RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 TNFRSF25Q93038 417 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 TIFAQ96CG3 184 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 SH2D3AQ9BRG2 576 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 TEKT3Q9BXF9 490 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 SEMA6BQ9H3T3 888 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 CERS4Q9HA82 394 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 TBC1D22BQ9NU19 505 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 LOXHD1Q8IVV2 1947 aa9.75□□□□□ -0.85
TMEM254-208ENST00000463209 COL4A4P53420 1690 aaPredicted RBP9.74□□□□□ -0.85
TMEM254-208ENST00000463209 MICAL3Q7RTP6 2002 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 LCHNA4D1U4 455 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 MBLAC1A4D2B0 266 aaPredicted RBP9.74□□□□□ -0.85
TMEM254-208ENST00000463209 ZBTB42B2RXF5 422 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 ZNF862O60290 1169 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 PSMD10O75832 226 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 CXCL10P02778 98 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 CA3P07451 260 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 PSAPP07602 524 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 PFKMP08237 780 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 GNAT1P11488 350 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 ACTN1P12814 892 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 XBP1P17861 261 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 KCNJ6P48051 423 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 KRT76Q01546 638 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 TRIM29Q14134 588 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 GRIN2CQ14957 1233 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 RABEP1Q15276 862 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 GALNT17Q6IS24 598 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 ZNF746Q6NUN9 644 aaPredicted RBP9.74□□□□□ -0.85
TMEM254-208ENST00000463209 CNKSR3Q6P9H4 555 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 MTHFD1LQ6UB35 978 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 PLPPR4Q7Z2D5 763 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 BANK1Q8NDB2 785 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 DBF4BQ8NFT6 615 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 ATP8B4Q8TF62 1192 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 ZNF668Q96K58 619 aaPredicted RBP9.74□□□□□ -0.85
TMEM254-208ENST00000463209 MBOAT7Q96N66 472 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 TBC1D32Q96NH3 1257 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 CDX2Q99626 313 aaPredicted RBP9.74□□□□□ -0.85
TMEM254-208ENST00000463209 MTIF3Q9H2K0 278 aaKnown RBP9.74□□□□□ -0.85
TMEM254-208ENST00000463209 DISC1Q9NRI5 854 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 CDY2AQ9Y6F7 541 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 IGSF9BQ9UPX0 1349 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 CDH23Q9H251 3354 aa9.74□□□□□ -0.85
TMEM254-208ENST00000463209 MYH9P35579 1960 aaKnown RBP9.74□□□□□ -0.85
TMEM254-208ENST00000463209 CYP3A7-CYP3A51PA0A087WV96 503 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 WDR64B1ANS9 1081 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 KIF28PB7ZC32 967 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 EML1O00423 815 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 IBSPP21815 317 aaPredicted RBP9.73□□□□□ -0.85
TMEM254-208ENST00000463209 CYP3A7P24462 503 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 KLRC1P26715 233 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 PRKCEQ02156 737 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 MGAT3Q09327 533 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 NBR1Q14596 966 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 LPIN1Q14693 890 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 GPR153Q6NV75 609 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 MIER3Q7Z3K6 550 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 HERC6Q8IVU3 1022 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 C8orf76Q96K31 380 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 RIT2Q99578 217 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 PRDM12Q9H4Q4 367 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 ZNF576Q9H609 170 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 UPF2Q9HAU5 1272 aaKnown RBP9.73□□□□□ -0.85
TMEM254-208ENST00000463209 BMP2KQ9NSY1 1161 aaPredicted RBP9.73□□□□□ -0.85
TMEM254-208ENST00000463209 VAV3Q9UKW4 847 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 GINS2Q9Y248 185 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 PCDHA10Q9Y5I2 948 aa9.73□□□□□ -0.85
TMEM254-208ENST00000463209 MAFBQ9Y5Q3 323 aaPredicted RBP9.73□□□□□ -0.85
TMEM254-208ENST00000463209 RFXAPO00287 272 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 C22orf31O95567 290 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 VTNP04004 478 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 OATP04181 439 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 CD52P31358 61 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 CLCN3P51790 818 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 MRPS6P82932 125 aaKnown RBP9.72□□□□□ -0.85
TMEM254-208ENST00000463209 TMEM266Q2M3C6 531 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 PLEKHG4Q58EX7 1191 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 PPP2R2DQ66LE6 453 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 PLA2G4FQ68DD2 849 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 NCAPH2Q6IBW4 605 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 TAF2Q6P1X5 1199 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 SMAP1Q8IYB5 467 aaPredicted RBP9.72□□□□□ -0.85
TMEM254-208ENST00000463209 MYOCDQ8IZQ8 938 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 LRRC71Q8N4P6 559 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 HAS1Q92839 578 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 TMX3Q96JJ7 454 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 ZSCAN31Q96LW9 406 aaPredicted RBP9.72□□□□□ -0.85
TMEM254-208ENST00000463209 SLC9A7Q96T83 725 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 CDHR5Q9HBB8 845 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 BRMS1Q9HCU9 246 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 WRAP73Q9P2S5 460 aaPredicted RBP9.72□□□□□ -0.85
TMEM254-208ENST00000463209 SEPT9Q9UHD8 586 aaPredicted RBP9.72□□□□□ -0.85
TMEM254-208ENST00000463209 MSRAQ9UJ68 235 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 MTUS1Q9ULD2 1270 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 PCDHA2Q9Y5H9 948 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 ARID2Q68CP9 1835 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 CHD9Q3L8U1 2897 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 EVPLQ92817 2033 aa9.72□□□□□ -0.85
TMEM254-208ENST00000463209 A0A087WWV3 80 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms