RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 NEK1Q96PY6 1258 aa16.21■□□□□ 0.19
ATG4B-214ENST00000465399 ANO3Q9BYT9 981 aa16.21■□□□□ 0.19
ATG4B-214ENST00000465399 PCDHA2Q9Y5H9 948 aa16.21■□□□□ 0.19
ATG4B-214ENST00000465399 IGSF9BQ9UPX0 1349 aa16.2■□□□□ 0.18
ATG4B-214ENST00000465399 POTEB3A0JP26 581 aa16.2■□□□□ 0.18
ATG4B-214ENST00000465399 STAG3L1P0CL83 205 aa16.2■□□□□ 0.18
ATG4B-214ENST00000465399 ZNF76P36508 570 aa16.2■□□□□ 0.18
ATG4B-214ENST00000465399 HYAL1Q12794 435 aa16.2■□□□□ 0.18
ATG4B-214ENST00000465399 CSPP1Q1MSJ5 1256 aa16.2■□□□□ 0.18
ATG4B-214ENST00000465399 POTEBQ6S5H4 581 aa16.2■□□□□ 0.18
ATG4B-214ENST00000465399 TRAPPC12Q8WVT3 735 aa16.2■□□□□ 0.18
ATG4B-214ENST00000465399 LINC01599Q8WXQ3 324 aa16.2■□□□□ 0.18
ATG4B-214ENST00000465399 P2RX5Q93086 422 aa16.2■□□□□ 0.18
ATG4B-214ENST00000465399 PPP2R3CQ969Q6 453 aa16.2■□□□□ 0.18
ATG4B-214ENST00000465399 CELF4Q9BZC1 486 aaKnown RBP16.2■□□□□ 0.18
ATG4B-214ENST00000465399 GLT8D2Q9H1C3 349 aa16.2■□□□□ 0.18
ATG4B-214ENST00000465399 AGO4Q9HCK5 861 aaKnown RBP16.2■□□□□ 0.18
ATG4B-214ENST00000465399 PADI3Q9ULW8 664 aa16.2■□□□□ 0.18
ATG4B-214ENST00000465399 SMIM35A0A1B0GVV1 85 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 SMCO2A6NFE2 343 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 STXBP3O00186 592 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 CSPG5O95196 566 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 ARP10275 920 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 LTBRP36941 435 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 KRT76Q01546 638 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 ZP2Q05996 745 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 ITGB3BPQ13352 177 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-214ENST00000465399 AP3B2Q13367 1082 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 CTC1Q2NKJ3 1217 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 NAALADL2Q58DX5 795 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 FAM160B1Q5W0V3 765 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 TYW1BQ6NUM6 668 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 ADHFE1Q8IWW8 467 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 NME8Q8N427 588 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 ALG13Q9NP73 1137 aaKnown RBP16.19■□□□□ 0.18
ATG4B-214ENST00000465399 MRPL42Q9Y6G3 142 aaKnown RBP16.19■□□□□ 0.18
ATG4B-214ENST00000465399 V9GY48 417 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-214ENST00000465399 KDM3AQ9Y4C1 1321 aa16.19■□□□□ 0.18
ATG4B-214ENST00000465399 MEIS1O00470 390 aa16.18■□□□□ 0.18
ATG4B-214ENST00000465399 BACH1O14867 736 aa16.18■□□□□ 0.18
ATG4B-214ENST00000465399 DCXO43602 365 aa16.18■□□□□ 0.18
ATG4B-214ENST00000465399 SCG2P13521 617 aa16.18■□□□□ 0.18
ATG4B-214ENST00000465399 SREBF1P36956 1147 aa16.18■□□□□ 0.18
ATG4B-214ENST00000465399 CLUL1Q15846 466 aa16.18■□□□□ 0.18
ATG4B-214ENST00000465399 MTHFD1LQ6UB35 978 aa16.18■□□□□ 0.18
ATG4B-214ENST00000465399 DHX32Q7L7V1 743 aaKnown RBP16.18■□□□□ 0.18
ATG4B-214ENST00000465399 TCEANC2Q96MN5 208 aa16.18■□□□□ 0.18
ATG4B-214ENST00000465399 UIMC1Q96RL1 719 aa16.18■□□□□ 0.18
ATG4B-214ENST00000465399 POP1Q99575 1024 aaKnown RBP16.18■□□□□ 0.18
ATG4B-214ENST00000465399 IGFLR1Q9H665 355 aa16.18■□□□□ 0.18
ATG4B-214ENST00000465399 BARHL2Q9NY43 387 aa16.18■□□□□ 0.18
ATG4B-214ENST00000465399 LRFN2Q9ULH4 789 aa16.18■□□□□ 0.18
ATG4B-214ENST00000465399 PLAGL2Q9UPG8 496 aa16.18■□□□□ 0.18
ATG4B-214ENST00000465399 COL1A2P08123 1366 aa16.17■□□□□ 0.18
ATG4B-214ENST00000465399 GOLGA8AA7E2F4 631 aa16.17■□□□□ 0.18
ATG4B-214ENST00000465399 GOLGA8BA8MQT2 603 aa16.17■□□□□ 0.18
ATG4B-214ENST00000465399 DDX39AO00148 427 aaKnown RBP16.17■□□□□ 0.18
ATG4B-214ENST00000465399 ATG7O95352 703 aa16.17■□□□□ 0.18
ATG4B-214ENST00000465399 HOXD11P31277 338 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-214ENST00000465399 DLX2Q07687 328 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-214ENST00000465399 FUT2Q10981 343 aa16.17■□□□□ 0.18
ATG4B-214ENST00000465399 SMAD2Q15796 467 aaKnown RBP16.17■□□□□ 0.18
ATG4B-214ENST00000465399 PAN2Q504Q3 1202 aaKnown RBP16.17■□□□□ 0.18
ATG4B-214ENST00000465399 BMP2KLQ5H9B9 411 aa16.17■□□□□ 0.18
ATG4B-214ENST00000465399 FAM43BQ6ZT52 329 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-214ENST00000465399 NIPA1Q7RTP0 329 aa16.17■□□□□ 0.18
ATG4B-214ENST00000465399 RTN4RL1Q86UN2 441 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-214ENST00000465399 CRIPAKQ8N1N5 446 aa16.17■□□□□ 0.18
ATG4B-214ENST00000465399 UPF3BQ9BZI7 483 aaKnown RBP16.17■□□□□ 0.18
ATG4B-214ENST00000465399 RNF216Q9NWF9 866 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-214ENST00000465399 TMEM260Q9NX78 707 aa16.17■□□□□ 0.18
ATG4B-214ENST00000465399 BRPF3Q9ULD4 1205 aa16.17■□□□□ 0.18
ATG4B-214ENST00000465399 GINS2Q9Y248 185 aa16.17■□□□□ 0.18
ATG4B-214ENST00000465399 C5orf42Q9H799 3197 aa16.17■□□□□ 0.18
ATG4B-214ENST00000465399 IGKV6D-21A0A0A0MT36 114 aa16.16■□□□□ 0.18
ATG4B-214ENST00000465399 KLF18A0A0U1RQI7 1052 aa16.16■□□□□ 0.18
ATG4B-214ENST00000465399 C19orf67A6NJJ6 358 aa16.16■□□□□ 0.18
ATG4B-214ENST00000465399 HBP1O60381 514 aa16.16■□□□□ 0.18
ATG4B-214ENST00000465399 TBX10O75333 385 aa16.16■□□□□ 0.18
ATG4B-214ENST00000465399 ITGB1P05556 798 aa16.16■□□□□ 0.18
ATG4B-214ENST00000465399 KLRC1P26715 233 aa16.16■□□□□ 0.18
ATG4B-214ENST00000465399 CLK2P49760 499 aaKnown RBP16.16■□□□□ 0.18
ATG4B-214ENST00000465399 NDUFV1P49821 464 aa16.16■□□□□ 0.18
ATG4B-214ENST00000465399 FGD1P98174 961 aa16.16■□□□□ 0.18
ATG4B-214ENST00000465399 EXOSC10Q01780 885 aaKnown RBP16.16■□□□□ 0.18
ATG4B-214ENST00000465399 NFX1Q12986 1120 aaKnown RBP16.16■□□□□ 0.18
ATG4B-214ENST00000465399 SMAD4Q13485 552 aaKnown RBP16.16■□□□□ 0.18
ATG4B-214ENST00000465399 KRT32Q14532 448 aa16.16■□□□□ 0.18
ATG4B-214ENST00000465399 ODR4Q5SWX8 454 aa16.16■□□□□ 0.18
ATG4B-214ENST00000465399 ATP8B4Q8TF62 1192 aa16.16■□□□□ 0.18
ATG4B-214ENST00000465399 ZNF302Q9NR11 478 aa16.16■□□□□ 0.18
ATG4B-214ENST00000465399 NAP1L2Q9ULW6 460 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-214ENST00000465399 MUC6Q6W4X9 2439 aa16.15■□□□□ 0.18
ATG4B-214ENST00000465399 DENND3A2RUS2 1198 aa16.15■□□□□ 0.18
ATG4B-214ENST00000465399 LINC01565O15544 149 aa16.15■□□□□ 0.18
ATG4B-214ENST00000465399 MBTPS2O43462 519 aa16.15■□□□□ 0.18
ATG4B-214ENST00000465399 RPS6KA5O75582 802 aa16.15■□□□□ 0.18
ATG4B-214ENST00000465399 CCNE2O96020 404 aa16.15■□□□□ 0.18
ATG4B-214ENST00000465399 IBSPP21815 317 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-214ENST00000465399 GTF2F1P35269 517 aaKnown RBP eCLIP16.15■□□□□ 0.182e-8■■■■■ 34.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms