RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 TRPC6Q9Y210 931 aa16.62■□□□□ 0.25
SMC1A-204ENST00000463684 PCDHGC5Q9Y5F6 944 aa16.62■□□□□ 0.25
SMC1A-204ENST00000463684 MAFGO15525 162 aa16.61■□□□□ 0.25
SMC1A-204ENST00000463684 GATMP50440 423 aa16.61■□□□□ 0.25
SMC1A-204ENST00000463684 VCPP55072 806 aaKnown RBP16.61■□□□□ 0.25
SMC1A-204ENST00000463684 MTMR1Q13613 665 aa16.61■□□□□ 0.25
SMC1A-204ENST00000463684 PTPN21Q16825 1174 aa16.61■□□□□ 0.25
SMC1A-204ENST00000463684 PDE12Q6L8Q7 609 aaKnown RBP16.61■□□□□ 0.25
SMC1A-204ENST00000463684 FAM43BQ6ZT52 329 aaPredicted RBP16.61■□□□□ 0.25
SMC1A-204ENST00000463684 NME8Q8N427 588 aa16.61■□□□□ 0.25
SMC1A-204ENST00000463684 SUSD6Q92537 303 aa16.61■□□□□ 0.25
SMC1A-204ENST00000463684 ZBTB10Q96DT7 871 aa16.61■□□□□ 0.25
SMC1A-204ENST00000463684 SENP2Q9HC62 589 aa16.61■□□□□ 0.25
SMC1A-204ENST00000463684 PKD2L1Q9P0L9 805 aa16.61■□□□□ 0.25
SMC1A-204ENST00000463684 PCDHA2Q9Y5H9 948 aa16.61■□□□□ 0.25
SMC1A-204ENST00000463684 U3KPZ7 1027 aaPredicted RBP16.61■□□□□ 0.25
SMC1A-204ENST00000463684 IGSF9BQ9UPX0 1349 aa16.61■□□□□ 0.25
SMC1A-204ENST00000463684 TTC3P53804 2025 aa16.6■□□□□ 0.25
SMC1A-204ENST00000463684 ITGB5P18084 799 aa16.6■□□□□ 0.25
SMC1A-204ENST00000463684 SARSP49591 514 aaKnown RBP16.6■□□□□ 0.25
SMC1A-204ENST00000463684 NUBP1P53384 320 aa16.6■□□□□ 0.25
SMC1A-204ENST00000463684 FOXK2Q01167 660 aa16.6■□□□□ 0.25
SMC1A-204ENST00000463684 KRT76Q01546 638 aa16.6■□□□□ 0.25
SMC1A-204ENST00000463684 NFX1Q12986 1120 aaKnown RBP16.6■□□□□ 0.25
SMC1A-204ENST00000463684 DUSP6Q16828 381 aa16.6■□□□□ 0.25
SMC1A-204ENST00000463684 SMC5Q8IY18 1101 aa16.6■□□□□ 0.25
SMC1A-204ENST00000463684 THNSL1Q8IYQ7 743 aa16.6■□□□□ 0.25
SMC1A-204ENST00000463684 CTCFLQ8NI51 663 aaPredicted RBP16.6■□□□□ 0.25
SMC1A-204ENST00000463684 ATP8B4Q8TF62 1192 aa16.6■□□□□ 0.25
SMC1A-204ENST00000463684 PSTPIP2Q9H939 334 aa16.6■□□□□ 0.25
SMC1A-204ENST00000463684 ATG2AQ2TAZ0 1938 aa16.6■□□□□ 0.25
SMC1A-204ENST00000463684 TBKBP1A7MCY6 615 aa16.59■□□□□ 0.25
SMC1A-204ENST00000463684 FGF18O76093 207 aa16.59■□□□□ 0.25
SMC1A-204ENST00000463684 KIF5BP33176 963 aa16.59■□□□□ 0.25
SMC1A-204ENST00000463684 RBM10P98175 930 aaKnown RBP16.59■□□□□ 0.25
SMC1A-204ENST00000463684 NCOA7Q8NI08 942 aa16.59■□□□□ 0.25
SMC1A-204ENST00000463684 SPZ1Q9BXG8 430 aa16.59■□□□□ 0.25
SMC1A-204ENST00000463684 TMEM260Q9NX78 707 aa16.59■□□□□ 0.25
SMC1A-204ENST00000463684 UBIAD1Q9Y5Z9 338 aa16.59■□□□□ 0.25
SMC1A-204ENST00000463684 SMIM35A0A1B0GVV1 85 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 DENND3A2RUS2 1198 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 H0Y858 1186 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 SMARCA1P28370 1054 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 TECP42680 631 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 NUCB1Q02818 461 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 TMEM266Q2M3C6 531 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 ODR4Q5SWX8 454 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 VN1R2Q8NFZ6 395 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 RIPOR3Q96MK2 946 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 MAP3K14Q99558 947 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 LZTS2Q9BRK4 669 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 TMX1Q9H3N1 280 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 JPH1Q9HDC5 661 aaPredicted RBP16.58■□□□□ 0.24
SMC1A-204ENST00000463684 JADE2Q9NQC1 790 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 SLC9A2Q9UBY0 812 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 PUF60Q9UHX1 559 aaKnown RBP16.58■□□□□ 0.24
SMC1A-204ENST00000463684 KDM3AQ9Y4C1 1321 aa16.58■□□□□ 0.24
SMC1A-204ENST00000463684 SPDYE3A6NKU9 549 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 RPS6KA5O75582 802 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 CYP21A2P08686 494 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 STAT5BP51692 787 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 ERVFC1P60507 584 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 AAMPQ13685 434 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 PLCB4Q15147 1175 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 ANKRD54Q6NXT1 300 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 TMEM184AQ6ZMB5 413 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 PLPPR4Q7Z2D5 763 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 TRAPPC12Q8WVT3 735 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 PCYT2Q99447 389 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 ADAM2Q99965 735 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 S1PR5Q9H228 398 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 C1orf112Q9NSG2 853 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 TYW1Q9NV66 732 aaKnown RBP16.57■□□□□ 0.24
SMC1A-204ENST00000463684 GINS2Q9Y248 185 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 NR2E1Q9Y466 385 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 KAT6AQ92794 2004 aa16.57■□□□□ 0.24
SMC1A-204ENST00000463684 DOCK5Q9H7D0 1870 aa16.56■□□□□ 0.24
SMC1A-204ENST00000463684 E7EWF7 191 aa16.56■□□□□ 0.24
SMC1A-204ENST00000463684 GNAQP50148 359 aa16.56■□□□□ 0.24
SMC1A-204ENST00000463684 FAM102BQ5T8I3 360 aa16.56■□□□□ 0.24
SMC1A-204ENST00000463684 MTHFD1LQ6UB35 978 aa16.56■□□□□ 0.24
SMC1A-204ENST00000463684 SLC24A5Q71RS6 500 aa16.56■□□□□ 0.24
SMC1A-204ENST00000463684 COLGALT1Q8NBJ5 622 aa16.56■□□□□ 0.24
SMC1A-204ENST00000463684 IGDCC4Q8TDY8 1250 aa16.56■□□□□ 0.24
SMC1A-204ENST00000463684 SDF4Q9BRK5 362 aa16.56■□□□□ 0.24
SMC1A-204ENST00000463684 APOL5Q9BWW9 433 aa16.56■□□□□ 0.24
SMC1A-204ENST00000463684 IL25Q9H293 177 aa16.56■□□□□ 0.24
SMC1A-204ENST00000463684 TSHZ2Q9NRE2 1034 aa16.56■□□□□ 0.24
SMC1A-204ENST00000463684 RGS18Q9NS28 235 aa16.56■□□□□ 0.24
SMC1A-204ENST00000463684 LZTS1Q9Y250 596 aa16.56■□□□□ 0.24
SMC1A-204ENST00000463684 PROB1E7EW31 1015 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 FSCN2O14926 492 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 GPR182O15218 404 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 GALR2O43603 387 aaPredicted RBP16.55■□□□□ 0.24
SMC1A-204ENST00000463684 DDAH1O94760 285 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 HOXB8P17481 243 aaPredicted RBP16.55■□□□□ 0.24
SMC1A-204ENST00000463684 LAG3P18627 525 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 SP100P23497 879 aaPredicted RBP16.55■□□□□ 0.24
SMC1A-204ENST00000463684 KLRC1P26715 233 aa16.55■□□□□ 0.24
SMC1A-204ENST00000463684 PLPP4Q5VZY2 271 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms