RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 CXXC1Q9P0U4 656 aaPredicted RBP19.2■□□□□ 0.66
VPS52-215ENST00000464425 SCN5AQ14524 2016 aa19.19■□□□□ 0.66
VPS52-215ENST00000464425 MBLAC1A4D2B0 266 aaPredicted RBP19.19■□□□□ 0.66
VPS52-215ENST00000464425 RSPH10B2B2RC85 870 aa19.19■□□□□ 0.66
VPS52-215ENST00000464425 KIF28PB7ZC32 967 aa19.19■□□□□ 0.66
VPS52-215ENST00000464425 HBP1O60381 514 aa19.19■□□□□ 0.66
VPS52-215ENST00000464425 NBNO60934 754 aa19.19■□□□□ 0.66
VPS52-215ENST00000464425 PFKMP08237 780 aa19.19■□□□□ 0.66
VPS52-215ENST00000464425 RSPH10BP0C881 870 aa19.19■□□□□ 0.66
VPS52-215ENST00000464425 LARP1BQ659C4 914 aaKnown RBP19.19■□□□□ 0.66
VPS52-215ENST00000464425 B3GNT9Q6UX72 402 aa19.19■□□□□ 0.66
VPS52-215ENST00000464425 DNAJB3Q8WWF6 145 aa19.19■□□□□ 0.66
VPS52-215ENST00000464425 HERVK_113Q902F9 699 aa19.19■□□□□ 0.66
VPS52-215ENST00000464425 LAMA2P24043 3122 aaKnown RBP19.18■□□□□ 0.66
VPS52-215ENST00000464425 EML1O00423 815 aa19.18■□□□□ 0.66
VPS52-215ENST00000464425 TBX3O15119 743 aa19.18■□□□□ 0.66
VPS52-215ENST00000464425 BAG4O95429 457 aaKnown RBP19.18■□□□□ 0.66
VPS52-215ENST00000464425 PDIA4P13667 645 aaKnown RBP19.18■□□□□ 0.66
VPS52-215ENST00000464425 MBTPS1Q14703 1052 aa19.18■□□□□ 0.66
VPS52-215ENST00000464425 UGCGQ16739 394 aa19.18■□□□□ 0.66
VPS52-215ENST00000464425 TAF2Q6P1X5 1199 aa19.18■□□□□ 0.66
VPS52-215ENST00000464425 NOSTRINQ8IVI9 506 aa19.18■□□□□ 0.66
VPS52-215ENST00000464425 FAM49AQ9H0Q0 323 aaPredicted RBP19.18■□□□□ 0.66
VPS52-215ENST00000464425 VAV3Q9UKW4 847 aa19.18■□□□□ 0.66
VPS52-215ENST00000464425 ZBBXA8MT70 800 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 ZNF862O60290 1169 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 NEMFO60524 1076 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 KLRC1P26715 233 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 MCM7P33993 719 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 ANP32AP39687 249 aaKnown RBP19.17■□□□□ 0.66
VPS52-215ENST00000464425 PPP2R5CQ13362 524 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 ZNF174Q15697 407 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 CALCRLQ16602 461 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 RASIP1Q5U651 963 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 MCTP1Q6DN14 999 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 MTHFD1LQ6UB35 978 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 SLFN12Q8IYM2 578 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 RDM1Q8NG50 284 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 BBXQ8WY36 941 aaPredicted RBP19.17■□□□□ 0.66
VPS52-215ENST00000464425 TSHZ2Q9NRE2 1034 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 FOXD4L1Q9NU39 408 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 IGSF9BQ9UPX0 1349 aa19.17■□□□□ 0.66
VPS52-215ENST00000464425 SZT2Q5T011 3432 aa19.16■□□□□ 0.66
VPS52-215ENST00000464425 H3BQV1 296 aa19.16■□□□□ 0.66
VPS52-215ENST00000464425 CAND2O75155 1236 aa19.16■□□□□ 0.66
VPS52-215ENST00000464425 PARNO95453 639 aaKnown RBP19.16■□□□□ 0.66
VPS52-215ENST00000464425 OATP04181 439 aa19.16■□□□□ 0.66
VPS52-215ENST00000464425 ACTN1P12814 892 aa19.16■□□□□ 0.66
VPS52-215ENST00000464425 PRKCEQ02156 737 aa19.16■□□□□ 0.66
VPS52-215ENST00000464425 ZNF484Q5JVG2 852 aa19.16■□□□□ 0.66
VPS52-215ENST00000464425 NCAPH2Q6IBW4 605 aa19.16■□□□□ 0.66
VPS52-215ENST00000464425 FAM109BQ6ICB4 259 aaPredicted RBP19.16■□□□□ 0.66
VPS52-215ENST00000464425 RSPH3Q86UC2 560 aa19.16■□□□□ 0.66
VPS52-215ENST00000464425 BANK1Q8NDB2 785 aa19.16■□□□□ 0.66
VPS52-215ENST00000464425 OSBPL7Q9BZF2 842 aa19.16■□□□□ 0.66
VPS52-215ENST00000464425 MTIF3Q9H2K0 278 aaKnown RBP19.16■□□□□ 0.66
VPS52-215ENST00000464425 NRBP2Q9NSY0 501 aa19.16■□□□□ 0.66
VPS52-215ENST00000464425 PCDHA2Q9Y5H9 948 aa19.16■□□□□ 0.66
VPS52-215ENST00000464425 TET1Q8NFU7 2136 aa19.16■□□□□ 0.66
VPS52-215ENST00000464425 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.15■□□□□ 0.66
VPS52-215ENST00000464425 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.15■□□□□ 0.66
VPS52-215ENST00000464425 GRXCR1A8MXD5 290 aa19.15■□□□□ 0.66
VPS52-215ENST00000464425 ZBTB42B2RXF5 422 aa19.15■□□□□ 0.66
VPS52-215ENST00000464425 CHRNA1P02708 482 aa19.15■□□□□ 0.66
VPS52-215ENST00000464425 CXCL10P02778 98 aa19.15■□□□□ 0.66
VPS52-215ENST00000464425 SYT1P21579 422 aa19.15■□□□□ 0.66
VPS52-215ENST00000464425 U2AF2P26368 475 aaKnown RBP eCLIP19.15■□□□□ 0.665e-8■■■■■ 34.6
VPS52-215ENST00000464425 TXKP42681 527 aa19.15■□□□□ 0.66
VPS52-215ENST00000464425 TMEM62Q0P6H9 643 aa19.15■□□□□ 0.66
VPS52-215ENST00000464425 TCTN1Q2MV58 587 aa19.15■□□□□ 0.66
VPS52-215ENST00000464425 FAM167AQ96KS9 214 aa19.15■□□□□ 0.66
VPS52-215ENST00000464425 TMEM60Q9H2L4 133 aa19.15■□□□□ 0.66
VPS52-215ENST00000464425 PCDHA12Q9UN75 941 aa19.15■□□□□ 0.66
VPS52-215ENST00000464425 RBM19Q9Y4C8 960 aaKnown RBP19.15■□□□□ 0.66
VPS52-215ENST00000464425 SLC4A7Q9Y6M7 1214 aa19.15■□□□□ 0.66
VPS52-215ENST00000464425 MYH9P35579 1960 aaKnown RBP19.14■□□□□ 0.65
VPS52-215ENST00000464425 NBR1Q14596 966 aa19.14■□□□□ 0.65
VPS52-215ENST00000464425 FAM26DQ5JW98 314 aa19.14■□□□□ 0.65
VPS52-215ENST00000464425 TTC38Q5R3I4 469 aa19.14■□□□□ 0.65
VPS52-215ENST00000464425 RPAINQ86UA6 219 aa19.14■□□□□ 0.65
VPS52-215ENST00000464425 MTMR9Q96QG7 549 aa19.14■□□□□ 0.65
VPS52-215ENST00000464425 TTC12Q9H892 705 aaPredicted RBP19.14■□□□□ 0.65
VPS52-215ENST00000464425 NOL7Q9UMY1 257 aaKnown RBP19.14■□□□□ 0.65
VPS52-215ENST00000464425 COL1A2P08123 1366 aa19.14■□□□□ 0.65
VPS52-215ENST00000464425 TANC1Q9C0D5 1861 aa19.14■□□□□ 0.65
VPS52-215ENST00000464425 TMEM150BA6NC51 233 aa19.13■□□□□ 0.65
VPS52-215ENST00000464425 DDX11L8A8MPP1 907 aa19.13■□□□□ 0.65
VPS52-215ENST00000464425 PSMC5P62195 406 aa19.13■□□□□ 0.65
VPS52-215ENST00000464425 SMAD3P84022 425 aaKnown RBP19.13■□□□□ 0.65
VPS52-215ENST00000464425 SPIRE1Q08AE8 756 aa19.13■□□□□ 0.65
VPS52-215ENST00000464425 EPHA7Q15375 998 aa19.13■□□□□ 0.65
VPS52-215ENST00000464425 CNKSR3Q6P9H4 555 aa19.13■□□□□ 0.65
VPS52-215ENST00000464425 METTL13Q8N6R0 699 aa19.13■□□□□ 0.65
VPS52-215ENST00000464425 SPRYD3Q8NCJ5 442 aa19.13■□□□□ 0.65
VPS52-215ENST00000464425 DBF4BQ8NFT6 615 aa19.13■□□□□ 0.65
VPS52-215ENST00000464425 SEPT9Q9UHD8 586 aaPredicted RBP19.13■□□□□ 0.65
VPS52-215ENST00000464425 CEP131Q9UPN4 1083 aa19.13■□□□□ 0.65
VPS52-215ENST00000464425 CDY2AQ9Y6F7 541 aa19.13■□□□□ 0.65
VPS52-215ENST00000464425 SMIM35A0A1B0GVV1 85 aa19.12■□□□□ 0.65
VPS52-215ENST00000464425 STBD1O95210 358 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms