RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 PRKCEQ02156 737 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 CYP4A11Q02928 519 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 MFSD10Q14728 455 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 XKR3Q5GH77 459 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 RESP18Q5W5W9 173 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 NFRKBQ6P4R8 1299 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 SHC4Q6S5L8 630 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 BANK1Q8NDB2 785 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 BBXQ8WY36 941 aaPredicted RBP17.01■□□□□ 0.31
NPHP4-205ENST00000466897 WRAP73Q9P2S5 460 aaPredicted RBP17.01■□□□□ 0.31
NPHP4-205ENST00000466897 PPME1Q9Y570 386 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 COL1A2P08123 1366 aa17.01■□□□□ 0.31
NPHP4-205ENST00000466897 TRIP12Q14669 1992 aaPredicted RBP17■□□□□ 0.31
NPHP4-205ENST00000466897 HBP1O60381 514 aa17■□□□□ 0.31
NPHP4-205ENST00000466897 STBD1O95210 358 aa17■□□□□ 0.31
NPHP4-205ENST00000466897 MYCNP04198 464 aaPredicted RBP17■□□□□ 0.31
NPHP4-205ENST00000466897 CDC25AP30304 524 aa17■□□□□ 0.31
NPHP4-205ENST00000466897 HOXC8P31273 242 aa17■□□□□ 0.31
NPHP4-205ENST00000466897 PTPN11Q06124 597 aaPredicted RBP17■□□□□ 0.31
NPHP4-205ENST00000466897 CTTNQ14247 550 aaKnown RBP17■□□□□ 0.31
NPHP4-205ENST00000466897 PLCB4Q15147 1175 aa17■□□□□ 0.31
NPHP4-205ENST00000466897 KIAA0753Q2KHM9 967 aa17■□□□□ 0.31
NPHP4-205ENST00000466897 TMEM119Q4V9L6 283 aa17■□□□□ 0.31
NPHP4-205ENST00000466897 UBE2Q1Q7Z7E8 422 aa17■□□□□ 0.31
NPHP4-205ENST00000466897 TPH2Q8IWU9 490 aa17■□□□□ 0.31
NPHP4-205ENST00000466897 SLC43A3Q8NBI5 491 aa17■□□□□ 0.31
NPHP4-205ENST00000466897 CALML4Q96GE6 196 aa17■□□□□ 0.31
NPHP4-205ENST00000466897 EPSTI1Q96J88 318 aa17■□□□□ 0.31
NPHP4-205ENST00000466897 PYM1Q9BRP8 204 aaKnown RBP17■□□□□ 0.31
NPHP4-205ENST00000466897 NIFKQ9BYG3 293 aaKnown RBP17■□□□□ 0.31
NPHP4-205ENST00000466897 CCDC39Q9UFE4 941 aa17■□□□□ 0.31
NPHP4-205ENST00000466897 POTEB3A0JP26 581 aa16.99■□□□□ 0.31
NPHP4-205ENST00000466897 GRB10Q13322 594 aa16.99■□□□□ 0.31
NPHP4-205ENST00000466897 C1orf53Q5VUE5 145 aa16.99■□□□□ 0.31
NPHP4-205ENST00000466897 POTEBQ6S5H4 581 aa16.99■□□□□ 0.31
NPHP4-205ENST00000466897 USP49Q70CQ1 688 aa16.99■□□□□ 0.31
NPHP4-205ENST00000466897 PNMA5Q96PV4 448 aa16.99■□□□□ 0.31
NPHP4-205ENST00000466897 NACC1Q96RE7 527 aa16.99■□□□□ 0.31
NPHP4-205ENST00000466897 RNPEPQ9H4A4 650 aa16.99■□□□□ 0.31
NPHP4-205ENST00000466897 STARD7Q9NQZ5 370 aa16.99■□□□□ 0.31
NPHP4-205ENST00000466897 NRBP2Q9NSY0 501 aa16.99■□□□□ 0.31
NPHP4-205ENST00000466897 ANKEF1Q9NU02 776 aa16.99■□□□□ 0.31
NPHP4-205ENST00000466897 FAM13BQ9NYF5 915 aa16.99■□□□□ 0.31
NPHP4-205ENST00000466897 DBR1Q9UK59 544 aaKnown RBP16.99■□□□□ 0.31
NPHP4-205ENST00000466897 A0A0U1RQG5 324 aaPredicted RBP16.98■□□□□ 0.31
NPHP4-205ENST00000466897 YWHABP31946 246 aaKnown RBP16.98■□□□□ 0.31
NPHP4-205ENST00000466897 ITGA7Q13683 1181 aa16.98■□□□□ 0.31
NPHP4-205ENST00000466897 SNX17Q15036 470 aa16.98■□□□□ 0.31
NPHP4-205ENST00000466897 ECM1Q16610 540 aa16.98■□□□□ 0.31
NPHP4-205ENST00000466897 SPECC1Q5M775 1068 aa16.98■□□□□ 0.31
NPHP4-205ENST00000466897 POTEGQ6S5H5 508 aa16.98■□□□□ 0.31
NPHP4-205ENST00000466897 CCDC73Q6ZRK6 1079 aa16.98■□□□□ 0.31
NPHP4-205ENST00000466897 ANO5Q75V66 913 aa16.98■□□□□ 0.31
NPHP4-205ENST00000466897 OTUD6AQ7L8S5 288 aa16.98■□□□□ 0.31
NPHP4-205ENST00000466897 CKAP2LQ8IYA6 745 aa16.98■□□□□ 0.31
NPHP4-205ENST00000466897 MRPS27Q92552 414 aaKnown RBP16.98■□□□□ 0.31
NPHP4-205ENST00000466897 CDK5RAP3Q96JB5 506 aa16.98■□□□□ 0.31
NPHP4-205ENST00000466897 DDX19AQ9NUU7 478 aaKnown RBP16.98■□□□□ 0.31
NPHP4-205ENST00000466897 STK17AQ9UEE5 414 aa16.98■□□□□ 0.31
NPHP4-205ENST00000466897 KIAA1024Q9UPX6 916 aa16.98■□□□□ 0.31
NPHP4-205ENST00000466897 HPSEQ9Y251 543 aa16.98■□□□□ 0.31
NPHP4-205ENST00000466897 ALPK3Q96L96 1907 aa16.98■□□□□ 0.31
NPHP4-205ENST00000466897 EVPLQ92817 2033 aa16.97■□□□□ 0.31
NPHP4-205ENST00000466897 GRIN2DO15399 1336 aa16.97■□□□□ 0.31
NPHP4-205ENST00000466897 NRCAMQ92823 1304 aa16.97■□□□□ 0.31
NPHP4-205ENST00000466897 GOLGA6L4A6NEF3 574 aa16.97■□□□□ 0.31
NPHP4-205ENST00000466897 RRN3P2A6NIE6 340 aa16.97■□□□□ 0.31
NPHP4-205ENST00000466897 EN2P19622 333 aaPredicted RBP16.97■□□□□ 0.31
NPHP4-205ENST00000466897 MARK3P27448 753 aa16.97■□□□□ 0.31
NPHP4-205ENST00000466897 KARSQ15046 597 aaKnown RBP16.97■□□□□ 0.31
NPHP4-205ENST00000466897 TARBP2Q15633 366 aaKnown RBP16.97■□□□□ 0.31
NPHP4-205ENST00000466897 NBPF20Q3BBV1 942 aa16.97■□□□□ 0.31
NPHP4-205ENST00000466897 ZNF484Q5JVG2 852 aa16.97■□□□□ 0.31
NPHP4-205ENST00000466897 NECAB2Q7Z6G3 386 aa16.97■□□□□ 0.31
NPHP4-205ENST00000466897 C11orf49Q9H6J7 331 aa16.97■□□□□ 0.31
NPHP4-205ENST00000466897 GTF2IRD1Q9UHL9 959 aa16.97■□□□□ 0.31
NPHP4-205ENST00000466897 TRPC6Q9Y210 931 aa16.97■□□□□ 0.31
NPHP4-205ENST00000466897 DNAH12Q6ZR08 3092 aa16.97■□□□□ 0.31
NPHP4-205ENST00000466897 MYH11P35749 1972 aa16.97■□□□□ 0.31
NPHP4-205ENST00000466897 MROH7Q68CQ1 1323 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 ZBTB42B2RXF5 422 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 GOLGA6L22H0YM25 854 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 ARVCFO00192 962 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 EYA4O95677 639 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 SMIM10L2AP0DMW4 78 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 SMIM10L2BP0DMW5 78 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 GNAT1P11488 350 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 PLCG1P19174 1290 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 RARRES1P49788 294 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 CDK7P50613 346 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 UBE2HP62256 183 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 PSMC6P62333 389 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 ADAM17P78536 824 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 EXOC8Q8IYI6 725 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 C7orf31Q8N865 590 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 RASSF8Q8NHQ8 419 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 DIS3LQ8TF46 1054 aaKnown RBP16.96■□□□□ 0.31
NPHP4-205ENST00000466897 CEP89Q96ST8 783 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 CUEDC2Q9H467 287 aa16.96■□□□□ 0.31
NPHP4-205ENST00000466897 SEPT9Q9UHD8 586 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms