RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 PDE8BO95263 885 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 ECEL1O95672 775 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 CYP2B6P20813 491 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 HOXA7P31268 230 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-207ENST00000467273 ZNF76P36508 570 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 RTP1P59025 263 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 SNX17Q15036 470 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 C9orf50Q5SZB4 431 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 TREML2Q5T2D2 321 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 PEAR1Q5VY43 1037 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-207ENST00000467273 ZSWIM9Q86XI8 627 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 NT5DC4Q86YG4 428 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 FAM177A1Q8N128 213 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-207ENST00000467273 BHLHE22Q8NFJ8 381 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-207ENST00000467273 RNF34Q969K3 372 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 OSBPL5Q9H0X9 879 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-207ENST00000467273 ASCC2Q9H1I8 757 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-207ENST00000467273 METTL5Q9NRN9 209 aaKnown RBP6.74□□□□□ -1.33
PTCD3-207ENST00000467273 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.74□□□□□ -1.33
PTCD3-207ENST00000467273 VAV3Q9UKW4 847 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 CHD9Q3L8U1 2897 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 RLFQ13129 1914 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 NCANO14594 1321 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 UTYO14607 1347 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 SALL1Q9NSC2 1324 aa6.74□□□□□ -1.33
PTCD3-207ENST00000467273 RFX7Q2KHR2 1363 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-207ENST00000467273 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-207ENST00000467273 A0A1W2PP55 124 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 GRM8O00222 908 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 PRRG2O14669 202 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 GLRX3O76003 335 aaKnown RBP6.73□□□□□ -1.33
PTCD3-207ENST00000467273 USP17L7P0C7H9 530 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 CFPP27918 469 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 CCND3P30281 292 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-207ENST00000467273 ZEB1P37275 1124 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-207ENST00000467273 PRKCQQ04759 706 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 RAD51AP2Q09MP3 1159 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 GRM2Q14416 872 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 KCNMB1Q16558 191 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 AAK1Q2M2I8 961 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 MEI1Q5TIA1 1274 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 MFSD14CQ5VZR4 134 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 LRRC56Q8IYG6 542 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-207ENST00000467273 TSPYL6Q8N831 410 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 VGLL2Q8N8G2 317 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 USP38Q8NB14 1042 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 ARRDC4Q8NCT1 418 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 GPRC5AQ8NFJ5 357 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 RNPC3Q96LT9 517 aaKnown RBP6.73□□□□□ -1.33
PTCD3-207ENST00000467273 CLEC4MQ9H2X3 399 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-207ENST00000467273 ZNF576Q9H609 170 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 ZFYVE1Q9HBF4 777 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 USP40Q9NVE5 1235 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 DDX20Q9UHI6 824 aaKnown RBP6.73□□□□□ -1.33
PTCD3-207ENST00000467273 TACC3Q9Y6A5 838 aa6.73□□□□□ -1.33
PTCD3-207ENST00000467273 B8ZZF3 427 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 MAP4K4O95819 1239 aaPredicted RBP6.72□□□□□ -1.33
PTCD3-207ENST00000467273 HOXC6P09630 235 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 IFIT1P09914 478 aaKnown RBP6.72□□□□□ -1.33
PTCD3-207ENST00000467273 RGS3P49796 1198 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 IRX3P78415 501 aaPredicted RBP6.72□□□□□ -1.33
PTCD3-207ENST00000467273 SPP2Q13103 211 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 PUM3Q15397 648 aaKnown RBP6.72□□□□□ -1.33
PTCD3-207ENST00000467273 IFI16Q16666 785 aaKnown RBP6.72□□□□□ -1.33
PTCD3-207ENST00000467273 ZNF423Q2M1K9 1284 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 TWISTNBQ3B726 338 aaPredicted RBP6.72□□□□□ -1.33
PTCD3-207ENST00000467273 METTL24Q5JXM2 366 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 EPHA10Q5JZY3 1008 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 BEND3Q5T5X7 828 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 KIAA0319Q5VV43 1072 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 SLC39A5Q6ZMH5 540 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 LCNL1Q6ZST4 164 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 G2E3Q7L622 706 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 PLEKHH3Q7Z736 793 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 CILP2Q8IUL8 1156 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 CCAR1Q8IX12 1150 aaKnown RBP6.72□□□□□ -1.33
PTCD3-207ENST00000467273 ZGPATQ8N5A5 531 aaKnown RBP6.72□□□□□ -1.33
PTCD3-207ENST00000467273 BADQ92934 168 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 HRASLS5Q96KN8 279 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 WDR18Q9BV38 432 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 EHD4Q9H223 541 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 GSX1Q9H4S2 264 aaPredicted RBP6.72□□□□□ -1.33
PTCD3-207ENST00000467273 AS3MTQ9HBK9 375 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 PDLIM7Q9NR12 457 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 FAM8A1Q9UBU6 413 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 U3KQE9 123 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 GAKO14976 1311 aa6.72□□□□□ -1.33
PTCD3-207ENST00000467273 ATAD5Q96QE3 1844 aa6.71□□□□□ -1.33
PTCD3-207ENST00000467273 TRANK1O15050 2925 aa6.71□□□□□ -1.33
PTCD3-207ENST00000467273 A0A096LPE4 126 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 A0A1W2PPZ6 126 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 C19orf81C9J6K1 198 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 KBTBD13C9JR72 458 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 ALDH1L1O75891 902 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 FGFR2P21802 821 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 CAP2P40123 477 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 HMGCS2P54868 508 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 HERVK_113P62684 666 aa6.71□□□□□ -1.34
PTCD3-207ENST00000467273 ERVK-24P63145 666 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms