RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 CWF19L1Q69YN2 538 aaKnown RBP6.25□□□□□ -1.41
U2AF1-207ENST00000468039 DDX46Q7L014 1031 aaKnown RBP6.25□□□□□ -1.41
U2AF1-207ENST00000468039 ADAT2Q7Z6V5 191 aaKnown RBP6.25□□□□□ -1.41
U2AF1-207ENST00000468039 ZNF526Q8TF50 670 aaPredicted RBP6.25□□□□□ -1.41
U2AF1-207ENST00000468039 ALPK1Q96QP1 1244 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 CRAMP1Q96RY5 1269 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 HDAC8Q9BY41 377 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 LNPKQ9C0E8 428 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 GREM2Q9H772 168 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 PRDM7Q9NQW5 492 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 RNF181Q9P0P0 153 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 SLAMF8Q9P0V8 285 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 PCDHB10Q9UN67 800 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 CDHR2Q9BYE9 1310 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 RBAK-RBAKDNI3L0D1 243 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 ALDH1L1O75891 902 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 RNASE1P07998 156 aaKnown RBP6.24□□□□□ -1.41
U2AF1-207ENST00000468039 NBPF7P0C2Y1 421 aaPredicted RBP6.24□□□□□ -1.41
U2AF1-207ENST00000468039 TRIM27P14373 513 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 CD247P20963 164 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 GRAPQ13588 217 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 FXNQ16595 210 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 CCDC93Q567U6 631 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 KIAA1211LQ6NV74 962 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 RNF111Q6ZNA4 994 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 TTLL11Q8NHH1 800 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 GRAPLQ8TC17 118 aaPredicted RBP6.24□□□□□ -1.41
U2AF1-207ENST00000468039 DHX38Q92620 1227 aaKnown RBP6.24□□□□□ -1.41
U2AF1-207ENST00000468039 ARMC5Q96C12 935 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 TCTN2Q96GX1 697 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 SUCLG2Q96I99 432 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 TAOK3Q9H2K8 898 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 GP6Q9HCN6 339 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 ZNF277Q9NRM2 450 aaPredicted RBP6.24□□□□□ -1.41
U2AF1-207ENST00000468039 MBNL3Q9NUK0 354 aaKnown RBP6.24□□□□□ -1.41
U2AF1-207ENST00000468039 C9orf78Q9NZ63 289 aaPredicted RBP6.24□□□□□ -1.41
U2AF1-207ENST00000468039 PCDHA11Q9Y5I1 949 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 SNED1Q8TER0 1413 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 TAF1P21675 1872 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 KIF16BQ96L93 1317 aa6.24□□□□□ -1.41
U2AF1-207ENST00000468039 PPM1BO75688 479 aa6.23□□□□□ -1.41
U2AF1-207ENST00000468039 DDAH1O94760 285 aa6.23□□□□□ -1.41
U2AF1-207ENST00000468039 GSNP06396 782 aa6.23□□□□□ -1.41
U2AF1-207ENST00000468039 ENDOUP21128 410 aaKnown RBP6.23□□□□□ -1.41
U2AF1-207ENST00000468039 FOXO4P98177 505 aa6.23□□□□□ -1.41
U2AF1-207ENST00000468039 CCDC152Q4G0S7 254 aa6.23□□□□□ -1.41
U2AF1-207ENST00000468039 ZNF662Q6ZS27 426 aa6.23□□□□□ -1.41
U2AF1-207ENST00000468039 ANKS3Q6ZW76 656 aa6.23□□□□□ -1.41
U2AF1-207ENST00000468039 CKAP2LQ8IYA6 745 aa6.23□□□□□ -1.41
U2AF1-207ENST00000468039 KAZALD1Q96I82 304 aa6.23□□□□□ -1.41
U2AF1-207ENST00000468039 GPR101Q96P66 508 aaPredicted RBP6.23□□□□□ -1.41
U2AF1-207ENST00000468039 HAUS7Q99871 368 aa6.23□□□□□ -1.41
U2AF1-207ENST00000468039 API5Q9BZZ5 524 aaKnown RBP6.23□□□□□ -1.41
U2AF1-207ENST00000468039 CWC22Q9HCG8 908 aaKnown RBP6.23□□□□□ -1.41
U2AF1-207ENST00000468039 TCFL5Q9UL49 500 aa6.23□□□□□ -1.41
U2AF1-207ENST00000468039 SUGT1Q9Y2Z0 365 aa6.23□□□□□ -1.41
U2AF1-207ENST00000468039 SF3B6Q9Y3B4 125 aaKnown RBP6.23□□□□□ -1.41
U2AF1-207ENST00000468039 ATP6V0A2Q9Y487 856 aa6.23□□□□□ -1.41
U2AF1-207ENST00000468039 CACNA1FO60840 1977 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 PLIN1O60240 522 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 BBOX1O75936 387 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 SYPP08247 313 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 RAC2P15153 192 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 RPL10P27635 214 aaKnown RBP6.22□□□□□ -1.41
U2AF1-207ENST00000468039 RPS8P62241 208 aaKnown RBP6.22□□□□□ -1.41
U2AF1-207ENST00000468039 GPSM2P81274 684 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 DUSP4Q13115 394 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 SOGA3Q5TF21 947 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 ZKSCAN2Q63HK3 967 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 LMBR1LQ6UX01 489 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 DPP8Q6V1X1 898 aaPredicted RBP6.22□□□□□ -1.41
U2AF1-207ENST00000468039 ATF7IPQ6VMQ6 1270 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 TMEM57Q8N5G2 664 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 LRRN4CLQ8ND94 238 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 DNAJC2Q99543 621 aaKnown RBP6.22□□□□□ -1.41
U2AF1-207ENST00000468039 MEIS3Q99687 375 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 PLA2G12BQ9BX93 195 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 TRIM55Q9BYV6 548 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 FOXP3Q9BZS1 431 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 USP44Q9H0E7 712 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 BICC1Q9H694 974 aaKnown RBP6.22□□□□□ -1.41
U2AF1-207ENST00000468039 WHRNQ9P202 907 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 TMEM59LQ9UK28 342 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 ADAMTS6Q9UKP5 1117 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 ZNF451Q9Y4E5 1061 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 FHOD1Q9Y613 1164 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 COL4A5P29400 1685 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 DUOX1Q9NRD9 1551 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 FER1L6Q2WGJ9 1857 aa6.22□□□□□ -1.41
U2AF1-207ENST00000468039 CHD4Q14839 1912 aa6.21□□□□□ -1.41
U2AF1-207ENST00000468039 ANKRD34BA5PLL1 514 aa6.21□□□□□ -1.42
U2AF1-207ENST00000468039 WTIPA6NIX2 430 aaPredicted RBP6.21□□□□□ -1.42
U2AF1-207ENST00000468039 CSF1RP07333 972 aa6.21□□□□□ -1.42
U2AF1-207ENST00000468039 GTF2F1P35269 517 aaKnown RBP eCLIP6.21□□□□□ -1.42
U2AF1-207ENST00000468039 IARSP41252 1262 aaKnown RBP6.21□□□□□ -1.42
U2AF1-207ENST00000468039 NOP2P46087 812 aaKnown RBP6.21□□□□□ -1.42
U2AF1-207ENST00000468039 CCT4P50991 539 aaKnown RBP6.21□□□□□ -1.42
U2AF1-207ENST00000468039 ANKRD18AQ8IVF6 992 aa6.21□□□□□ -1.42
U2AF1-207ENST00000468039 KSR1Q8IVT5 923 aa6.21□□□□□ -1.42
U2AF1-207ENST00000468039 SP8Q8IXZ3 490 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms