RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 RPL13P26373 211 aaKnown RBP22.6■■□□□ 1.21
CCDC78-207ENST00000466708 CCND2P30279 289 aa22.6■■□□□ 1.21
CCDC78-207ENST00000466708 HNRNPH3P31942 346 aaKnown RBP22.6■■□□□ 1.21
CCDC78-207ENST00000466708 HOXD13P35453 343 aa22.6■■□□□ 1.21
CCDC78-207ENST00000466708 FRMD5Q7Z6J6 570 aa22.6■■□□□ 1.21
CCDC78-207ENST00000466708 PRPF6O94906 941 aaKnown RBP22.59■■□□□ 1.21
CCDC78-207ENST00000466708 CYLC1P35663 651 aaPredicted RBP22.59■■□□□ 1.21
CCDC78-207ENST00000466708 TMEM132BQ14DG7 1078 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 ARHGAP29Q52LW3 1261 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 VSIG10LQ86VR7 867 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 GPRASP2Q96D09 838 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 ERO1AQ96HE7 468 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 MMRN2Q9H8L6 949 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 PKD2L1Q9P0L9 805 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 RNF181Q9P0P0 153 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 PLAGL2Q9UPG8 496 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 PPP1R12BO60237 982 aaPredicted RBP22.59■■□□□ 1.21
CCDC78-207ENST00000466708 KIF5CO60282 957 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 SFNP31947 248 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 QARSP47897 775 aaKnown RBP22.59■■□□□ 1.21
CCDC78-207ENST00000466708 JAK3P52333 1124 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 KRT76Q01546 638 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.59■■□□□ 1.21
CCDC78-207ENST00000466708 SULF1Q8IWU6 871 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 ACRBPQ8NEB7 543 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 ACAD9Q9H845 621 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 LZTFL1Q9NQ48 299 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 TCEAL9Q9UHQ7 104 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 SNCAIPQ9Y6H5 919 aa22.59■■□□□ 1.21
CCDC78-207ENST00000466708 NR3C2P08235 984 aa22.58■■□□□ 1.21
CCDC78-207ENST00000466708 KRT83P78385 493 aa22.58■■□□□ 1.21
CCDC78-207ENST00000466708 NFIL3Q16649 462 aa22.58■■□□□ 1.21
CCDC78-207ENST00000466708 MTERF4Q7Z6M4 381 aaKnown RBP22.58■■□□□ 1.21
CCDC78-207ENST00000466708 NLRX1Q86UT6 975 aa22.58■■□□□ 1.21
CCDC78-207ENST00000466708 RDM1Q8NG50 284 aa22.58■■□□□ 1.21
CCDC78-207ENST00000466708 NEK11Q8NG66 645 aa22.58■■□□□ 1.21
CCDC78-207ENST00000466708 NSUN6Q8TEA1 469 aaKnown RBP22.58■■□□□ 1.21
CCDC78-207ENST00000466708 TSC1Q92574 1164 aa22.58■■□□□ 1.21
CCDC78-207ENST00000466708 FAM207AQ9NSI2 230 aaPredicted RBP22.58■■□□□ 1.21
CCDC78-207ENST00000466708 MYO1AQ9UBC5 1043 aa22.58■■□□□ 1.21
CCDC78-207ENST00000466708 SAMM50Q9Y512 469 aa22.58■■□□□ 1.21
CCDC78-207ENST00000466708 SPDYE16A6NNV3 312 aaPredicted RBP22.57■■□□□ 1.2
CCDC78-207ENST00000466708 SFI1A8K8P3 1242 aa22.57■■□□□ 1.2
CCDC78-207ENST00000466708 SLC16A3O15427 465 aaKnown RBP22.57■■□□□ 1.2
CCDC78-207ENST00000466708 PRKG1Q13976 671 aa22.57■■□□□ 1.2
CCDC78-207ENST00000466708 VGLL4Q14135 290 aa22.57■■□□□ 1.2
CCDC78-207ENST00000466708 WDR24Q96S15 920 aa22.57■■□□□ 1.2
CCDC78-207ENST00000466708 METTL14Q9HCE5 456 aaKnown RBP22.57■■□□□ 1.2
CCDC78-207ENST00000466708 ZNF215Q9UL58 517 aaPredicted RBP22.57■■□□□ 1.2
CCDC78-207ENST00000466708 CSADQ9Y600 493 aa22.57■■□□□ 1.2
CCDC78-207ENST00000466708 ASTN1O14525 1302 aa22.57■■□□□ 1.2
CCDC78-207ENST00000466708 TESPA1A2RU30 521 aaPredicted RBP22.57■■□□□ 1.2
CCDC78-207ENST00000466708 ZNF720Q7Z2F6 126 aa22.57■■□□□ 1.2
CCDC78-207ENST00000466708 FAM178BQ8IXR5 827 aa22.57■■□□□ 1.2
CCDC78-207ENST00000466708 WDR90Q96KV7 1748 aa22.57■■□□□ 1.2
CCDC78-207ENST00000466708 NUCKS1Q9H1E3 243 aaKnown RBP22.57■■□□□ 1.2
CCDC78-207ENST00000466708 ARMCX3Q9UH62 379 aaPredicted RBP22.57■■□□□ 1.2
CCDC78-207ENST00000466708 PCDHB13Q9Y5F0 798 aa22.57■■□□□ 1.2
CCDC78-207ENST00000466708 WDR64B1ANS9 1081 aa22.56■■□□□ 1.2
CCDC78-207ENST00000466708 FANCGO15287 622 aa22.56■■□□□ 1.2
CCDC78-207ENST00000466708 STAM2O75886 525 aa22.56■■□□□ 1.2
CCDC78-207ENST00000466708 URI1O94763 535 aaPredicted RBP22.56■■□□□ 1.2
CCDC78-207ENST00000466708 NR3C1P04150 777 aa22.56■■□□□ 1.2
CCDC78-207ENST00000466708 KCNMA1Q12791 1236 aa22.56■■□□□ 1.2
CCDC78-207ENST00000466708 PADI6Q6TGC4 694 aa22.56■■□□□ 1.2
CCDC78-207ENST00000466708 ZNF662Q6ZS27 426 aa22.56■■□□□ 1.2
CCDC78-207ENST00000466708 C4orf19Q8IY42 314 aa22.56■■□□□ 1.2
CCDC78-207ENST00000466708 INPP4AQ96PE3 977 aaPredicted RBP22.56■■□□□ 1.2
CCDC78-207ENST00000466708 FIZ1Q96SL8 496 aa22.56■■□□□ 1.2
CCDC78-207ENST00000466708 NHEJ1Q9H9Q4 299 aaPredicted RBP22.56■■□□□ 1.2
CCDC78-207ENST00000466708 CYP39A1Q9NYL5 469 aa22.56■■□□□ 1.2
CCDC78-207ENST00000466708 IPO7O95373 1038 aaKnown RBP22.55■■□□□ 1.2
CCDC78-207ENST00000466708 ODR4Q5SWX8 454 aa22.55■■□□□ 1.2
CCDC78-207ENST00000466708 MAP7D2Q96T17 732 aa22.55■■□□□ 1.2
CCDC78-207ENST00000466708 SENP7Q9BQF6 1050 aa22.55■■□□□ 1.2
CCDC78-207ENST00000466708 TIPINQ9BVW5 301 aa22.55■■□□□ 1.2
CCDC78-207ENST00000466708 HAUS4Q9H6D7 363 aa22.55■■□□□ 1.2
CCDC78-207ENST00000466708 MYH11P35749 1972 aa22.55■■□□□ 1.2
CCDC78-207ENST00000466708 EIF3CLB5ME19 914 aaKnown RBP22.54■■□□□ 1.2
CCDC78-207ENST00000466708 MAPTP10636 758 aaKnown RBP22.54■■□□□ 1.2
CCDC78-207ENST00000466708 ERCC3P19447 782 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 NMT1P30419 496 aaKnown RBP22.54■■□□□ 1.2
CCDC78-207ENST00000466708 IREB2P48200 963 aaKnown RBP22.54■■□□□ 1.2
CCDC78-207ENST00000466708 PSMC5P62195 406 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 ZNF746Q6NUN9 644 aaPredicted RBP22.54■■□□□ 1.2
CCDC78-207ENST00000466708 CHST13Q8NET6 341 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 SMCR8Q8TEV9 937 aaPredicted RBP22.54■■□□□ 1.2
CCDC78-207ENST00000466708 ANKRD7Q92527 254 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 CDHR1Q96JP9 859 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 EIF3CQ99613 913 aaKnown RBP22.54■■□□□ 1.2
CCDC78-207ENST00000466708 POLD4Q9HCU8 107 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 CEP72Q9P209 647 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 EPHB6O15197 1021 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 ATP9AO75110 1047 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 HIP1RO75146 1068 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 EPB41P11171 864 aaKnown RBP22.54■■□□□ 1.2
CCDC78-207ENST00000466708 RARRES1P49788 294 aa22.54■■□□□ 1.2
CCDC78-207ENST00000466708 RBM10P98175 930 aaKnown RBP22.54■■□□□ 1.2
CCDC78-207ENST00000466708 NCBP1Q09161 790 aaKnown RBP22.54■■□□□ 1.2
CCDC78-207ENST00000466708 KCNH2Q12809 1159 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms