RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 MAKP20794 623 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 PTGS1P23219 599 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 KCNQ1P51787 676 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 PAK1Q13153 545 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 TUBA3CQ13748 450 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 GPR19Q15760 415 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 DDR2Q16832 855 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 TUBA3EQ6PEY2 450 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 Q6ZSN1 163 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 USP30Q70CQ3 517 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 OTOP2Q7RTS6 562 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 MTDHQ86UE4 582 aaKnown RBP3.66□□□□□ -1.82
CCDC93-205ENST00000466171 ST13P5Q8NFI4 369 aaPredicted RBP3.66□□□□□ -1.82
CCDC93-205ENST00000466171 IPO9Q96P70 1041 aaKnown RBP3.66□□□□□ -1.82
CCDC93-205ENST00000466171 ZDHHC5Q9C0B5 715 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 CATSPERZQ9NTU4 200 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 GALNT8Q9NY28 637 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 KIAA1522Q9P206 1035 aaPredicted RBP3.66□□□□□ -1.82
CCDC93-205ENST00000466171 ATP23Q9Y6H3 246 aa3.66□□□□□ -1.82
CCDC93-205ENST00000466171 FGRP09769 529 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 ST5P78524 1137 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 DGCR2P98153 550 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 NOLC1Q14978 699 aaKnown RBP eCLIP3.65□□□□□ -1.83
CCDC93-205ENST00000466171 NTRK3Q16288 839 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 ARHGAP36Q6ZRI8 547 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 ANKS3Q6ZW76 656 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 MAMDC2Q7Z304 686 aaPredicted RBP3.65□□□□□ -1.83
CCDC93-205ENST00000466171 ADGRE4PQ86SQ3 457 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 SGMS1Q86VZ5 419 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 RTKN2Q8IZC4 609 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 THEMISQ8N1K5 641 aaPredicted RBP3.65□□□□□ -1.83
CCDC93-205ENST00000466171 ZNF808Q8N4W9 903 aaPredicted RBP3.65□□□□□ -1.83
CCDC93-205ENST00000466171 HNRNPLLQ8WVV9 542 aaKnown RBP3.65□□□□□ -1.83
CCDC93-205ENST00000466171 OSBP2Q969R2 916 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 FBXW5Q969U6 566 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 IKZF4Q9H2S9 585 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 INCENPQ9NQS7 918 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 ARHGEF4Q9NR80 690 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 TLR9Q9NR96 1032 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 SRPK3Q9UPE1 567 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 GIT1Q9Y2X7 761 aa3.65□□□□□ -1.83
CCDC93-205ENST00000466171 PRAMEF25A6NGN4 478 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 C1SP09871 688 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 MSX2P35548 267 aaPredicted RBP3.64□□□□□ -1.83
CCDC93-205ENST00000466171 ADCY8P40145 1251 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 HERVK_113P62684 666 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 IL13RA1P78552 427 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 FOXL1Q12952 345 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 GRM7Q14831 915 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 CRY1Q16526 586 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 FAM47CQ5HY64 1035 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 FIGNQ5HY92 759 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 IGFL4Q6B9Z1 124 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 DNAJC10Q8IXB1 793 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 D2HGDHQ8N465 521 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 IL17DQ8TAD2 202 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 ZNF483Q8TF39 744 aaPredicted RBP3.64□□□□□ -1.83
CCDC93-205ENST00000466171 CACTINQ8WUQ7 758 aaKnown RBP3.64□□□□□ -1.83
CCDC93-205ENST00000466171 BTBD2Q9BX70 525 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 OR10A2Q9H208 303 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 PARPBPQ9NWS1 579 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 PLA2G3Q9NZ20 509 aa3.64□□□□□ -1.83
CCDC93-205ENST00000466171 REXO2Q9Y3B8 237 aaKnown RBP3.64□□□□□ -1.83
CCDC93-205ENST00000466171 A0A0G2JNJ9 132 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.63□□□□□ -1.83
CCDC93-205ENST00000466171 BLACEA4D250 179 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 FAM90A27PA6NNH2 459 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 U2SURPO15042 1029 aaKnown RBP3.63□□□□□ -1.83
CCDC93-205ENST00000466171 PLSCR1O15162 318 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 DUSP8Q13202 625 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 CRHR2Q13324 411 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 EIF4HQ15056 248 aaKnown RBP3.63□□□□□ -1.83
CCDC93-205ENST00000466171 PCOLCEQ15113 449 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 FILIP1Q7Z7B0 1213 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 MRGPRGQ86SM5 289 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 CELF2-AS1Q8N7Q2 184 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 SH3RF2Q8TEC5 729 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 PTPRN2Q92932 1015 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 ZNF669Q96BR6 464 aaPredicted RBP3.63□□□□□ -1.83
CCDC93-205ENST00000466171 WNK4Q96J92 1243 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 CDC6Q99741 560 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 PRRX2Q99811 253 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 KIAA1683Q9H0B3 1180 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 ZNF703Q9H7S9 590 aaPredicted RBP3.63□□□□□ -1.83
CCDC93-205ENST00000466171 Q9UFV3 132 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 FAM184BQ9ULE4 1060 aa3.63□□□□□ -1.83
CCDC93-205ENST00000466171 TCRBV5S4A2TA0A5A2 114 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 PMS2P1A4D2B8 440 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 CAPN14A8MX76 684 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 MATN2O00339 956 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 WNT9AO14904 365 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 CLASP2O75122 1294 aaKnown RBP3.62□□□□□ -1.83
CCDC93-205ENST00000466171 KRT15P19012 456 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 AOAHP28039 575 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 ECE1P42892 770 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 MRE11P49959 708 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 GUCY1A3Q02108 690 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 STILQ15468 1287 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 TBR1Q16650 682 aa3.62□□□□□ -1.83
CCDC93-205ENST00000466171 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms