RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 IGSF9BQ9UPX0 1349 aa16.64■□□□□ 0.26
CXCR4-203ENST00000466288 FSD2A1L4K1 749 aa16.64■□□□□ 0.25
CXCR4-203ENST00000466288 PRR23AA6NEV1 266 aa16.64■□□□□ 0.25
CXCR4-203ENST00000466288 INSRRP14616 1297 aa16.64■□□□□ 0.25
CXCR4-203ENST00000466288 TMEM62Q0P6H9 643 aa16.64■□□□□ 0.25
CXCR4-203ENST00000466288 SYCE2Q6PIF2 218 aa16.64■□□□□ 0.25
CXCR4-203ENST00000466288 USP17L6PQ6QN14 398 aa16.64■□□□□ 0.25
CXCR4-203ENST00000466288 GLG1Q92896 1179 aa16.64■□□□□ 0.25
CXCR4-203ENST00000466288 SMARCAD1Q9H4L7 1026 aa16.64■□□□□ 0.25
CXCR4-203ENST00000466288 PCDHB12Q9Y5F1 795 aa16.64■□□□□ 0.25
CXCR4-203ENST00000466288 KIAA1671Q9BY89 1806 aa16.64■□□□□ 0.25
CXCR4-203ENST00000466288 DOCK5Q9H7D0 1870 aa16.63■□□□□ 0.25
CXCR4-203ENST00000466288 RRN3P2A6NIE6 340 aa16.63■□□□□ 0.25
CXCR4-203ENST00000466288 PIK3CDO00329 1044 aa16.63■□□□□ 0.25
CXCR4-203ENST00000466288 MEIS2O14770 477 aa16.63■□□□□ 0.25
CXCR4-203ENST00000466288 FSCN2O14926 492 aa16.63■□□□□ 0.25
CXCR4-203ENST00000466288 FGF18O76093 207 aa16.63■□□□□ 0.25
CXCR4-203ENST00000466288 NBL1P41271 181 aa16.63■□□□□ 0.25
CXCR4-203ENST00000466288 TROAPQ12815 778 aa16.63■□□□□ 0.25
CXCR4-203ENST00000466288 PAK2Q13177 524 aa16.63■□□□□ 0.25
CXCR4-203ENST00000466288 ANKRD54Q6NXT1 300 aa16.63■□□□□ 0.25
CXCR4-203ENST00000466288 GPRASP2Q96D09 838 aa16.63■□□□□ 0.25
CXCR4-203ENST00000466288 LNPKQ9C0E8 428 aa16.63■□□□□ 0.25
CXCR4-203ENST00000466288 SENP2Q9HC62 589 aa16.63■□□□□ 0.25
CXCR4-203ENST00000466288 LRFN2Q9ULH4 789 aa16.63■□□□□ 0.25
CXCR4-203ENST00000466288 ITGB5P18084 799 aa16.62■□□□□ 0.25
CXCR4-203ENST00000466288 SARSP49591 514 aaKnown RBP16.62■□□□□ 0.25
CXCR4-203ENST00000466288 HDAC1Q13547 482 aaPredicted RBP16.62■□□□□ 0.25
CXCR4-203ENST00000466288 PDE12Q6L8Q7 609 aaKnown RBP16.62■□□□□ 0.25
CXCR4-203ENST00000466288 ZBTB33Q86T24 672 aa16.62■□□□□ 0.25
CXCR4-203ENST00000466288 TMEM105Q8N8V8 129 aa16.62■□□□□ 0.25
CXCR4-203ENST00000466288 KREMEN2Q8NCW0 462 aa16.62■□□□□ 0.25
CXCR4-203ENST00000466288 SMARCC2Q8TAQ2 1214 aa16.62■□□□□ 0.25
CXCR4-203ENST00000466288 RASGRP4Q8TDF6 673 aa16.62■□□□□ 0.25
CXCR4-203ENST00000466288 PCYT2Q99447 389 aa16.62■□□□□ 0.25
CXCR4-203ENST00000466288 CELF4Q9BZC1 486 aaKnown RBP16.62■□□□□ 0.25
CXCR4-203ENST00000466288 HCSTQ9UBK5 93 aa16.62■□□□□ 0.25
CXCR4-203ENST00000466288 TRPC6Q9Y210 931 aa16.62■□□□□ 0.25
CXCR4-203ENST00000466288 WDR87Q6ZQQ6 2873 aa16.62■□□□□ 0.25
CXCR4-203ENST00000466288 DNAH14Q0VDD8 3507 aa16.62■□□□□ 0.25
CXCR4-203ENST00000466288 KDM3AQ9Y4C1 1321 aa16.62■□□□□ 0.25
CXCR4-203ENST00000466288 M0QZ92 97 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 MGEA5O60502 916 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 SP100P23497 879 aaPredicted RBP16.61■□□□□ 0.25
CXCR4-203ENST00000466288 TECP42680 631 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 TMEM266Q2M3C6 531 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 SPOUT1Q5T280 376 aaKnown RBP16.61■□□□□ 0.25
CXCR4-203ENST00000466288 PIBF1Q8WXW3 757 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 CDHR1Q96JP9 859 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 APOL5Q9BWW9 433 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 AAASQ9NRG9 546 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 DIAPH3Q9NSV4 1193 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 PCDHB7Q9Y5E2 793 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 PCDHA2Q9Y5H9 948 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 PLXNA4Q9HCM2 1894 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 DMXL1Q9Y485 3027 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 RIF1Q5UIP0 2472 aaKnown RBP16.61■□□□□ 0.25
CXCR4-203ENST00000466288 TBKBP1A7MCY6 615 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 BRD1O95696 1058 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 FAM102BQ5T8I3 360 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 ERMP1Q7Z2K6 904 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 UBALD2Q8IYN6 164 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 COLGALT1Q8NBJ5 622 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 TRAPPC12Q8WVT3 735 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 CUL5Q93034 780 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 TYW1Q9NV66 732 aaKnown RBP16.61■□□□□ 0.25
CXCR4-203ENST00000466288 TMEM260Q9NX78 707 aa16.61■□□□□ 0.25
CXCR4-203ENST00000466288 SRGAP2BP0DMP2 458 aa16.6■□□□□ 0.25
CXCR4-203ENST00000466288 IBSPP21815 317 aaPredicted RBP16.6■□□□□ 0.25
CXCR4-203ENST00000466288 APOBRQ0VD83 1088 aa16.6■□□□□ 0.25
CXCR4-203ENST00000466288 NFX1Q12986 1120 aaKnown RBP16.6■□□□□ 0.25
CXCR4-203ENST00000466288 PLPP4Q5VZY2 271 aa16.6■□□□□ 0.25
CXCR4-203ENST00000466288 THNSL1Q8IYQ7 743 aa16.6■□□□□ 0.25
CXCR4-203ENST00000466288 IL25Q9H293 177 aa16.6■□□□□ 0.25
CXCR4-203ENST00000466288 CWH43Q9H720 699 aa16.6■□□□□ 0.25
CXCR4-203ENST00000466288 ERVK-5Q9HDB9 667 aa16.6■□□□□ 0.25
CXCR4-203ENST00000466288 PKD2L1Q9P0L9 805 aa16.6■□□□□ 0.25
CXCR4-203ENST00000466288 CDH22Q9UJ99 828 aa16.6■□□□□ 0.25
CXCR4-203ENST00000466288 SORCS3Q9UPU3 1222 aa16.6■□□□□ 0.25
CXCR4-203ENST00000466288 LZTS1Q9Y250 596 aa16.6■□□□□ 0.25
CXCR4-203ENST00000466288 UBIAD1Q9Y5Z9 338 aa16.6■□□□□ 0.25
CXCR4-203ENST00000466288 BAZ2BQ9UIF8 2168 aaKnown RBP16.59■□□□□ 0.25
CXCR4-203ENST00000466288 KAT6AQ92794 2004 aa16.59■□□□□ 0.25
CXCR4-203ENST00000466288 SMIM35A0A1B0GVV1 85 aa16.59■□□□□ 0.25
CXCR4-203ENST00000466288 HIDE1A8MVS5 230 aa16.59■□□□□ 0.25
CXCR4-203ENST00000466288 IFIT3O14879 490 aaKnown RBP16.59■□□□□ 0.25
CXCR4-203ENST00000466288 HOXB8P17481 243 aaPredicted RBP16.59■□□□□ 0.25
CXCR4-203ENST00000466288 KRT76Q01546 638 aa16.59■□□□□ 0.25
CXCR4-203ENST00000466288 MTMR1Q13613 665 aa16.59■□□□□ 0.25
CXCR4-203ENST00000466288 MTMR3Q13615 1198 aa16.59■□□□□ 0.25
CXCR4-203ENST00000466288 LLGL2Q6P1M3 1020 aa16.59■□□□□ 0.25
CXCR4-203ENST00000466288 NME8Q8N427 588 aa16.59■□□□□ 0.25
CXCR4-203ENST00000466288 OSBPL3Q9H4L5 887 aa16.59■□□□□ 0.25
CXCR4-203ENST00000466288 TSHZ2Q9NRE2 1034 aa16.59■□□□□ 0.25
CXCR4-203ENST00000466288 RGS18Q9NS28 235 aa16.59■□□□□ 0.25
CXCR4-203ENST00000466288 NR2E1Q9Y466 385 aa16.59■□□□□ 0.25
CXCR4-203ENST00000466288 FRYLO94915 3013 aa16.58■□□□□ 0.24
CXCR4-203ENST00000466288 C9IYK1 514 aa16.58■□□□□ 0.24
CXCR4-203ENST00000466288 HIP1O00291 1037 aa16.58■□□□□ 0.24
CXCR4-203ENST00000466288 PLCB3Q01970 1234 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms