RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 FAM9BQ8IZU0 186 aa11.07□□□□□ -0.64
APP-213ENST00000464867 POF1BQ8WVV4 589 aa11.07□□□□□ -0.64
APP-213ENST00000464867 COL26A1Q96A83 441 aa11.07□□□□□ -0.64
APP-213ENST00000464867 RTP3Q9BQQ7 232 aa11.07□□□□□ -0.64
APP-213ENST00000464867 USP24Q9UPU5 2620 aa11.07□□□□□ -0.64
APP-213ENST00000464867 NFIBO00712 420 aa11.06□□□□□ -0.64
APP-213ENST00000464867 F2P00734 622 aa11.06□□□□□ -0.64
APP-213ENST00000464867 ZNF286BP0CG31 522 aa11.06□□□□□ -0.64
APP-213ENST00000464867 SNRPBP14678 240 aaKnown RBP11.06□□□□□ -0.64
APP-213ENST00000464867 EDNRBP24530 442 aa11.06□□□□□ -0.64
APP-213ENST00000464867 SLFN5Q08AF3 891 aa11.06□□□□□ -0.64
APP-213ENST00000464867 LY6KQ17RY6 165 aa11.06□□□□□ -0.64
APP-213ENST00000464867 LCE2AQ5TA79 106 aaPredicted RBP11.06□□□□□ -0.64
APP-213ENST00000464867 ZSCAN25Q6NSZ9 544 aa11.06□□□□□ -0.64
APP-213ENST00000464867 CCDC62Q6P9F0 684 aa11.06□□□□□ -0.64
APP-213ENST00000464867 SLC30A10Q6XR72 485 aa11.06□□□□□ -0.64
APP-213ENST00000464867 DTWD2Q8NBA8 298 aa11.06□□□□□ -0.64
APP-213ENST00000464867 SPPL3Q8TCT6 385 aa11.06□□□□□ -0.64
APP-213ENST00000464867 ATP6V0A1Q93050 837 aa11.06□□□□□ -0.64
APP-213ENST00000464867 CDCA3Q99618 268 aaPredicted RBP11.06□□□□□ -0.64
APP-213ENST00000464867 C17orf102A2RUQ5 167 aa11.05□□□□□ -0.64
APP-213ENST00000464867 HAS3O00219 553 aa11.05□□□□□ -0.64
APP-213ENST00000464867 PER2O15055 1255 aa11.05□□□□□ -0.64
APP-213ENST00000464867 PRDM1O75626 825 aa11.05□□□□□ -0.64
APP-213ENST00000464867 ITGB1P05556 798 aa11.05□□□□□ -0.64
APP-213ENST00000464867 CTSHP09668 335 aa11.05□□□□□ -0.64
APP-213ENST00000464867 LINC00271P0C7V0 271 aa11.05□□□□□ -0.64
APP-213ENST00000464867 AOC1P19801 751 aa11.05□□□□□ -0.64
APP-213ENST00000464867 DNAJB1P25685 340 aa11.05□□□□□ -0.64
APP-213ENST00000464867 RPS6P62753 249 aaKnown RBP11.05□□□□□ -0.64
APP-213ENST00000464867 LAMC2Q13753 1193 aa11.05□□□□□ -0.64
APP-213ENST00000464867 UBE3CQ15386 1083 aa11.05□□□□□ -0.64
APP-213ENST00000464867 OTOGLQ3ZCN5 2332 aa11.05□□□□□ -0.64
APP-213ENST00000464867 KLHL23Q8NBE8 558 aa11.05□□□□□ -0.64
APP-213ENST00000464867 TSC1Q92574 1164 aa11.05□□□□□ -0.64
APP-213ENST00000464867 PAG1Q9NWQ8 432 aa11.05□□□□□ -0.64
APP-213ENST00000464867 KIAA1217Q5T5P2 1943 aa11.05□□□□□ -0.64
APP-213ENST00000464867 MYH7P12883 1935 aa11.04□□□□□ -0.64
APP-213ENST00000464867 PPFIA4O75335 1185 aa11.04□□□□□ -0.64
APP-213ENST00000464867 SLC3A2P08195 630 aaKnown RBP11.04□□□□□ -0.64
APP-213ENST00000464867 GNAT1P11488 350 aa11.04□□□□□ -0.64
APP-213ENST00000464867 VARSP26640 1264 aaKnown RBP11.04□□□□□ -0.64
APP-213ENST00000464867 TECP42680 631 aa11.04□□□□□ -0.64
APP-213ENST00000464867 CLK2P49760 499 aaKnown RBP11.04□□□□□ -0.64
APP-213ENST00000464867 CCDC96Q2M329 555 aa11.04□□□□□ -0.64
APP-213ENST00000464867 SLFNL1Q499Z3 407 aa11.04□□□□□ -0.64
APP-213ENST00000464867 CES5AQ6NT32 575 aa11.04□□□□□ -0.64
APP-213ENST00000464867 GIMAP6Q6P9H5 292 aa11.04□□□□□ -0.64
APP-213ENST00000464867 GPR161Q8N6U8 529 aaKnown RBP11.04□□□□□ -0.64
APP-213ENST00000464867 NEDD1Q8NHV4 660 aa11.04□□□□□ -0.64
APP-213ENST00000464867 PPTC7Q8NI37 304 aa11.04□□□□□ -0.64
APP-213ENST00000464867 ATP8B4Q8TF62 1192 aa11.04□□□□□ -0.64
APP-213ENST00000464867 FOXJ1Q92949 421 aa11.04□□□□□ -0.64
APP-213ENST00000464867 NECTIN4Q96NY8 510 aa11.04□□□□□ -0.64
APP-213ENST00000464867 RANBP17Q9H2T7 1088 aaKnown RBP11.04□□□□□ -0.64
APP-213ENST00000464867 STX8Q9UNK0 236 aa11.04□□□□□ -0.64
APP-213ENST00000464867 WASF2Q9Y6W5 498 aa11.04□□□□□ -0.64
APP-213ENST00000464867 R4GN57 208 aa11.04□□□□□ -0.64
APP-213ENST00000464867 FASNP49327 2511 aaKnown RBP11.03□□□□□ -0.64
APP-213ENST00000464867 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
APP-213ENST00000464867 DGKIO75912 1065 aa11.03□□□□□ -0.64
APP-213ENST00000464867 IFIT2P09913 472 aaKnown RBP11.03□□□□□ -0.64
APP-213ENST00000464867 HOXB8P17481 243 aaPredicted RBP11.03□□□□□ -0.64
APP-213ENST00000464867 RFX1P22670 979 aa11.03□□□□□ -0.64
APP-213ENST00000464867 TDO2P48775 406 aa11.03□□□□□ -0.64
APP-213ENST00000464867 RARSP54136 660 aaKnown RBP11.03□□□□□ -0.64
APP-213ENST00000464867 UBE3AQ05086 875 aa11.03□□□□□ -0.64
APP-213ENST00000464867 STXBP2Q15833 593 aa11.03□□□□□ -0.64
APP-213ENST00000464867 PDE12Q6L8Q7 609 aaKnown RBP11.03□□□□□ -0.64
APP-213ENST00000464867 CMTR2Q8IYT2 770 aaKnown RBP11.03□□□□□ -0.64
APP-213ENST00000464867 CLASRPQ8N2M8 674 aaKnown RBP11.03□□□□□ -0.64
APP-213ENST00000464867 ZNF689Q96CS4 500 aaPredicted RBP11.03□□□□□ -0.64
APP-213ENST00000464867 APOL5Q9BWW9 433 aa11.03□□□□□ -0.64
APP-213ENST00000464867 S1PR5Q9H228 398 aa11.03□□□□□ -0.64
APP-213ENST00000464867 MTMR7Q9Y216 660 aa11.03□□□□□ -0.64
APP-213ENST00000464867 MRPL42Q9Y6G3 142 aaKnown RBP11.03□□□□□ -0.64
APP-213ENST00000464867 TTC3P53804 2025 aa11.02□□□□□ -0.64
APP-213ENST00000464867 RBAK-RBAKDNI3L0D1 243 aa11.02□□□□□ -0.65
APP-213ENST00000464867 PI15O43692 258 aa11.02□□□□□ -0.65
APP-213ENST00000464867 ATXN1P54253 815 aaKnown RBP11.02□□□□□ -0.65
APP-213ENST00000464867 TFAP4Q01664 338 aa11.02□□□□□ -0.65
APP-213ENST00000464867 DMWDQ09019 674 aa11.02□□□□□ -0.65
APP-213ENST00000464867 DUSP6Q16828 381 aa11.02□□□□□ -0.65
APP-213ENST00000464867 HSP90AB4PQ58FF6 505 aa11.02□□□□□ -0.65
APP-213ENST00000464867 ANKRD54Q6NXT1 300 aa11.02□□□□□ -0.65
APP-213ENST00000464867 TREML4Q6UXN2 200 aa11.02□□□□□ -0.65
APP-213ENST00000464867 DCLK2Q8N568 766 aa11.02□□□□□ -0.65
APP-213ENST00000464867 NSUN6Q8TEA1 469 aaKnown RBP11.02□□□□□ -0.65
APP-213ENST00000464867 RC3H2Q9HBD1 1191 aaKnown RBP11.02□□□□□ -0.65
APP-213ENST00000464867 IL1RAPL2Q9NP60 686 aa11.02□□□□□ -0.65
APP-213ENST00000464867 SH2B1Q9NRF2 756 aaPredicted RBP11.02□□□□□ -0.65
APP-213ENST00000464867 DDX41Q9UJV9 622 aaKnown RBP11.02□□□□□ -0.65
APP-213ENST00000464867 FBXL21Q9UKT6 434 aa11.02□□□□□ -0.65
APP-213ENST00000464867 CDV3Q9UKY7 258 aaKnown RBP11.02□□□□□ -0.65
APP-213ENST00000464867 PCDHB12Q9Y5F1 795 aa11.02□□□□□ -0.65
APP-213ENST00000464867 MRVI1Q9Y6F6 885 aa11.02□□□□□ -0.65
APP-213ENST00000464867 KAT6AQ92794 2004 aa11.01□□□□□ -0.65
APP-213ENST00000464867 KIAA1671Q9BY89 1806 aa11.01□□□□□ -0.65
APP-213ENST00000464867 PRR5-ARHGAP8B1AHC4 643 aa11.01□□□□□ -0.65
APP-213ENST00000464867 C2CD4DB7Z1M9 353 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms