RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 RETREG2Q8NC44 543 aa17.34■□□□□ 0.37
RAB11FIP3-208ENST00000464263 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
RAB11FIP3-208ENST00000464263 VWCEQ96DN2 955 aa17.34■□□□□ 0.37
RAB11FIP3-208ENST00000464263 SCLYQ96I15 445 aa17.34■□□□□ 0.37
RAB11FIP3-208ENST00000464263 STBD1O95210 358 aa17.33■□□□□ 0.36
RAB11FIP3-208ENST00000464263 IGBP1P78318 339 aa17.33■□□□□ 0.36
RAB11FIP3-208ENST00000464263 PPIGQ13427 754 aaKnown RBP eCLIP17.33■□□□□ 0.369e-8■□□□□ 11
RAB11FIP3-208ENST00000464263 GPNMBQ14956 572 aa17.33■□□□□ 0.36
RAB11FIP3-208ENST00000464263 EPHA7Q15375 998 aa17.33■□□□□ 0.36
RAB11FIP3-208ENST00000464263 RILPL1Q5EBL4 403 aa17.33■□□□□ 0.36
RAB11FIP3-208ENST00000464263 ZNF484Q5JVG2 852 aa17.33■□□□□ 0.36
RAB11FIP3-208ENST00000464263 CKAP2LQ8IYA6 745 aa17.33■□□□□ 0.36
RAB11FIP3-208ENST00000464263 TRAPPC12Q8WVT3 735 aa17.33■□□□□ 0.36
RAB11FIP3-208ENST00000464263 ZBTB10Q96DT7 871 aa17.33■□□□□ 0.36
RAB11FIP3-208ENST00000464263 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.33■□□□□ 0.36
RAB11FIP3-208ENST00000464263 TET1Q8NFU7 2136 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 COL1A2P08123 1366 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 VPS37CA5D8V6 355 aaPredicted RBP17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 OR52Z1P0C646 297 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 SELPP16109 830 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 PTGDRQ13258 359 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 ZNF618Q5T7W0 954 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 NCAPH2Q6IBW4 605 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 RUFY4Q6ZNE9 571 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 RPAINQ86UA6 219 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 BANK1Q8NDB2 785 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 FAM167AQ96KS9 214 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 IL23AQ9NPF7 189 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 NRBP2Q9NSY0 501 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 TUBE1Q9UJT0 475 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 PCDHA2Q9Y5H9 948 aa17.32■□□□□ 0.36
RAB11FIP3-208ENST00000464263 A0A1W2PPC1 479 aa17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 OATP04181 439 aa17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 P4HBP07237 508 aaKnown RBP17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 KLRC1P26715 233 aa17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 THPOP40225 353 aa17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 QARSP47897 775 aaKnown RBP17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 PSMC5P62195 406 aa17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 PRKCEQ02156 737 aa17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 SHHQ15465 462 aa17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 MTHFD1LQ6UB35 978 aa17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 LRRC8DQ7L1W4 858 aa17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 TRMT1LQ7Z2T5 733 aaKnown RBP17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 BRAPQ7Z569 592 aa17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 NIFKQ9BYG3 293 aaKnown RBP17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 RGL1Q9NZL6 768 aa17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 WRAP73Q9P2S5 460 aaPredicted RBP17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 MTMR6Q9Y217 621 aa17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 LOXHD1Q8IVV2 1947 aa17.31■□□□□ 0.36
RAB11FIP3-208ENST00000464263 RANBP2P49792 3224 aaKnown RBP17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 STX6O43752 255 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 CAND2O75155 1236 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 SLITRK3O94933 977 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 ACRP10323 421 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 RFC2P35250 354 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 TECP42680 631 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 TARBP2Q15633 366 aaKnown RBP17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 XKR3Q5GH77 459 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 FAM26DQ5JW98 314 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 TMEM240Q5SV17 173 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 C9orf50Q5SZB4 431 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 TAF2Q6P1X5 1199 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 FERMT3Q86UX7 667 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 RPUSD2Q8IZ73 545 aaKnown RBP17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 TDHQ8IZJ6 230 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 DYDC2Q96IM9 177 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 HSD17B14Q9BPX1 270 aa17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 EIF2AK1Q9BQI3 630 aaKnown RBP17.3■□□□□ 0.36
RAB11FIP3-208ENST00000464263 SIP14410 1827 aa17.29■□□□□ 0.36
RAB11FIP3-208ENST00000464263 SMIM35A0A1B0GVV1 85 aa17.29■□□□□ 0.36
RAB11FIP3-208ENST00000464263 LAD1O00515 517 aa17.29■□□□□ 0.36
RAB11FIP3-208ENST00000464263 HSP90AA1P07900 732 aaKnown RBP17.29■□□□□ 0.36
RAB11FIP3-208ENST00000464263 RESTQ13127 1097 aa17.29■□□□□ 0.36
RAB11FIP3-208ENST00000464263 MBTPS1Q14703 1052 aa17.29■□□□□ 0.36
RAB11FIP3-208ENST00000464263 IL17AQ16552 155 aa17.29■□□□□ 0.36
RAB11FIP3-208ENST00000464263 ZNF365Q70YC5 407 aa17.29■□□□□ 0.36
RAB11FIP3-208ENST00000464263 ANO5Q75V66 913 aa17.29■□□□□ 0.36
RAB11FIP3-208ENST00000464263 C4orf19Q8IY42 314 aa17.29■□□□□ 0.36
RAB11FIP3-208ENST00000464263 SPRYD3Q8NCJ5 442 aa17.29■□□□□ 0.36
RAB11FIP3-208ENST00000464263 DNAJB3Q8WWF6 145 aa17.29■□□□□ 0.36
RAB11FIP3-208ENST00000464263 CEP89Q96ST8 783 aa17.29■□□□□ 0.36
RAB11FIP3-208ENST00000464263 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.29■□□□□ 0.362e-7■■■□□ 14.8
RAB11FIP3-208ENST00000464263 CEP131Q9UPN4 1083 aa17.29■□□□□ 0.36
RAB11FIP3-208ENST00000464263 TMEM150BA6NC51 233 aa17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 POTEMA6NI47 508 aa17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 DDX11L8A8MPP1 907 aa17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 RSPH10B2B2RC85 870 aa17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 DKC1O60832 514 aaKnown RBP eCLIP17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 NBNO60934 754 aa17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 PARNO95453 639 aaKnown RBP17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 C22orf31O95567 290 aa17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 RSPH10BP0C881 870 aa17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 PRPHP41219 470 aa17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 FXR2P51116 673 aaKnown RBP eCLIP17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 ATP2C1P98194 919 aaPredicted RBP17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 CTTNQ14247 550 aaKnown RBP17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 HABP4Q5JVS0 413 aaKnown RBP17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 DEFB128Q7Z7B8 93 aa17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 LXNQ9BS40 222 aa17.28■□□□□ 0.36
RAB11FIP3-208ENST00000464263 ZSWIM4Q9H7M6 989 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms