RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 ZNF862O60290 1169 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 NEMFO60524 1076 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 STBD1O95210 358 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 RPLP2P05387 115 aaKnown RBP10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 SELPP16109 830 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 MARK3P27448 753 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 TOB1P50616 345 aaPredicted RBP10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 CCL23P55773 120 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 SHHQ15465 462 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 ZNF484Q5JVG2 852 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 C9orf50Q5SZB4 431 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 PSRC1Q6PGN9 363 aaPredicted RBP10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 LRRC8DQ7L1W4 858 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 RPUSD2Q8IZ73 545 aaKnown RBP10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 C4orf32Q8N8J7 132 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 RETREG2Q8NC44 543 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 BBXQ8WY36 941 aaPredicted RBP10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 HERVK_113Q902F9 699 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 FAM167AQ96KS9 214 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 GABBR1Q9UBS5 961 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 PCDHA2Q9Y5H9 948 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 SIP14410 1827 aa10.68□□□□□ -0.7
SDCCAG3-208ENST00000466579 EML1O00423 815 aa10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 BAG4O95429 457 aaKnown RBP10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 MBTPS1Q14703 1052 aa10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 EPHA7Q15375 998 aa10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 TARBP2Q15633 366 aaKnown RBP10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 CALCRLQ16602 461 aa10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 UGCGQ16739 394 aa10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 ZNF618Q5T7W0 954 aa10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 RUFY4Q6ZNE9 571 aa10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 MIER3Q7Z3K6 550 aa10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 SCLYQ96I15 445 aa10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 CEP89Q96ST8 783 aa10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 NIFKQ9BYG3 293 aaKnown RBP10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 TMEM60Q9H2L4 133 aa10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 TUBE1Q9UJT0 475 aa10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 TRPC6Q9Y210 931 aa10.67□□□□□ -0.7
SDCCAG3-208ENST00000466579 SMIM35A0A1B0GVV1 85 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 CHMP2AO43633 222 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 NBNO60934 754 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 OATP04181 439 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 PDCP20941 246 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 FXR1P51114 621 aaKnown RBP eCLIP10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 PSMC5P62195 406 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 PRKCEQ02156 737 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 MGAT3Q09327 533 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 TTC38Q5R3I4 469 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 LARP1BQ659C4 914 aaKnown RBP10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 MTHFD1LQ6UB35 978 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 ZNF365Q70YC5 407 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 LINC01465Q8N7H1 131 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 NRBP2Q9NSY0 501 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 NOL7Q9UMY1 257 aaKnown RBP10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 CEP131Q9UPN4 1083 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 SAMM50Q9Y512 469 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 EVPLQ92817 2033 aa10.66□□□□□ -0.7
SDCCAG3-208ENST00000466579 KDM3AQ9Y4C1 1321 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 RSPH10B2B2RC85 870 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 H3BQV1 296 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 LYPLA2O95372 231 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 C22orf31O95567 290 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 FGBP02675 491 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 P4HBP07237 508 aaKnown RBP10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 RSPH10BP0C881 870 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 ACRP10323 421 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 KLRC1P26715 233 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 MCM7P33993 719 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 THPOP40225 353 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 QARSP47897 775 aaKnown RBP10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 MKRN4PQ13434 485 aaPredicted RBP10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 ZNF174Q15697 407 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 RILPL1Q5EBL4 403 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 XKR3Q5GH77 459 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 GPR153Q6NV75 609 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 C4orf19Q8IY42 314 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 NME8Q8N427 588 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 NEK9Q8TD19 979 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 TRAPPC12Q8WVT3 735 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 HSD17B14Q9BPX1 270 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 TTC12Q9H892 705 aaPredicted RBP10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 PCDHA12Q9UN75 941 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 PPME1Q9Y570 386 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 SQORQ9Y6N5 450 aa10.65□□□□□ -0.7
SDCCAG3-208ENST00000466579 ARID2Q68CP9 1835 aa10.64□□□□□ -0.71
SDCCAG3-208ENST00000466579 IGKV6-21A0A0C4DH24 114 aa10.64□□□□□ -0.71
SDCCAG3-208ENST00000466579 LAD1O00515 517 aa10.64□□□□□ -0.71
SDCCAG3-208ENST00000466579 SOX1O00570 391 aaPredicted RBP10.64□□□□□ -0.71
SDCCAG3-208ENST00000466579 MAGEB2O15479 319 aa10.64□□□□□ -0.71
SDCCAG3-208ENST00000466579 DKC1O60832 514 aaKnown RBP eCLIP10.64□□□□□ -0.71
SDCCAG3-208ENST00000466579 BAIAP3O94812 1187 aa10.64□□□□□ -0.71
SDCCAG3-208ENST00000466579 SLITRK3O94933 977 aa10.64□□□□□ -0.71
SDCCAG3-208ENST00000466579 CHRNA1P02708 482 aa10.64□□□□□ -0.71
SDCCAG3-208ENST00000466579 OR52Z1P0C646 297 aa10.64□□□□□ -0.71
SDCCAG3-208ENST00000466579 SYT1P21579 422 aa10.64□□□□□ -0.71
SDCCAG3-208ENST00000466579 PRPHP41219 470 aa10.64□□□□□ -0.71
SDCCAG3-208ENST00000466579 FXR2P51116 673 aaKnown RBP eCLIP10.64□□□□□ -0.71
SDCCAG3-208ENST00000466579 IGBP1P78318 339 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms