4.85□□□□□ -1.63
TMEM39A-204ENST00000468545 IL25Q9H293 177 aa4.85□□□□□ -1.63
TMEM39A-204ENST00000468545 ZFP64Q9NPA5 681 aa4.85□□□□□ -1.63
TMEM39A-204ENST00000468545 PRDM5Q9NQX1 630 aaPredicted RBP4.85□□□□□ -1.63
TMEM39A-204ENST00000468545 HELLSQ9NRZ9 838 aa4.85□□□□□ -1.63
TMEM39A-204ENST00000468545 AATFQ9NY61 560 aaKnown RBP eCLIP4.85□□□□□ -1.63
TMEM39A-204ENST00000468545 TPX2Q9ULW0 747 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-204ENST00000468545 CEP131Q9UPN4 1083 aa4.85□□□□□ -1.63
TMEM39A-204ENST00000468545 COL1A1P02452 1464 aaPredicted RBP4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 MAST3O60307 1309 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 CCDC171Q6TFL3 1326 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 FAM205AQ6ZU69 1335 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 TCRBV5S4A2TA0A5A2 114 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 PRR19A6NJB7 356 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 IGF2BP3O00425 579 aaKnown RBP eCLIP4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 GPAA1O43292 621 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 PRKAB2O43741 272 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 EIF5BO60841 1220 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 UBOX5O94941 541 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 REC8O95072 547 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 MCCP23508 829 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 POLR2BP30876 1174 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 GBP1P32455 592 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 CXCL9Q07325 125 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 UBE3CQ15386 1083 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 DACT2Q5SW24 774 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 ARTNQ5T4W7 220 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 VPS53Q5VIR6 699 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 STRIP1Q5VSL9 837 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 CIAPIN1Q6FI81 312 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 C22orf34Q6ZV56 151 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 FAM214BQ7L5A3 538 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 ADGRA1Q86SQ6 560 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 LCORLQ8N3X6 602 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 CERS5Q8N5B7 392 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 RIN3Q8TB24 985 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 BAHD1Q8TBE0 780 aaPredicted RBP4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 NSUN4Q96CB9 384 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 SLC9A7Q96T83 725 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 LSG1Q9H089 658 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 VPS33BQ9H267 617 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 RNF181Q9P0P0 153 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 SLC4A4Q9Y6R1 1079 aa4.84□□□□□ -1.63
TMEM39A-204ENST00000468545 SALL1Q9NSC2 1324 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 BAG3O95817 575 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 VIL1P09327 827 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 ACRP10323 421 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 HSPD1P10809 573 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 FOSL1P15407 271 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 ATP2B1P20020 1258 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 BTDP43251 543 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 CHMP4BP1P59074 171 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 HAND2P61296 217 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 PICALMQ13492 652 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 TNIP1Q15025 636 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 SLC4A8Q2Y0W8 1093 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 CFAP100Q494V2 611 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 RUFY4Q6ZNE9 571 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 CDH24Q86UP0 819 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 IFNL3Q8IZI9 196 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 FAM169BQ8N8A8 192 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 SH3RF3Q8TEJ3 882 aaPredicted RBP4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 ZNF384Q8TF68 577 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 TGFBRAP1Q8WUH2 860 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 SDR42E1Q8WUS8 393 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 RNF141Q8WVD5 230 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 ARMC5Q96C12 935 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 HEXIM2Q96MH2 286 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 STRBPQ96SI9 672 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 ASPNQ9BXN1 380 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 ZNF408Q9H9D4 720 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 MKNK2Q9HBH9 465 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 USP40Q9NVE5 1235 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 PRKAG3Q9UGI9 489 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 HDAC9Q9UKV0 1011 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 PCDHAC2Q9Y5I4 1007 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 RBM8AQ9Y5S9 174 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 SLC12A7Q9Y666 1083 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 MRVI1Q9Y6F6 885 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 KIF13BQ9NQT8 1826 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 A0A1B0GUL6 1792 aa4.83□□□□□ -1.64
TMEM39A-204ENST00000468545 DUOX1Q9NRD9 1551 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 MROH7-TTC4A0A0A0MT08 1334 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 PDS5AQ29RF7 1337 aaKnown RBP4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 RAD50Q92878 1312 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 ZNF541Q9H0D2 1346 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 SHTN1A0MZ66 631 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 CYP26A1O43174 497 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 TGFB1P01137 390 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 FGAP02671 866 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 ZNF865P0CJ78 1059 aaPredicted RBP4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 GNAT2P19087 354 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 GRIK1P39086 918 aa4.82□□□□□ -1.64
TMEM39A-204ENST00000468545 KIR3DL1P43629 444 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms