RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 DIS3Q9Y2L1 958 aaKnown RBP7.96□□□□□ -1.13
USP48-206ENST00000464577 SNED1Q8TER0 1413 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 KDM3AQ9Y4C1 1321 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 A0A1B0GUA9 196 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 CFAP73A6NFT4 308 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 FLOT1O75955 427 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 GFPT2O94808 682 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 ATP6V1G2O95670 118 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 PRDX5P30044 214 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 HIBADHP31937 336 aaKnown RBP7.96□□□□□ -1.14
USP48-206ENST00000464577 FLT3P36888 993 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 SLC8A3P57103 927 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 ELF3P78545 371 aaPredicted RBP7.96□□□□□ -1.14
USP48-206ENST00000464577 PTK2Q05397 1052 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 DHX9Q08211 1270 aaKnown RBP7.96□□□□□ -1.14
USP48-206ENST00000464577 PAXIP1Q6ZW49 1069 aaPredicted RBP7.96□□□□□ -1.14
USP48-206ENST00000464577 ZNF571Q7Z3V5 609 aaPredicted RBP7.96□□□□□ -1.14
USP48-206ENST00000464577 PEX26Q7Z412 305 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 KCNK18Q7Z418 384 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 CROCCP2Q86T23 111 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 CEP57Q86XR8 500 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 CCDC65Q8IXS2 484 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 ZNF444Q8N0Y2 327 aaPredicted RBP7.96□□□□□ -1.14
USP48-206ENST00000464577 ANKS4BQ8N8V4 417 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 CCHCR1Q8TD31 782 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 HOOK2Q96ED9 719 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 DYNLL2Q96FJ2 89 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 PGM2Q96G03 612 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 OTUD5Q96G74 571 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 SCLT1Q96NL6 688 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 ZNF317Q96PQ6 595 aaPredicted RBP7.96□□□□□ -1.14
USP48-206ENST00000464577 AP1M1Q9BXS5 423 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 RAB17Q9H0T7 212 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 KCTD10Q9H3F6 313 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 ZNF287Q9HBT7 754 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 BMP2KQ9NSY1 1161 aaPredicted RBP7.96□□□□□ -1.14
USP48-206ENST00000464577 UTP11Q9Y3A2 253 aaKnown RBP7.96□□□□□ -1.14
USP48-206ENST00000464577 PCDHA2Q9Y5H9 948 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 DOT1LQ8TEK3 1739 aa7.96□□□□□ -1.14
USP48-206ENST00000464577 NCANO14594 1321 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 WTIPA6NIX2 430 aaPredicted RBP7.95□□□□□ -1.14
USP48-206ENST00000464577 PHF20L1A8MW92 1017 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 SLC37A4O43826 429 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 H2AFZP0C0S5 128 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 RASA1P20936 1047 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 EPS15P42566 896 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 CRKLP46109 303 aaKnown RBP7.95□□□□□ -1.14
USP48-206ENST00000464577 ARID5AQ03989 594 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 CLUL1Q15846 466 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 ALKBH5Q6P6C2 394 aaKnown RBP7.95□□□□□ -1.14
USP48-206ENST00000464577 H2AFVQ71UI9 128 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 FRMD5Q7Z6J6 570 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 PIGWQ7Z7B1 504 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 VPS36Q86VN1 386 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 DZIP1Q86YF9 867 aaKnown RBP7.95□□□□□ -1.14
USP48-206ENST00000464577 MAB21L3Q8N8X9 362 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 ATP8B4Q8TF62 1192 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 ATXN2LQ8WWM7 1075 aaKnown RBP7.95□□□□□ -1.14
USP48-206ENST00000464577 CUL5Q93034 780 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 ZNF622Q969S3 477 aaKnown RBP eCLIP7.95□□□□□ -1.142e-8■□□□□ 10.8
USP48-206ENST00000464577 HES6Q96HZ4 224 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 NUDT12Q9BQG2 462 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 NOD2Q9HC29 1040 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.95□□□□□ -1.14
USP48-206ENST00000464577 BIN2Q9UBW5 565 aaPredicted RBP7.95□□□□□ -1.14
USP48-206ENST00000464577 AMACRQ9UHK6 382 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 ZNF652Q9Y2D9 606 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 NHSQ6T4R5 1651 aa7.95□□□□□ -1.14
USP48-206ENST00000464577 FRMD3A2A2Y4 597 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 FAM187AA6NFU0 413 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 DCDC2CA8MYV0 355 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 CETN3O15182 167 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 TTI1O43156 1089 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 EDIL3O43854 480 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 TDP2O95551 362 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 GOLGA8HP0CJ92 632 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 ITGA4P13612 1032 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 UCHL3P15374 230 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 SCP2P22307 547 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 KLRK1P26718 216 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 MMP13P45452 471 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 NOVP48745 357 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 ADCY7P51828 1080 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 CLNS1AP54105 237 aaKnown RBP7.94□□□□□ -1.14
USP48-206ENST00000464577 PTENP60484 403 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 PPP4CP60510 307 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 KCNH2Q12809 1159 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 SLMAPQ14BN4 828 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 PPP1R18Q6NYC8 613 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 NT5DC3Q86UY8 548 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 FMNL3Q8IVF7 1028 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 NEDD1Q8NHV4 660 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 TBC1D22AQ8WUA7 517 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 SPAG5Q96R06 1193 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 FMO2Q99518 471 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 ANKRD2Q9GZV1 360 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 NT5C3AQ9H0P0 336 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 RIOX1Q9H6W3 641 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 EBF2Q9HAK2 575 aa7.94□□□□□ -1.14
USP48-206ENST00000464577 TMEM260Q9NX78 707 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms