RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 NME8Q8N427 588 aa23.74■■□□□ 1.39
CSPG5-204ENST00000465441 BANK1Q8NDB2 785 aa23.74■■□□□ 1.39
CSPG5-204ENST00000465441 LINC01599Q8WXQ3 324 aa23.74■■□□□ 1.39
CSPG5-204ENST00000465441 ZNF689Q96CS4 500 aaPredicted RBP23.74■■□□□ 1.39
CSPG5-204ENST00000465441 CELF4Q9BZC1 486 aaKnown RBP23.74■■□□□ 1.39
CSPG5-204ENST00000465441 IGLV3-22A0A075B6J6 115 aa23.73■■□□□ 1.39
CSPG5-204ENST00000465441 ESYT2A0FGR8 921 aa23.73■■□□□ 1.39
CSPG5-204ENST00000465441 HBP1O60381 514 aa23.73■■□□□ 1.39
CSPG5-204ENST00000465441 LINC00271P0C7V0 271 aa23.73■■□□□ 1.39
CSPG5-204ENST00000465441 KLRC1P26715 233 aa23.73■■□□□ 1.39
CSPG5-204ENST00000465441 BMPR1AP36894 532 aa23.73■■□□□ 1.39
CSPG5-204ENST00000465441 FBXL16Q8N461 479 aa23.73■■□□□ 1.39
CSPG5-204ENST00000465441 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.73■■□□□ 1.39
CSPG5-204ENST00000465441 AGXT2Q9BYV1 514 aa23.73■■□□□ 1.39
CSPG5-204ENST00000465441 RC3H2Q9HBD1 1191 aaKnown RBP23.73■■□□□ 1.39
CSPG5-204ENST00000465441 C6orf50Q9HD87 102 aa23.73■■□□□ 1.39
CSPG5-204ENST00000465441 PADI3Q9ULW8 664 aa23.73■■□□□ 1.39
CSPG5-204ENST00000465441 M0QZ92 97 aa23.72■■□□□ 1.39
CSPG5-204ENST00000465441 BACH1O14867 736 aa23.72■■□□□ 1.39
CSPG5-204ENST00000465441 DGKIO75912 1065 aa23.72■■□□□ 1.39
CSPG5-204ENST00000465441 RB1P06400 928 aa23.72■■□□□ 1.39
CSPG5-204ENST00000465441 KCNA5P22460 613 aa23.72■■□□□ 1.39
CSPG5-204ENST00000465441 RPS6KB1P23443 525 aa23.72■■□□□ 1.39
CSPG5-204ENST00000465441 LEXMQ3ZCV2 418 aa23.72■■□□□ 1.39
CSPG5-204ENST00000465441 SWSAP1Q6NVH7 229 aa23.72■■□□□ 1.39
CSPG5-204ENST00000465441 CCDC60Q8IWA6 550 aaPredicted RBP23.72■■□□□ 1.39
CSPG5-204ENST00000465441 PHKBQ93100 1093 aa23.72■■□□□ 1.39
CSPG5-204ENST00000465441 CCDC136Q96JN2 1154 aa23.72■■□□□ 1.39
CSPG5-204ENST00000465441 ZNF302Q9NR11 478 aa23.72■■□□□ 1.39
CSPG5-204ENST00000465441 TTC3P53804 2025 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 COL4A6Q14031 1691 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 ADGRA3Q8IWK6 1321 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 C5orf67F2Z3F1 127 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 IPO5O00410 1097 aaKnown RBP23.71■■□□□ 1.39
CSPG5-204ENST00000465441 ATP4AP20648 1035 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 CTNNB1P35222 781 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 BTG3Q14201 252 aaPredicted RBP23.71■■□□□ 1.39
CSPG5-204ENST00000465441 NTRK3Q16288 839 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 TIGD5Q53EQ6 642 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 TCEAL5Q5H9L2 206 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 FAM160B1Q5W0V3 765 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 MCTP2Q6DN12 878 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 PDXDC2PQ6P474 469 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 ATP8B4Q8TF62 1192 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 CCDC12Q8WUD4 166 aaPredicted RBP23.71■■□□□ 1.39
CSPG5-204ENST00000465441 ZNF577Q9BSK1 485 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 FTHL17Q9BXU8 183 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 EPHX3Q9H6B9 360 aa23.71■■□□□ 1.39
CSPG5-204ENST00000465441 NCOR1O75376 2440 aa23.7■■□□□ 1.38
CSPG5-204ENST00000465441 IGSF9BQ9UPX0 1349 aa23.7■■□□□ 1.38
CSPG5-204ENST00000465441 KDM3AQ9Y4C1 1321 aa23.7■■□□□ 1.38
CSPG5-204ENST00000465441 PPFIA3O75145 1194 aa23.7■■□□□ 1.38
CSPG5-204ENST00000465441 GNA11P29992 359 aa23.7■■□□□ 1.38
CSPG5-204ENST00000465441 KRT76Q01546 638 aa23.7■■□□□ 1.38
CSPG5-204ENST00000465441 AKAP17AQ02040 695 aaKnown RBP23.7■■□□□ 1.38
CSPG5-204ENST00000465441 MIS18BP1Q6P0N0 1132 aa23.7■■□□□ 1.38
CSPG5-204ENST00000465441 CRIPAKQ8N1N5 446 aa23.7■■□□□ 1.38
CSPG5-204ENST00000465441 CLP1Q92989 425 aaKnown RBP23.7■■□□□ 1.38
CSPG5-204ENST00000465441 NID2Q14112 1375 aa23.69■■□□□ 1.38
CSPG5-204ENST00000465441 PSMA5P28066 241 aa23.69■■□□□ 1.38
CSPG5-204ENST00000465441 ZNF484Q5JVG2 852 aa23.69■■□□□ 1.38
CSPG5-204ENST00000465441 KIAA0319LQ8IZA0 1049 aa23.69■■□□□ 1.38
CSPG5-204ENST00000465441 REXO1Q8N1G1 1221 aaKnown RBP23.69■■□□□ 1.38
CSPG5-204ENST00000465441 NEK9Q8TD19 979 aa23.69■■□□□ 1.38
CSPG5-204ENST00000465441 RASGRP4Q8TDF6 673 aa23.69■■□□□ 1.38
CSPG5-204ENST00000465441 NSUN3Q9H649 340 aaKnown RBP23.69■■□□□ 1.38
CSPG5-204ENST00000465441 CDHR5Q9HBB8 845 aa23.69■■□□□ 1.38
CSPG5-204ENST00000465441 CD320Q9NPF0 282 aa23.69■■□□□ 1.38
CSPG5-204ENST00000465441 TBC1D22BQ9NU19 505 aa23.69■■□□□ 1.38
CSPG5-204ENST00000465441 RAPGEFL1Q9UHV5 662 aa23.69■■□□□ 1.38
CSPG5-204ENST00000465441 RWDD3Q9Y3V2 267 aa23.69■■□□□ 1.38
CSPG5-204ENST00000465441 NLRC5Q86WI3 1866 aa23.68■■□□□ 1.38
CSPG5-204ENST00000465441 GRM6O15303 877 aa23.68■■□□□ 1.38
CSPG5-204ENST00000465441 PDIA3P30101 505 aaKnown RBP23.68■■□□□ 1.38
CSPG5-204ENST00000465441 CCT2P78371 535 aaKnown RBP23.68■■□□□ 1.38
CSPG5-204ENST00000465441 PAK2Q13177 524 aa23.68■■□□□ 1.38
CSPG5-204ENST00000465441 TMEM266Q2M3C6 531 aa23.68■■□□□ 1.38
CSPG5-204ENST00000465441 C1QTNF1Q9BXJ1 281 aa23.68■■□□□ 1.38
CSPG5-204ENST00000465441 SLC26A6Q9BXS9 759 aa23.68■■□□□ 1.38
CSPG5-204ENST00000465441 RNF26Q9BY78 433 aaPredicted RBP23.68■■□□□ 1.38
CSPG5-204ENST00000465441 TMX1Q9H3N1 280 aa23.68■■□□□ 1.38
CSPG5-204ENST00000465441 BRWD1Q9NSI6 2320 aa23.67■■□□□ 1.38
CSPG5-204ENST00000465441 ZBTB42B2RXF5 422 aa23.67■■□□□ 1.38
CSPG5-204ENST00000465441 EDIL3O43854 480 aa23.67■■□□□ 1.38
CSPG5-204ENST00000465441 IL9P15248 144 aa23.67■■□□□ 1.38
CSPG5-204ENST00000465441 IFNAR1P17181 557 aa23.67■■□□□ 1.38
CSPG5-204ENST00000465441 CIITAP33076 1130 aa23.67■■□□□ 1.38
CSPG5-204ENST00000465441 EVCP57679 992 aa23.67■■□□□ 1.38
CSPG5-204ENST00000465441 NFX1Q12986 1120 aaKnown RBP23.67■■□□□ 1.38
CSPG5-204ENST00000465441 PRR16Q569H4 304 aa23.67■■□□□ 1.38
CSPG5-204ENST00000465441 ZNF746Q6NUN9 644 aaPredicted RBP23.67■■□□□ 1.38
CSPG5-204ENST00000465441 NPAS4Q8IUM7 802 aa23.67■■□□□ 1.38
CSPG5-204ENST00000465441 KHSRPQ92945 711 aaKnown RBP eCLIP23.67■■□□□ 1.38
CSPG5-204ENST00000465441 PABPC5Q96DU9 382 aaKnown RBP23.67■■□□□ 1.38
CSPG5-204ENST00000465441 C11orf84Q9BUA3 381 aaPredicted RBP23.67■■□□□ 1.38
CSPG5-204ENST00000465441 LMAN2LQ9H0V9 348 aa23.67■■□□□ 1.38
CSPG5-204ENST00000465441 GINS2Q9Y248 185 aa23.67■■□□□ 1.38
CSPG5-204ENST00000465441 MAFBQ9Y5Q3 323 aaPredicted RBP23.67■■□□□ 1.38
CSPG5-204ENST00000465441 LOXHD1Q8IVV2 1947 aa23.67■■□□□ 1.38
CSPG5-204ENST00000465441 COL1A2P08123 1366 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms