RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 SART3Q15020 963 aaKnown RBP11.83□□□□□ -0.52
GPNMB-206ENST00000465673 PLCB4Q15147 1175 aa11.83□□□□□ -0.52
GPNMB-206ENST00000465673 TTC22Q5TAA0 569 aa11.83□□□□□ -0.52
GPNMB-206ENST00000465673 IER5Q5VY09 327 aa11.83□□□□□ -0.52
GPNMB-206ENST00000465673 CTCFLQ8NI51 663 aaPredicted RBP11.83□□□□□ -0.52
GPNMB-206ENST00000465673 PGBD1Q96JS3 809 aa11.83□□□□□ -0.52
GPNMB-206ENST00000465673 RPGRIP1Q96KN7 1286 aa11.83□□□□□ -0.52
GPNMB-206ENST00000465673 JADE2Q9NQC1 790 aa11.83□□□□□ -0.52
GPNMB-206ENST00000465673 SEC63Q9UGP8 760 aaKnown RBP11.83□□□□□ -0.52
GPNMB-206ENST00000465673 PCDHA6Q9UN73 950 aa11.83□□□□□ -0.52
GPNMB-206ENST00000465673 TRPC6Q9Y210 931 aa11.83□□□□□ -0.52
GPNMB-206ENST00000465673 GINS2Q9Y248 185 aa11.83□□□□□ -0.52
GPNMB-206ENST00000465673 PCDHA8Q9Y5H6 950 aa11.83□□□□□ -0.52
GPNMB-206ENST00000465673 ZDBF2Q9HCK1 2354 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 RRN3P2A6NIE6 340 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 ARP10275 920 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 SCG2P13521 617 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 ERVFC1P60507 584 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 ZXDAP98168 799 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 TCF15Q12870 199 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 NFX1Q12986 1120 aaKnown RBP11.82□□□□□ -0.52
GPNMB-206ENST00000465673 COASYQ13057 564 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 PAK2Q13177 524 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 FAM102BQ5T8I3 360 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 MICAL1Q8TDZ2 1067 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 CDHR1Q96JP9 859 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 PPP1R16BQ96T49 567 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 APOL5Q9BWW9 433 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 CELF4Q9BZC1 486 aaKnown RBP11.82□□□□□ -0.52
GPNMB-206ENST00000465673 TLE6Q9H808 572 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 JPH1Q9HDC5 661 aaPredicted RBP11.82□□□□□ -0.52
GPNMB-206ENST00000465673 FAM86C1Q9NVL1 165 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 PCDHA2Q9Y5H9 948 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 IGSF9BQ9UPX0 1349 aa11.82□□□□□ -0.52
GPNMB-206ENST00000465673 PLXNA4Q9HCM2 1894 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 SGSM2O43147 1006 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 PRC1O43663 620 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 DDAH1O94760 285 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 SP100P23497 879 aaPredicted RBP11.81□□□□□ -0.52
GPNMB-206ENST00000465673 KIF5BP33176 963 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 VCPP55072 806 aaKnown RBP11.81□□□□□ -0.52
GPNMB-206ENST00000465673 ACTR2P61160 394 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 KRT76Q01546 638 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 APOBRQ0VD83 1088 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 ITGB3BPQ13352 177 aaPredicted RBP11.81□□□□□ -0.52
GPNMB-206ENST00000465673 SPOUT1Q5T280 376 aaKnown RBP11.81□□□□□ -0.52
GPNMB-206ENST00000465673 NFXL1Q6ZNB6 911 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 BMP8AQ7Z5Y6 402 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 TMEM40Q8WWA1 233 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 FTHL17Q9BXU8 183 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 LRRC2Q9BYS8 371 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 KCNH7Q9NS40 1196 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 SLC9A2Q9UBY0 812 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 CDH22Q9UJ99 828 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 LRFN2Q9ULH4 789 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 NOC2LQ9Y3T9 749 aaKnown RBP11.81□□□□□ -0.52
GPNMB-206ENST00000465673 RBM8AQ9Y5S9 174 aaKnown RBP11.81□□□□□ -0.52
GPNMB-206ENST00000465673 LOXHD1Q8IVV2 1947 aa11.81□□□□□ -0.52
GPNMB-206ENST00000465673 SPDYE3A6NKU9 549 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 TBKBP1A7MCY6 615 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 M0QZ92 97 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 DDX39AO00148 427 aaKnown RBP11.8□□□□□ -0.52
GPNMB-206ENST00000465673 SH2B2O14492 632 aaPredicted RBP11.8□□□□□ -0.52
GPNMB-206ENST00000465673 STAG3L1P0CL83 205 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 SMARCA1P28370 1054 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 STAT5BP51692 787 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 AAMPQ13685 434 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 CBX2Q14781 532 aaPredicted RBP11.8□□□□□ -0.52
GPNMB-206ENST00000465673 NAALADL2Q58DX5 795 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 TYW1BQ6NUM6 668 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 MTHFD1LQ6UB35 978 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 HEATR3Q7Z4Q2 680 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 RUFY2Q8WXA3 655 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 MAP4K1Q92918 833 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 PPP2R3CQ969Q6 453 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 MAP3K14Q99558 947 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 ADAM2Q99965 735 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 MXRA8Q9BRK3 442 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 PHF7Q9BWX1 381 aaPredicted RBP11.8□□□□□ -0.52
GPNMB-206ENST00000465673 AZI2Q9H6S1 392 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 ERVK-5Q9HDB9 667 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 PCDHB7Q9Y5E2 793 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 SQORQ9Y6N5 450 aa11.8□□□□□ -0.52
GPNMB-206ENST00000465673 SMIM35A0A1B0GVV1 85 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 CCDC69A6NI79 296 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 FGF18O76093 207 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 CCNE2O96020 404 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 PDGFBP01127 241 aaPredicted RBP11.79□□□□□ -0.52
GPNMB-206ENST00000465673 FGFR1P11362 822 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 KLRC1P26715 233 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 SARSP49591 514 aaKnown RBP11.79□□□□□ -0.52
GPNMB-206ENST00000465673 GNAQP50148 359 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 CASC1Q6TDU7 716 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 SUGP1Q8IWZ8 645 aaKnown RBP11.79□□□□□ -0.52
GPNMB-206ENST00000465673 KIAA0319LQ8IZA0 1049 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 FBXL6Q8N531 539 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 ATP8B4Q8TF62 1192 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 ASIC4Q96FT7 647 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 LZTS2Q9BRK4 669 aa11.79□□□□□ -0.52
GPNMB-206ENST00000465673 TLR9Q9NR96 1032 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms