RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 DNAJC2Q99543 621 aaKnown RBP14.84□□□□□ -0.03
UBR4-210ENST00000466969 MTMR7Q9Y216 660 aa14.84□□□□□ -0.03
UBR4-210ENST00000466969 PCDHB7Q9Y5E2 793 aa14.84□□□□□ -0.03
UBR4-210ENST00000466969 DENND4AQ7Z401 1863 aa14.84□□□□□ -0.03
UBR4-210ENST00000466969 EIF3JO75822 258 aaKnown RBP14.83□□□□□ -0.04
UBR4-210ENST00000466969 CD52P31358 61 aa14.83□□□□□ -0.04
UBR4-210ENST00000466969 SLC16A2P36021 539 aa14.83□□□□□ -0.04
UBR4-210ENST00000466969 MGAT3Q09327 533 aa14.83□□□□□ -0.04
UBR4-210ENST00000466969 BMS1Q14692 1282 aaKnown RBP14.83□□□□□ -0.04
UBR4-210ENST00000466969 SLFNL1Q499Z3 407 aa14.83□□□□□ -0.04
UBR4-210ENST00000466969 PPP4R3BQ5MIZ7 849 aa14.83□□□□□ -0.04
UBR4-210ENST00000466969 CABP7Q86V35 215 aa14.83□□□□□ -0.04
UBR4-210ENST00000466969 NEDD1Q8NHV4 660 aa14.83□□□□□ -0.04
UBR4-210ENST00000466969 NELL1Q92832 810 aa14.83□□□□□ -0.04
UBR4-210ENST00000466969 NXPE3Q969Y0 559 aa14.83□□□□□ -0.04
UBR4-210ENST00000466969 FAM126AQ9BYI3 521 aaPredicted RBP14.83□□□□□ -0.04
UBR4-210ENST00000466969 ADAM33Q9BZ11 813 aa14.83□□□□□ -0.04
UBR4-210ENST00000466969 TYW1Q9NV66 732 aaKnown RBP14.83□□□□□ -0.04
UBR4-210ENST00000466969 MIA3Q5JRA6 1907 aa14.83□□□□□ -0.04
UBR4-210ENST00000466969 C2orf71A6NGG8 1288 aa14.82□□□□□ -0.04
UBR4-210ENST00000466969 GGPS1O95749 300 aa14.82□□□□□ -0.04
UBR4-210ENST00000466969 LGALS2P05162 132 aa14.82□□□□□ -0.04
UBR4-210ENST00000466969 GBP2P32456 591 aaPredicted RBP14.82□□□□□ -0.04
UBR4-210ENST00000466969 MAGEA9P43362 315 aa14.82□□□□□ -0.04
UBR4-210ENST00000466969 STARD6P59095 220 aa14.82□□□□□ -0.04
UBR4-210ENST00000466969 CELF3Q5SZQ8 465 aaKnown RBP14.82□□□□□ -0.04
UBR4-210ENST00000466969 SYDE2Q5VT97 1194 aa14.82□□□□□ -0.04
UBR4-210ENST00000466969 TAF2Q6P1X5 1199 aa14.82□□□□□ -0.04
UBR4-210ENST00000466969 CELF5Q8N6W0 485 aaKnown RBP14.82□□□□□ -0.04
UBR4-210ENST00000466969 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.82□□□□□ -0.048e-14■■■□□ 17.4
UBR4-210ENST00000466969 STX8Q9UNK0 236 aa14.82□□□□□ -0.04
UBR4-210ENST00000466969 NRCAMQ92823 1304 aa14.82□□□□□ -0.04
UBR4-210ENST00000466969 KCNK5O95279 499 aa14.81□□□□□ -0.04
UBR4-210ENST00000466969 PPM1AP35813 382 aa14.81□□□□□ -0.04
UBR4-210ENST00000466969 LIMK1P53667 647 aa14.81□□□□□ -0.04
UBR4-210ENST00000466969 ATP8B2P98198 1209 aa14.81□□□□□ -0.04
UBR4-210ENST00000466969 LETM2Q2VYF4 491 aa14.81□□□□□ -0.04
UBR4-210ENST00000466969 AASDHQ4L235 1098 aaPredicted RBP14.81□□□□□ -0.04
UBR4-210ENST00000466969 TSSK4Q6SA08 328 aa14.81□□□□□ -0.04
UBR4-210ENST00000466969 GPR149Q86SP6 731 aa14.81□□□□□ -0.04
UBR4-210ENST00000466969 AACSQ86V21 672 aa14.81□□□□□ -0.04
UBR4-210ENST00000466969 GLG1Q92896 1179 aa14.81□□□□□ -0.04
UBR4-210ENST00000466969 TAAR1Q96RJ0 339 aa14.81□□□□□ -0.04
UBR4-210ENST00000466969 MYL10Q9BUA6 226 aa14.81□□□□□ -0.04
UBR4-210ENST00000466969 TMEM121BQ9BXQ6 578 aaPredicted RBP14.81□□□□□ -0.04
UBR4-210ENST00000466969 AGO3Q9H9G7 860 aaKnown RBP14.81□□□□□ -0.04
UBR4-210ENST00000466969 MLXIPQ9HAP2 919 aa14.81□□□□□ -0.04
UBR4-210ENST00000466969 RALGAPA1Q6GYQ0 2036 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 KANSL1LA0AUZ9 987 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 FOXC1Q12948 553 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 POLA2Q14181 598 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 ARHGEF16Q5VV41 709 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 KCNV1Q6PIU1 500 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 RGS22Q8NE09 1264 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 LMBR1Q8WVP7 490 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 MAP4K1Q92918 833 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 RMDN3Q96TC7 470 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 USP26Q9BXU7 913 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 SFXN1Q9H9B4 322 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 HCSTQ9UBK5 93 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 SUPT16HQ9Y5B9 1047 aaKnown RBP14.8□□□□□ -0.04
UBR4-210ENST00000466969 CDY2AQ9Y6F7 541 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 CCDC171Q6TFL3 1326 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 PLIN4Q96Q06 1357 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 PATJQ8NI35 1801 aa14.8□□□□□ -0.04
UBR4-210ENST00000466969 DMXL2Q8TDJ6 3036 aa14.79□□□□□ -0.04
UBR4-210ENST00000466969 NOP56O00567 594 aaKnown RBP14.79□□□□□ -0.04
UBR4-210ENST00000466969 TM4SF5O14894 197 aa14.79□□□□□ -0.04
UBR4-210ENST00000466969 EPCAMP16422 314 aa14.79□□□□□ -0.04
UBR4-210ENST00000466969 SARSP49591 514 aaKnown RBP14.79□□□□□ -0.04
UBR4-210ENST00000466969 ADAM17P78536 824 aa14.79□□□□□ -0.04
UBR4-210ENST00000466969 TFAP4Q01664 338 aa14.79□□□□□ -0.04
UBR4-210ENST00000466969 UBXN2BQ14CS0 331 aa14.79□□□□□ -0.04
UBR4-210ENST00000466969 TTBK2Q6IQ55 1244 aa14.79□□□□□ -0.04
UBR4-210ENST00000466969 BTNL9Q6UXG8 535 aa14.79□□□□□ -0.04
UBR4-210ENST00000466969 DCAF4Q8WV16 495 aa14.79□□□□□ -0.04
UBR4-210ENST00000466969 ZNF215Q9UL58 517 aaPredicted RBP14.79□□□□□ -0.04
UBR4-210ENST00000466969 FNDC1Q4ZHG4 1894 aaPredicted RBP14.78□□□□□ -0.04
UBR4-210ENST00000466969 WDR19Q8NEZ3 1342 aa14.78□□□□□ -0.04
UBR4-210ENST00000466969 NCLP19338 710 aaKnown RBP14.78□□□□□ -0.04
UBR4-210ENST00000466969 SPINK2P20155 84 aa14.78□□□□□ -0.04
UBR4-210ENST00000466969 NRLP54845 237 aa14.78□□□□□ -0.04
UBR4-210ENST00000466969 PAK2Q13177 524 aa14.78□□□□□ -0.04
UBR4-210ENST00000466969 CCDC184Q52MB2 194 aa14.78□□□□□ -0.04
UBR4-210ENST00000466969 FAM102BQ5T8I3 360 aa14.78□□□□□ -0.04
UBR4-210ENST00000466969 PSAPL1Q6NUJ1 521 aa14.78□□□□□ -0.04
UBR4-210ENST00000466969 KCNT2Q6UVM3 1135 aa14.78□□□□□ -0.04
UBR4-210ENST00000466969 STAMQ92783 540 aa14.78□□□□□ -0.04
UBR4-210ENST00000466969 ZNF558Q96NG5 402 aa14.78□□□□□ -0.04
UBR4-210ENST00000466969 OSBPL6Q9BZF3 934 aa14.78□□□□□ -0.04
UBR4-210ENST00000466969 CWH43Q9H720 699 aa14.78□□□□□ -0.04
UBR4-210ENST00000466969 SLC2A4RGQ9NR83 387 aa14.78□□□□□ -0.04
UBR4-210ENST00000466969 KAT6AQ92794 2004 aa14.77□□□□□ -0.04
UBR4-210ENST00000466969 FRMPD2Q68DX3 1309 aaPredicted RBP14.77□□□□□ -0.04
UBR4-210ENST00000466969 FAM170BA6NMN3 283 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 CXCL14O95715 111 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 EIF2AK2P19525 551 aaKnown RBP14.77□□□□□ -0.05
UBR4-210ENST00000466969 PDE4AP27815 886 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 UBE3CQ15386 1083 aa14.77□□□□□ -0.05
UBR4-210ENST00000466969 USH1GQ495M9 461 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms