RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 SMIM35A0A1B0GVV1 85 aa20.54■□□□□ 0.88
CGREF1-208ENST00000467539 GJB5O95377 273 aa20.54■□□□□ 0.88
CGREF1-208ENST00000467539 C8orf34Q49A92 452 aa20.54■□□□□ 0.88
CGREF1-208ENST00000467539 ZNF484Q5JVG2 852 aa20.54■□□□□ 0.88
CGREF1-208ENST00000467539 MTHFD1LQ6UB35 978 aa20.54■□□□□ 0.88
CGREF1-208ENST00000467539 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.54■□□□□ 0.88
CGREF1-208ENST00000467539 APBB2Q92870 758 aa20.54■□□□□ 0.88
CGREF1-208ENST00000467539 CDH23Q9H251 3354 aa20.54■□□□□ 0.88
CGREF1-208ENST00000467539 DTNBO60941 627 aa20.53■□□□□ 0.88
CGREF1-208ENST00000467539 LARGE1O95461 756 aa20.53■□□□□ 0.88
CGREF1-208ENST00000467539 KLRC1P26715 233 aa20.53■□□□□ 0.88
CGREF1-208ENST00000467539 IER5Q5VY09 327 aa20.53■□□□□ 0.88
CGREF1-208ENST00000467539 TRAPPC12Q8WVT3 735 aa20.53■□□□□ 0.88
CGREF1-208ENST00000467539 BBXQ8WY36 941 aaPredicted RBP20.53■□□□□ 0.88
CGREF1-208ENST00000467539 ZBTB10Q96DT7 871 aa20.53■□□□□ 0.88
CGREF1-208ENST00000467539 DISC1Q9NRI5 854 aa20.53■□□□□ 0.88
CGREF1-208ENST00000467539 GJB4Q9NTQ9 266 aa20.53■□□□□ 0.88
CGREF1-208ENST00000467539 SQORQ9Y6N5 450 aa20.53■□□□□ 0.88
CGREF1-208ENST00000467539 MYO9BQ13459 2157 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 COL1A2P08123 1366 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 WDR64B1ANS9 1081 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 RBAK-RBAKDNI3L0D1 243 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 PSMD10O75832 226 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 TDP2O95551 362 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 AMHP03971 560 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 MRPS6P82932 125 aaKnown RBP20.52■□□□□ 0.88
CGREF1-208ENST00000467539 TAP1Q03518 808 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 ADGRE1Q14246 886 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 INF2Q27J81 1249 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 LRCH2Q5VUJ6 765 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 TMCO2Q7Z6W1 182 aaPredicted RBP20.52■□□□□ 0.88
CGREF1-208ENST00000467539 NSUN7Q8NE18 718 aaKnown RBP20.52■□□□□ 0.88
CGREF1-208ENST00000467539 IFIH1Q9BYX4 1025 aaKnown RBP20.52■□□□□ 0.88
CGREF1-208ENST00000467539 GABBR1Q9UBS5 961 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 LIMCH1Q9UPQ0 1083 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 SAMM50Q9Y512 469 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 CDY2AQ9Y6F7 541 aa20.52■□□□□ 0.88
CGREF1-208ENST00000467539 CCDC194A0A1B0GVG4 234 aa20.51■□□□□ 0.87
CGREF1-208ENST00000467539 ZBTB42B2RXF5 422 aa20.51■□□□□ 0.87
CGREF1-208ENST00000467539 GAS7O60861 476 aa20.51■□□□□ 0.87
CGREF1-208ENST00000467539 SFNP31947 248 aa20.51■□□□□ 0.87
CGREF1-208ENST00000467539 LPIN1Q14693 890 aa20.51■□□□□ 0.87
CGREF1-208ENST00000467539 FBXO47Q5MNV8 452 aa20.51■□□□□ 0.87
CGREF1-208ENST00000467539 PPP4R3AQ6IN85 833 aa20.51■□□□□ 0.87
CGREF1-208ENST00000467539 B3GNT9Q6UX72 402 aa20.51■□□□□ 0.87
CGREF1-208ENST00000467539 CKAP2LQ8IYA6 745 aa20.51■□□□□ 0.87
CGREF1-208ENST00000467539 OXER1Q8TDS5 423 aa20.51■□□□□ 0.87
CGREF1-208ENST00000467539 TOP1MTQ969P6 601 aa20.51■□□□□ 0.87
CGREF1-208ENST00000467539 TEKT3Q9BXF9 490 aa20.51■□□□□ 0.87
CGREF1-208ENST00000467539 FAM49AQ9H0Q0 323 aaPredicted RBP20.51■□□□□ 0.87
CGREF1-208ENST00000467539 INSL6Q9Y581 213 aa20.51■□□□□ 0.87
CGREF1-208ENST00000467539 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.5■□□□□ 0.87
CGREF1-208ENST00000467539 GHRP10912 638 aa20.5■□□□□ 0.87
CGREF1-208ENST00000467539 JAK3P52333 1124 aa20.5■□□□□ 0.87
CGREF1-208ENST00000467539 KIAA0319LQ8IZA0 1049 aa20.5■□□□□ 0.87
CGREF1-208ENST00000467539 USP38Q8NB14 1042 aa20.5■□□□□ 0.87
CGREF1-208ENST00000467539 RDM1Q8NG50 284 aa20.5■□□□□ 0.87
CGREF1-208ENST00000467539 ETNPPLQ8TBG4 499 aa20.5■□□□□ 0.87
CGREF1-208ENST00000467539 KIF2CQ99661 725 aa20.5■□□□□ 0.87
CGREF1-208ENST00000467539 CELF4Q9BZC1 486 aaKnown RBP20.5■□□□□ 0.87
CGREF1-208ENST00000467539 UNC45AQ9H3U1 944 aa20.5■□□□□ 0.87
CGREF1-208ENST00000467539 NRBP2Q9NSY0 501 aa20.5■□□□□ 0.87
CGREF1-208ENST00000467539 DDX25Q9UHL0 483 aaKnown RBP20.5■□□□□ 0.87
CGREF1-208ENST00000467539 GBF1Q92538 1859 aa20.5■□□□□ 0.87
CGREF1-208ENST00000467539 ENPP3O14638 875 aa20.49■□□□□ 0.87
CGREF1-208ENST00000467539 ARHGEF15O94989 841 aa20.49■□□□□ 0.87
CGREF1-208ENST00000467539 POU3F3P20264 500 aaPredicted RBP20.49■□□□□ 0.87
CGREF1-208ENST00000467539 HTRA4P83105 476 aaPredicted RBP20.49■□□□□ 0.87
CGREF1-208ENST00000467539 LETM2Q2VYF4 491 aa20.49■□□□□ 0.87
CGREF1-208ENST00000467539 TSHZ1Q6ZSZ6 1077 aa20.49■□□□□ 0.87
CGREF1-208ENST00000467539 NEK8Q86SG6 692 aa20.49■□□□□ 0.87
CGREF1-208ENST00000467539 MYOCDQ8IZQ8 938 aa20.49■□□□□ 0.87
CGREF1-208ENST00000467539 GJA10Q969M2 543 aa20.49■□□□□ 0.87
CGREF1-208ENST00000467539 FAM167AQ96KS9 214 aa20.49■□□□□ 0.87
CGREF1-208ENST00000467539 FAM20AQ96MK3 541 aa20.49■□□□□ 0.87
CGREF1-208ENST00000467539 NAP1L4Q99733 375 aaKnown RBP20.49■□□□□ 0.87
CGREF1-208ENST00000467539 TRPV2Q9Y5S1 764 aa20.49■□□□□ 0.87
CGREF1-208ENST00000467539 KDM3AQ9Y4C1 1321 aa20.49■□□□□ 0.87
CGREF1-208ENST00000467539 A0A0C4DFX4 3053 aa20.48■□□□□ 0.87
CGREF1-208ENST00000467539 CHD7Q9P2D1 2997 aa20.48■□□□□ 0.87
CGREF1-208ENST00000467539 LCHNA4D1U4 455 aa20.48■□□□□ 0.87
CGREF1-208ENST00000467539 M0QZ92 97 aa20.48■□□□□ 0.87
CGREF1-208ENST00000467539 ZNF862O60290 1169 aa20.48■□□□□ 0.87
CGREF1-208ENST00000467539 GCFC2P16383 781 aaKnown RBP20.48■□□□□ 0.87
CGREF1-208ENST00000467539 IGFBP4P22692 258 aa20.48■□□□□ 0.87
CGREF1-208ENST00000467539 FAM117BQ6P1L5 589 aa20.48■□□□□ 0.87
CGREF1-208ENST00000467539 FAM43BQ6ZT52 329 aaPredicted RBP20.48■□□□□ 0.87
CGREF1-208ENST00000467539 PIK3AP1Q6ZUJ8 805 aa20.48■□□□□ 0.87
CGREF1-208ENST00000467539 AGO3Q9H9G7 860 aaKnown RBP20.48■□□□□ 0.87
CGREF1-208ENST00000467539 CEP131Q9UPN4 1083 aa20.48■□□□□ 0.87
CGREF1-208ENST00000467539 MAGEB2O15479 319 aa20.47■□□□□ 0.87
CGREF1-208ENST00000467539 JAK2O60674 1132 aa20.47■□□□□ 0.87
CGREF1-208ENST00000467539 KRT2P35908 639 aa20.47■□□□□ 0.87
CGREF1-208ENST00000467539 RBM25P49756 843 aaKnown RBP20.47■□□□□ 0.87
CGREF1-208ENST00000467539 MIER3Q7Z3K6 550 aa20.47■□□□□ 0.87
CGREF1-208ENST00000467539 ZSCAN31Q96LW9 406 aaPredicted RBP20.47■□□□□ 0.87
CGREF1-208ENST00000467539 CERS4Q9HA82 394 aa20.47■□□□□ 0.87
CGREF1-208ENST00000467539 BRMS1Q9HCU9 246 aa20.47■□□□□ 0.87
CGREF1-208ENST00000467539 KCNMB3Q9NPA1 279 aa20.47■□□□□ 0.87
CGREF1-208ENST00000467539 IGSF9BQ9UPX0 1349 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms