RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 FPGSQ05932 587 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 PTGDRQ13258 359 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 EPHA7Q15375 998 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 TRIM71Q2Q1W2 868 aaKnown RBP13.92□□□□□ -0.18
CHPF2-202ENST00000465601 RILPL1Q5EBL4 403 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 MARCH8Q5T0T0 291 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 RUFY4Q6ZNE9 571 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 TMEM199Q8N511 208 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 CCDC155Q8N6L0 562 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 CAGE1Q8TC20 777 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 BBXQ8WY36 941 aaPredicted RBP13.92□□□□□ -0.18
CHPF2-202ENST00000465601 PRO3102Q9H379 93 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.92□□□□□ -0.18
CHPF2-202ENST00000465601 NRBP2Q9NSY0 501 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 RGL1Q9NZL6 768 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 TUBE1Q9UJT0 475 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 MTMR6Q9Y217 621 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 LOXHD1Q8IVV2 1947 aa13.92□□□□□ -0.18
CHPF2-202ENST00000465601 MBLAC1A4D2B0 266 aaPredicted RBP13.91□□□□□ -0.18
CHPF2-202ENST00000465601 PITPNM1O00562 1244 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 OATP04181 439 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 P4HBP07237 508 aaKnown RBP13.91□□□□□ -0.18
CHPF2-202ENST00000465601 IQCF3P0C7M6 154 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 ACRP10323 421 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 CKBP12277 381 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 KLRC1P26715 233 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 BMP8BP34820 402 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 THPOP40225 353 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 TECP42680 631 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 QARSP47897 775 aaKnown RBP13.91□□□□□ -0.18
CHPF2-202ENST00000465601 EPHB4P54760 987 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 PSMC5P62195 406 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 PRKCEQ02156 737 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 ZNF484Q5JVG2 852 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 BRAPQ7Z569 592 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 DYDC2Q96IM9 177 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 FAM167AQ96KS9 214 aa13.91□□□□□ -0.18
CHPF2-202ENST00000465601 MYO9BQ13459 2157 aa13.9□□□□□ -0.18
CHPF2-202ENST00000465601 LAMA2P24043 3122 aaKnown RBP13.9□□□□□ -0.18
CHPF2-202ENST00000465601 POTEMA6NI47 508 aa13.9□□□□□ -0.18
CHPF2-202ENST00000465601 DDX11L8A8MPP1 907 aa13.9□□□□□ -0.18
CHPF2-202ENST00000465601 ZBTB42B2RXF5 422 aa13.9□□□□□ -0.18
CHPF2-202ENST00000465601 RBAK-RBAKDNI3L0D1 243 aa13.9□□□□□ -0.18
CHPF2-202ENST00000465601 STBD1O95210 358 aa13.9□□□□□ -0.18
CHPF2-202ENST00000465601 SELPP16109 830 aa13.9□□□□□ -0.18
CHPF2-202ENST00000465601 CYP4A11Q02928 519 aa13.9□□□□□ -0.18
CHPF2-202ENST00000465601 RESTQ13127 1097 aa13.9□□□□□ -0.18
CHPF2-202ENST00000465601 PPIGQ13427 754 aaKnown RBP eCLIP13.9□□□□□ -0.18
CHPF2-202ENST00000465601 CTTNQ14247 550 aaKnown RBP13.9□□□□□ -0.18
CHPF2-202ENST00000465601 ZNF618Q5T7W0 954 aa13.9□□□□□ -0.18
CHPF2-202ENST00000465601 FAM173BQ6P4H8 233 aa13.9□□□□□ -0.18
CHPF2-202ENST00000465601 MTHFD1LQ6UB35 978 aa13.9□□□□□ -0.18
CHPF2-202ENST00000465601 EIF2AK1Q9BQI3 630 aaKnown RBP13.9□□□□□ -0.18
CHPF2-202ENST00000465601 COL1A2P08123 1366 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 TMEM150BA6NC51 233 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 SLITRK3O94933 977 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 RBL2Q08999 1139 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 BECN1Q14457 450 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 XKR3Q5GH77 459 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 FOXD4L5Q5VV16 416 aaPredicted RBP13.89□□□□□ -0.19
CHPF2-202ENST00000465601 TAF2Q6P1X5 1199 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 TRAF7Q6Q0C0 670 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 LRRC8DQ7L1W4 858 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 C16orf59Q7L2K0 433 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 DEFB128Q7Z7B8 93 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 TPH2Q8IWU9 490 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 DNAJB3Q8WWF6 145 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 FOXD4L4Q8WXT5 416 aaPredicted RBP13.89□□□□□ -0.19
CHPF2-202ENST00000465601 HSD17B14Q9BPX1 270 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 SH2D3AQ9BRG2 576 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 LXNQ9BS40 222 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 FAM49AQ9H0Q0 323 aaPredicted RBP13.89□□□□□ -0.19
CHPF2-202ENST00000465601 IL23AQ9NPF7 189 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 WRAP73Q9P2S5 460 aaPredicted RBP13.89□□□□□ -0.19
CHPF2-202ENST00000465601 SEPT9Q9UHD8 586 aaPredicted RBP13.89□□□□□ -0.19
CHPF2-202ENST00000465601 PCDHA2Q9Y5H9 948 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 TANC1Q9C0D5 1861 aa13.89□□□□□ -0.19
CHPF2-202ENST00000465601 RSPH10B2B2RC85 870 aa13.88□□□□□ -0.19
CHPF2-202ENST00000465601 DKC1O60832 514 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHPF2-202ENST00000465601 CTSHP09668 335 aa13.88□□□□□ -0.19
CHPF2-202ENST00000465601 RSPH10BP0C881 870 aa13.88□□□□□ -0.19
CHPF2-202ENST00000465601 GPNMBQ14956 572 aa13.88□□□□□ -0.19
CHPF2-202ENST00000465601 SHHQ15465 462 aa13.88□□□□□ -0.19
CHPF2-202ENST00000465601 IL17AQ16552 155 aa13.88□□□□□ -0.19
CHPF2-202ENST00000465601 TMEM266Q2M3C6 531 aa13.88□□□□□ -0.19
CHPF2-202ENST00000465601 MTERF2Q49AM1 385 aa13.88□□□□□ -0.19
CHPF2-202ENST00000465601 C9orf50Q5SZB4 431 aa13.88□□□□□ -0.19
CHPF2-202ENST00000465601 ZNF365Q70YC5 407 aa13.88□□□□□ -0.19
CHPF2-202ENST00000465601 RPUSD2Q8IZ73 545 aaKnown RBP13.88□□□□□ -0.19
CHPF2-202ENST00000465601 VWCEQ96DN2 955 aa13.88□□□□□ -0.19
CHPF2-202ENST00000465601 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHPF2-202ENST00000465601 NIFKQ9BYG3 293 aaKnown RBP13.88□□□□□ -0.19
CHPF2-202ENST00000465601 ZSWIM4Q9H7M6 989 aa13.88□□□□□ -0.19
CHPF2-202ENST00000465601 CEP131Q9UPN4 1083 aa13.88□□□□□ -0.19
CHPF2-202ENST00000465601 LAMA3Q16787 3333 aa13.87□□□□□ -0.19
CHPF2-202ENST00000465601 A0A087WWV3 80 aa13.87□□□□□ -0.19
CHPF2-202ENST00000465601 LAD1O00515 517 aa13.87□□□□□ -0.19
CHPF2-202ENST00000465601 ZBTB39O15060 712 aa13.87□□□□□ -0.19
CHPF2-202ENST00000465601 C22orf31O95567 290 aa13.87□□□□□ -0.19
CHPF2-202ENST00000465601 FXR2P51116 673 aaKnown RBP eCLIP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms