RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 SLC26A4O43511 780 aa19.23■□□□□ 0.67
PTPRU-206ENST00000465525 RARBP10826 455 aa19.23■□□□□ 0.67
PTPRU-206ENST00000465525 PPTC7Q8NI37 304 aa19.23■□□□□ 0.67
PTPRU-206ENST00000465525 DDX20Q9UHI6 824 aaKnown RBP19.23■□□□□ 0.67
PTPRU-206ENST00000465525 DNM3Q9UQ16 869 aa19.23■□□□□ 0.67
PTPRU-206ENST00000465525 PLA2G4BP0C869 781 aa19.22■□□□□ 0.67
PTPRU-206ENST00000465525 ZNF286BP0CG31 522 aa19.22■□□□□ 0.67
PTPRU-206ENST00000465525 MARK3P27448 753 aa19.22■□□□□ 0.67
PTPRU-206ENST00000465525 BEX3Q00994 111 aa19.22■□□□□ 0.67
PTPRU-206ENST00000465525 ZSCAN23Q3MJ62 389 aa19.22■□□□□ 0.67
PTPRU-206ENST00000465525 PLA2G4FQ68DD2 849 aa19.22■□□□□ 0.67
PTPRU-206ENST00000465525 ATP6V0A1Q93050 837 aa19.22■□□□□ 0.67
PTPRU-206ENST00000465525 ZNF333Q96JL9 665 aa19.22■□□□□ 0.67
PTPRU-206ENST00000465525 MCOLN1Q9GZU1 580 aa19.22■□□□□ 0.67
PTPRU-206ENST00000465525 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.22■□□□□ 0.67
PTPRU-206ENST00000465525 AP5M1Q9H0R1 490 aa19.22■□□□□ 0.67
PTPRU-206ENST00000465525 UNC93B1Q9H1C4 597 aa19.22■□□□□ 0.67
PTPRU-206ENST00000465525 BHMT2Q9H2M3 363 aa19.22■□□□□ 0.67
PTPRU-206ENST00000465525 IGSF9BQ9UPX0 1349 aa19.22■□□□□ 0.67
PTPRU-206ENST00000465525 IGKV6D-21A0A0A0MT36 114 aa19.21■□□□□ 0.67
PTPRU-206ENST00000465525 MYCP01106 439 aaPredicted RBP19.21■□□□□ 0.67
PTPRU-206ENST00000465525 MMP3P08254 477 aa19.21■□□□□ 0.67
PTPRU-206ENST00000465525 MDM2Q00987 491 aaPredicted RBP19.21■□□□□ 0.67
PTPRU-206ENST00000465525 PRKCEQ02156 737 aa19.21■□□□□ 0.67
PTPRU-206ENST00000465525 POSTNQ15063 836 aa19.21■□□□□ 0.67
PTPRU-206ENST00000465525 SV2BQ7L1I2 683 aa19.21■□□□□ 0.67
PTPRU-206ENST00000465525 SH3RF1Q7Z6J0 888 aa19.21■□□□□ 0.67
PTPRU-206ENST00000465525 GLG1Q92896 1179 aa19.21■□□□□ 0.67
PTPRU-206ENST00000465525 NACC1Q96RE7 527 aa19.21■□□□□ 0.67
PTPRU-206ENST00000465525 KBTBD4Q9NVX7 518 aa19.21■□□□□ 0.67
PTPRU-206ENST00000465525 SYCE3A1L190 88 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 EYA4O95677 639 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 CCL5P13501 91 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 ATP4AP20648 1035 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 YWHABP31946 246 aaKnown RBP19.2■□□□□ 0.66
PTPRU-206ENST00000465525 STAT5BP51692 787 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 CUL4BQ13620 913 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 MTFR1Q15390 333 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 FAM160B1Q5W0V3 765 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 C4orf19Q8IY42 314 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 RNF208Q9H0X6 261 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 CUEDC2Q9H467 287 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 AZI2Q9H6S1 392 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 SPC25Q9HBM1 224 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 PAK6Q9NQU5 681 aaPredicted RBP19.2■□□□□ 0.66
PTPRU-206ENST00000465525 MAFBQ9Y5Q3 323 aaPredicted RBP19.2■□□□□ 0.66
PTPRU-206ENST00000465525 FRMPD3Q5JV73 1810 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 NPHP3-ACAD11A0A0J9YXS1 232 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 MYADML2A6NDP7 307 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 LGR5O75473 907 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 STBD1O95210 358 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 PGK1P00558 417 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 LGALS2P05162 132 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 NPEPPSP55786 919 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 GJA9P57773 515 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 RAD51AP2Q09MP3 1159 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 LHX8Q68G74 356 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 KANK3Q6NY19 840 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 GPBP1Q86WP2 473 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 XPNPEP3Q9NQH7 507 aa19.2■□□□□ 0.66
PTPRU-206ENST00000465525 SEPT9Q9UHD8 586 aaPredicted RBP19.2■□□□□ 0.66
PTPRU-206ENST00000465525 SYNRGQ9UMZ2 1314 aa19.19■□□□□ 0.66
PTPRU-206ENST00000465525 MYMKA6NI61 221 aa19.19■□□□□ 0.66
PTPRU-206ENST00000465525 LYPLA2O95372 231 aa19.19■□□□□ 0.66
PTPRU-206ENST00000465525 MYCNP04198 464 aaPredicted RBP19.19■□□□□ 0.66
PTPRU-206ENST00000465525 MUTP22033 750 aa19.19■□□□□ 0.66
PTPRU-206ENST00000465525 SLC12A3P55017 1021 aa19.19■□□□□ 0.66
PTPRU-206ENST00000465525 NKX3-2P78367 333 aa19.19■□□□□ 0.66
PTPRU-206ENST00000465525 BRDTQ58F21 947 aaPredicted RBP19.19■□□□□ 0.66
PTPRU-206ENST00000465525 ANO5Q75V66 913 aa19.19■□□□□ 0.66
PTPRU-206ENST00000465525 DYMQ7RTS9 669 aa19.19■□□□□ 0.66
PTPRU-206ENST00000465525 RUSC1Q9BVN2 902 aa19.19■□□□□ 0.66
PTPRU-206ENST00000465525 UPF3AQ9H1J1 476 aaKnown RBP19.19■□□□□ 0.66
PTPRU-206ENST00000465525 POLD4Q9HCU8 107 aa19.19■□□□□ 0.66
PTPRU-206ENST00000465525 BMP2KQ9NSY1 1161 aaPredicted RBP19.19■□□□□ 0.66
PTPRU-206ENST00000465525 EMSYQ7Z589 1322 aa19.18■□□□□ 0.66
PTPRU-206ENST00000465525 ARHGEF35A5YM69 484 aa19.18■□□□□ 0.66
PTPRU-206ENST00000465525 A6NJR5 290 aa19.18■□□□□ 0.66
PTPRU-206ENST00000465525 BIN1O00499 593 aa19.18■□□□□ 0.66
PTPRU-206ENST00000465525 CTAGE5O15320 804 aa19.18■□□□□ 0.66
PTPRU-206ENST00000465525 PPFIA4O75335 1185 aa19.18■□□□□ 0.66
PTPRU-206ENST00000465525 C6orf222P0C671 652 aaPredicted RBP19.18■□□□□ 0.66
PTPRU-206ENST00000465525 CPT1AP50416 773 aa19.18■□□□□ 0.66
PTPRU-206ENST00000465525 CACNB1Q02641 598 aaPredicted RBP19.18■□□□□ 0.66
PTPRU-206ENST00000465525 XKR9Q5GH70 373 aa19.18■□□□□ 0.66
PTPRU-206ENST00000465525 ISM2Q6H9L7 571 aa19.18■□□□□ 0.66
PTPRU-206ENST00000465525 SYT2Q8N9I0 419 aaPredicted RBP19.18■□□□□ 0.66
PTPRU-206ENST00000465525 AFAP1L1Q8TED9 768 aa19.18■□□□□ 0.66
PTPRU-206ENST00000465525 PPP1R13LQ8WUF5 828 aa19.18■□□□□ 0.66
PTPRU-206ENST00000465525 MAGEF1Q9HAY2 307 aa19.18■□□□□ 0.66
PTPRU-206ENST00000465525 HOOK1Q9UJC3 728 aaKnown RBP19.18■□□□□ 0.66
PTPRU-206ENST00000465525 GTPBP6O43824 516 aaPredicted RBP19.17■□□□□ 0.66
PTPRU-206ENST00000465525 OATP04181 439 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 MYL3P08590 195 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 CHMP4BP1P59074 171 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 DPYDQ12882 1025 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 FSCN1Q16658 493 aaKnown RBP19.17■□□□□ 0.66
PTPRU-206ENST00000465525 DGKDQ16760 1214 aa19.17■□□□□ 0.66
PTPRU-206ENST00000465525 CCDC43Q96MW1 224 aaKnown RBP19.17■□□□□ 0.66
PTPRU-206ENST00000465525 SMARCAD1Q9H4L7 1026 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms