RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 HDAC9Q9UKV0 1011 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 C5orf60A6NFR6 353 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 MYCNP04198 464 aaPredicted RBP13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 LDHBP07195 334 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 IFI35P80217 286 aaPredicted RBP13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 ZNF211Q13398 564 aaPredicted RBP13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 DRP2Q13474 957 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 AADACL2Q6P093 401 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 GPBP1Q86WP2 473 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 LRRC47Q8N1G4 583 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 U2AF1L4Q8WU68 220 aaKnown RBP13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 PSMD1Q99460 953 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 SELENOSQ9BQE4 189 aa13.73□□□□□ -0.21
CLCNKA-204ENST00000464764 CHRM1P11229 460 aaPredicted RBP13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 CHN1P15882 459 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 NBPF9Q3BBW0 867 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 TCERG1LQ5VWI1 586 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 BANK1Q8NDB2 785 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 TCP11Q8WWU5 503 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 MIEF2Q96C03 454 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 XPO6Q96QU8 1125 aaKnown RBP13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 LZTS2Q9BRK4 669 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 BHMG1C9JSJ3 638 aaPredicted RBP13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 C21orf2O43822 256 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 PLA2G4BP0C869 781 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 PAX7P23759 505 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 PON1P27169 355 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 ELF3P78545 371 aaPredicted RBP13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 PDIA5Q14554 519 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 FAM133BQ5BKY9 247 aaKnown RBP13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 AGBL2Q5U5Z8 902 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 ATP8B4Q8TF62 1192 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 ERVK-5Q9HDB9 667 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 DDX25Q9UHL0 483 aaKnown RBP13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 PPP1R9AQ9ULJ8 1098 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 STRCP1A6NGW2 1772 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 DDX3XO00571 662 aaKnown RBP eCLIP13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 CLSTN1O94985 981 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 ABCB4P21439 1286 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 SLCO1A2P46721 670 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 ADCY7P51828 1080 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 CHMP6Q96FZ7 201 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 EPB41L4BQ9H329 900 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 PCDHA12Q9UN75 941 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 L3MBTL1Q9Y468 752 aa13.72□□□□□ -0.21
CLCNKA-204ENST00000464764 SPDYE3A6NKU9 549 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 SRRM3A6NNA2 597 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 MEIS1O00470 390 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 SKAP2O75563 359 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 TRIM37O94972 964 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 CLTAP09496 248 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 IFNAR2P48551 515 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 CASP4P49662 377 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 XRCC4Q13426 336 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 MKRN4PQ13434 485 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 ARSHQ5FYA8 562 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 ERMARDQ5T6L9 678 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 TBC1D9BQ66K14 1250 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 NT5DC3Q86UY8 548 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 PNMA8AQ86V59 439 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 CEP63Q96MT8 703 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 RAB34Q9BZG1 259 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 SNX24Q9Y343 169 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 UTP11Q9Y3A2 253 aaKnown RBP13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 MYH7BA7E2Y1 1941 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 MYH4Q9Y623 1939 aa13.71□□□□□ -0.21
CLCNKA-204ENST00000464764 DCCP43146 1447 aa13.71□□□□□ -0.22
CLCNKA-204ENST00000464764 PPIP5K2O43314 1243 aa13.71□□□□□ -0.22
CLCNKA-204ENST00000464764 GFPT2O94808 682 aa13.71□□□□□ -0.22
CLCNKA-204ENST00000464764 KRT18P05783 430 aaKnown RBP13.71□□□□□ -0.22
CLCNKA-204ENST00000464764 PLTPP55058 493 aa13.71□□□□□ -0.22
CLCNKA-204ENST00000464764 PSMC6P62333 389 aa13.71□□□□□ -0.22
CLCNKA-204ENST00000464764 EXOC3L4Q17RC7 722 aa13.71□□□□□ -0.22
CLCNKA-204ENST00000464764 DCAF12L1Q5VU92 463 aa13.71□□□□□ -0.22
CLCNKA-204ENST00000464764 TBC1D1Q86TI0 1168 aaPredicted RBP13.71□□□□□ -0.22
CLCNKA-204ENST00000464764 LRRC34Q8IZ02 419 aa13.71□□□□□ -0.22
CLCNKA-204ENST00000464764 ELAC2Q9BQ52 826 aaKnown RBP13.71□□□□□ -0.22
CLCNKA-204ENST00000464764 BMP2KQ9NSY1 1161 aaPredicted RBP13.71□□□□□ -0.22
CLCNKA-204ENST00000464764 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.71□□□□□ -0.22
CLCNKA-204ENST00000464764 STXBP5LQ9Y2K9 1186 aa13.71□□□□□ -0.22
CLCNKA-204ENST00000464764 CCT8L1PA6NM43 557 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 CETN3O15182 167 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 BUB1BO60566 1050 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 PPP1R11O60927 126 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 MMEP08473 750 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 PAEPP09466 180 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 CYP11B2P19099 503 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 CDC25CP30307 473 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 SLC16A2P36021 539 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 POU5F1Q01860 360 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 KCNA1Q09470 495 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 CCDC38Q502W7 563 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 LACTB2Q53H82 288 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 MSL1Q68DK7 614 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 TTBK2Q6IQ55 1244 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 RNF25Q96BH1 459 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 STAMBPL1Q96FJ0 436 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 FMO2Q99518 471 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 NOD2Q9HC29 1040 aa13.7□□□□□ -0.22
CLCNKA-204ENST00000464764 KIAA1551Q9HCM1 1747 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms