RNA–Protein interactions for RNA: ENST00000463741.1

SREBF2-205, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 634 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-205ENST00000463741 STAG3L1P0CL83 205 aa17.27■□□□□ 0.36
SREBF2-205ENST00000463741 NAALADL2Q58DX5 795 aa17.27■□□□□ 0.36
SREBF2-205ENST00000463741 HEATR3Q7Z4Q2 680 aa17.27■□□□□ 0.36
SREBF2-205ENST00000463741 RTN4RL1Q86UN2 441 aaPredicted RBP17.27■□□□□ 0.36
SREBF2-205ENST00000463741 CCDC82Q8N4S0 544 aa17.27■□□□□ 0.36
SREBF2-205ENST00000463741 EFHBQ8N7U6 833 aa17.27■□□□□ 0.36
SREBF2-205ENST00000463741 SPPL3Q8TCT6 385 aa17.27■□□□□ 0.36
SREBF2-205ENST00000463741 JADE2Q9NQC1 790 aa17.27■□□□□ 0.36
SREBF2-205ENST00000463741 CLEC1BQ9P126 229 aa17.27■□□□□ 0.36
SREBF2-205ENST00000463741 LRFN2Q9ULH4 789 aa17.27■□□□□ 0.36
SREBF2-205ENST00000463741 BARX2Q9UMQ3 279 aaPredicted RBP17.27■□□□□ 0.36
SREBF2-205ENST00000463741 PCDHA6Q9UN73 950 aa17.27■□□□□ 0.36
SREBF2-205ENST00000463741 PCDHA8Q9Y5H6 950 aa17.27■□□□□ 0.36
SREBF2-205ENST00000463741 LOXHD1Q8IVV2 1947 aa17.27■□□□□ 0.35
SREBF2-205ENST00000463741 SH2B2O14492 632 aaPredicted RBP17.26■□□□□ 0.35
SREBF2-205ENST00000463741 EYA4O95677 639 aa17.26■□□□□ 0.35
SREBF2-205ENST00000463741 TMEM266Q2M3C6 531 aa17.26■□□□□ 0.35
SREBF2-205ENST00000463741 CRIPAKQ8N1N5 446 aa17.26■□□□□ 0.35
SREBF2-205ENST00000463741 SMRP1Q8NCR6 262 aa17.26■□□□□ 0.35
SREBF2-205ENST00000463741 EDAQ92838 391 aa17.26■□□□□ 0.35
SREBF2-205ENST00000463741 MAP4K1Q92918 833 aa17.26■□□□□ 0.35
SREBF2-205ENST00000463741 SDF4Q9BRK5 362 aa17.26■□□□□ 0.35
SREBF2-205ENST00000463741 KCNH7Q9NS40 1196 aa17.26■□□□□ 0.35
SREBF2-205ENST00000463741 GINS2Q9Y248 185 aa17.26■□□□□ 0.35
SREBF2-205ENST00000463741 PCDHGC5Q9Y5F6 944 aa17.26■□□□□ 0.35
SREBF2-205ENST00000463741 SQORQ9Y6N5 450 aa17.26■□□□□ 0.35
SREBF2-205ENST00000463741 TECTAO75443 2155 aa17.26■□□□□ 0.35
SREBF2-205ENST00000463741 MAFGO15525 162 aa17.25■□□□□ 0.35
SREBF2-205ENST00000463741 PPFIA3O75145 1194 aa17.25■□□□□ 0.35
SREBF2-205ENST00000463741 GLP2RO95838 553 aa17.25■□□□□ 0.35
SREBF2-205ENST00000463741 MCM5P33992 734 aa17.25■□□□□ 0.35
SREBF2-205ENST00000463741 ACTR2P61160 394 aa17.25■□□□□ 0.35
SREBF2-205ENST00000463741 PLCB4Q15147 1175 aa17.25■□□□□ 0.35
SREBF2-205ENST00000463741 SPOUT1Q5T280 376 aaKnown RBP17.25■□□□□ 0.35
SREBF2-205ENST00000463741 TNPO1Q92973 898 aaKnown RBP17.25■□□□□ 0.35
SREBF2-205ENST00000463741 YTHDC1Q96MU7 727 aaKnown RBP17.25■□□□□ 0.35
SREBF2-205ENST00000463741 CELF4Q9BZC1 486 aaKnown RBP17.25■□□□□ 0.35
SREBF2-205ENST00000463741 USP15Q9Y4E8 981 aaPredicted RBP17.25■□□□□ 0.35
SREBF2-205ENST00000463741 PCDHA2Q9Y5H9 948 aa17.25■□□□□ 0.35
SREBF2-205ENST00000463741 TRIOO75962 3097 aa17.24■□□□□ 0.35
SREBF2-205ENST00000463741 CALM1P0DP23 149 aa17.24■□□□□ 0.35
SREBF2-205ENST00000463741 CALM2P0DP24 149 aa17.24■□□□□ 0.35
SREBF2-205ENST00000463741 CALM3P0DP25 149 aa17.24■□□□□ 0.35
SREBF2-205ENST00000463741 KRT76Q01546 638 aa17.24■□□□□ 0.35
SREBF2-205ENST00000463741 NFX1Q12986 1120 aaKnown RBP17.24■□□□□ 0.35
SREBF2-205ENST00000463741 COASYQ13057 564 aa17.24■□□□□ 0.35
SREBF2-205ENST00000463741 TMTC3Q6ZXV5 915 aa17.24■□□□□ 0.35
SREBF2-205ENST00000463741 MICU3Q86XE3 530 aa17.24■□□□□ 0.35
SREBF2-205ENST00000463741 PGBD1Q96JS3 809 aa17.24■□□□□ 0.35
SREBF2-205ENST00000463741 TMEM87BQ96K49 555 aa17.24■□□□□ 0.35
SREBF2-205ENST00000463741 MTA3Q9BTC8 594 aa17.24■□□□□ 0.35
SREBF2-205ENST00000463741 TMX1Q9H3N1 280 aa17.24■□□□□ 0.35
SREBF2-205ENST00000463741 SLC12A7Q9Y666 1083 aa17.24■□□□□ 0.35
SREBF2-205ENST00000463741 SMIM35A0A1B0GVV1 85 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 TMEM221A6NGB7 291 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 M0R296 226 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 SARSP49591 514 aaKnown RBP17.23■□□□□ 0.35
SREBF2-205ENST00000463741 STAT5BP51692 787 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 COL9A3Q14050 684 aaPredicted RBP17.23■□□□□ 0.35
SREBF2-205ENST00000463741 MTHFD1LQ6UB35 978 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 TRIM67Q6ZTA4 783 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 TMTC2Q8N394 836 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 PRSS33Q8NF86 280 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 CYP2W1Q8TAV3 490 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 MICAL1Q8TDZ2 1067 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 PBXIP1Q96AQ6 731 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 MXRA8Q9BRK3 442 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 LRRC2Q9BYS8 371 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 TLE6Q9H808 572 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 PCDHB7Q9Y5E2 793 aa17.23■□□□□ 0.35
SREBF2-205ENST00000463741 NFASCO94856 1347 aa17.22■□□□□ 0.35
SREBF2-205ENST00000463741 KDM3AQ9Y4C1 1321 aa17.22■□□□□ 0.35
SREBF2-205ENST00000463741 LOC730098B7Z3J9 87 aa17.22■□□□□ 0.35
SREBF2-205ENST00000463741 PER2O15055 1255 aa17.22■□□□□ 0.35
SREBF2-205ENST00000463741 RBM10P98175 930 aaKnown RBP17.22■□□□□ 0.35
SREBF2-205ENST00000463741 ITGB3BPQ13352 177 aaPredicted RBP17.22■□□□□ 0.35
SREBF2-205ENST00000463741 PLPPR4Q7Z2D5 763 aa17.22■□□□□ 0.35
SREBF2-205ENST00000463741 SUGP1Q8IWZ8 645 aaKnown RBP17.22■□□□□ 0.35
SREBF2-205ENST00000463741 RPGRIP1Q96KN7 1286 aa17.22■□□□□ 0.35
SREBF2-205ENST00000463741 PHOX2BQ99453 314 aa17.22■□□□□ 0.35
SREBF2-205ENST00000463741 PCDHB12Q9Y5F1 795 aa17.22■□□□□ 0.35
SREBF2-205ENST00000463741 FNDC1Q4ZHG4 1894 aaPredicted RBP17.21■□□□□ 0.35
SREBF2-205ENST00000463741 DENND3A2RUS2 1198 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 TBKBP1A7MCY6 615 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 DDX39AO00148 427 aaKnown RBP17.21■□□□□ 0.35
SREBF2-205ENST00000463741 MGEA5O60502 916 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 RPS6KA5O75582 802 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 ARP10275 920 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 LIFRP42702 1097 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 NAPAP54920 295 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 WWC2Q6AWC2 1192 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 BMP8AQ7Z5Y6 402 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 THNSL1Q8IYQ7 743 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 NME8Q8N427 588 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 PPP1R16BQ96T49 567 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 ERVK-5Q9HDB9 667 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 TLR9Q9NR96 1032 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 AAASQ9NRG9 546 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 HCSTQ9UBK5 93 aa17.21■□□□□ 0.35
SREBF2-205ENST00000463741 CNTNAP5Q8WYK1 1306 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms