RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 SUSD5O60279 629 aa5.91□□□□□ -1.46
USH2A-203ENST00000463147 CDC14BO60729 498 aa5.91□□□□□ -1.46
USH2A-203ENST00000463147 SQSTM1Q13501 440 aa5.91□□□□□ -1.46
USH2A-203ENST00000463147 DDR2Q16832 855 aa5.91□□□□□ -1.46
USH2A-203ENST00000463147 PLEKHG4Q58EX7 1191 aa5.91□□□□□ -1.46
USH2A-203ENST00000463147 TNNI3KQ59H18 835 aa5.91□□□□□ -1.46
USH2A-203ENST00000463147 PHF19Q5T6S3 580 aa5.91□□□□□ -1.46
USH2A-203ENST00000463147 MRGPRGQ86SM5 289 aa5.91□□□□□ -1.46
USH2A-203ENST00000463147 LGR4Q9BXB1 951 aa5.91□□□□□ -1.46
USH2A-203ENST00000463147 CDIP1Q9H305 208 aa5.91□□□□□ -1.46
USH2A-203ENST00000463147 ZNF703Q9H7S9 590 aaPredicted RBP5.91□□□□□ -1.46
USH2A-203ENST00000463147 IFT57Q9NWB7 429 aa5.91□□□□□ -1.46
USH2A-203ENST00000463147 ESYT3A0FGR9 886 aa5.9□□□□□ -1.46
USH2A-203ENST00000463147 RAB11FIP3O75154 756 aa5.9□□□□□ -1.46
USH2A-203ENST00000463147 ZNF888P0CJ79 500 aaPredicted RBP5.9□□□□□ -1.46
USH2A-203ENST00000463147 HHEXQ03014 270 aa5.9□□□□□ -1.46
USH2A-203ENST00000463147 SF1Q15637 639 aaKnown RBP5.9□□□□□ -1.46
USH2A-203ENST00000463147 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.9□□□□□ -1.46
USH2A-203ENST00000463147 FAM178BQ8IXR5 827 aa5.9□□□□□ -1.46
USH2A-203ENST00000463147 ZNF483Q8TF39 744 aaPredicted RBP5.9□□□□□ -1.46
USH2A-203ENST00000463147 C1orf159Q96HA4 380 aa5.9□□□□□ -1.46
USH2A-203ENST00000463147 OR14A2Q96R54 314 aa5.9□□□□□ -1.46
USH2A-203ENST00000463147 FANCLQ9NW38 375 aa5.9□□□□□ -1.46
USH2A-203ENST00000463147 FBXO10Q9UK96 956 aa5.9□□□□□ -1.46
USH2A-203ENST00000463147 NR2E1Q9Y466 385 aa5.9□□□□□ -1.46
USH2A-203ENST00000463147 PLSCR1O15162 318 aa5.89□□□□□ -1.47
USH2A-203ENST00000463147 GNAT1P11488 350 aa5.89□□□□□ -1.47
USH2A-203ENST00000463147 EPHA5P54756 1037 aa5.89□□□□□ -1.47
USH2A-203ENST00000463147 TOP3AQ13472 1001 aaPredicted RBP5.89□□□□□ -1.47
USH2A-203ENST00000463147 NFYCQ13952 458 aa5.89□□□□□ -1.47
USH2A-203ENST00000463147 DENND5AQ6IQ26 1287 aa5.89□□□□□ -1.47
USH2A-203ENST00000463147 C6orf15Q6UXA7 325 aaPredicted RBP5.89□□□□□ -1.47
USH2A-203ENST00000463147 FILIP1Q7Z7B0 1213 aa5.89□□□□□ -1.47
USH2A-203ENST00000463147 IL17DQ8TAD2 202 aa5.89□□□□□ -1.47
USH2A-203ENST00000463147 JAM3Q9BX67 310 aa5.89□□□□□ -1.47
USH2A-203ENST00000463147 NELFAQ9H3P2 528 aa5.89□□□□□ -1.47
USH2A-203ENST00000463147 ACTR10Q9NZ32 417 aa5.89□□□□□ -1.47
USH2A-203ENST00000463147 PUF60Q9UHX1 559 aaKnown RBP5.89□□□□□ -1.47
USH2A-203ENST00000463147 PCSK5Q92824 1860 aa5.88□□□□□ -1.47
USH2A-203ENST00000463147 B2RBV5 119 aa5.88□□□□□ -1.47
USH2A-203ENST00000463147 CYP27B1O15528 508 aa5.88□□□□□ -1.47
USH2A-203ENST00000463147 PDPK1O15530 556 aa5.88□□□□□ -1.47
USH2A-203ENST00000463147 GJB6O95452 261 aa5.88□□□□□ -1.47
USH2A-203ENST00000463147 PEX11BO96011 259 aa5.88□□□□□ -1.47
USH2A-203ENST00000463147 C1SP09871 688 aa5.88□□□□□ -1.47
USH2A-203ENST00000463147 ETV4P43268 484 aa5.88□□□□□ -1.47
USH2A-203ENST00000463147 DGCR2P98153 550 aa5.88□□□□□ -1.47
USH2A-203ENST00000463147 RNF151Q2KHN1 245 aa5.88□□□□□ -1.47
USH2A-203ENST00000463147 KIZQ2M2Z5 673 aa5.88□□□□□ -1.47
USH2A-203ENST00000463147 LDLRAD3Q86YD5 345 aa5.88□□□□□ -1.47
USH2A-203ENST00000463147 ZFYVE21Q9BQ24 234 aa5.88□□□□□ -1.47
USH2A-203ENST00000463147 TACO1Q9BSH4 297 aaKnown RBP5.88□□□□□ -1.47
USH2A-203ENST00000463147 C12orf65Q9H3J6 166 aaKnown RBP5.88□□□□□ -1.47
USH2A-203ENST00000463147 DSEQ9UL01 958 aa5.88□□□□□ -1.47
USH2A-203ENST00000463147 ARHGAP6O43182 974 aa5.87□□□□□ -1.47
USH2A-203ENST00000463147 DIAPH1O60610 1272 aaKnown RBP5.87□□□□□ -1.47
USH2A-203ENST00000463147 GRK2P25098 689 aa5.87□□□□□ -1.47
USH2A-203ENST00000463147 HIBADHP31937 336 aaKnown RBP5.87□□□□□ -1.47
USH2A-203ENST00000463147 GRK3P35626 688 aa5.87□□□□□ -1.47
USH2A-203ENST00000463147 RASGRF1Q13972 1273 aa5.87□□□□□ -1.47
USH2A-203ENST00000463147 TKFCQ3LXA3 575 aa5.87□□□□□ -1.47
USH2A-203ENST00000463147 MRM1Q6IN84 353 aaKnown RBP5.87□□□□□ -1.47
USH2A-203ENST00000463147 KCTD1Q719H9 257 aa5.87□□□□□ -1.47
USH2A-203ENST00000463147 CXXC5Q7LFL8 322 aaKnown RBP5.87□□□□□ -1.47
USH2A-203ENST00000463147 KIAA0907Q7Z7F0 614 aaPredicted RBP5.87□□□□□ -1.47
USH2A-203ENST00000463147 ADGRE4PQ86SQ3 457 aa5.87□□□□□ -1.47
USH2A-203ENST00000463147 RPUSD2Q8IZ73 545 aaKnown RBP5.87□□□□□ -1.47
USH2A-203ENST00000463147 PLA2G12BQ9BX93 195 aa5.87□□□□□ -1.47
USH2A-203ENST00000463147 PCDH12Q9NPG4 1184 aa5.87□□□□□ -1.47
USH2A-203ENST00000463147 PARPBPQ9NWS1 579 aa5.87□□□□□ -1.47
USH2A-203ENST00000463147 PTPN22Q9Y2R2 807 aa5.87□□□□□ -1.47
USH2A-203ENST00000463147 R3HCC1Q9Y3T6 440 aaKnown RBP5.87□□□□□ -1.47
USH2A-203ENST00000463147 COL4A3BPQ9Y5P4 624 aa5.87□□□□□ -1.47
USH2A-203ENST00000463147 IL18BPO95998 194 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 IGBP1P78318 339 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 AMPD3Q01432 767 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 FXNQ16595 210 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 LARP1BQ659C4 914 aaKnown RBP5.86□□□□□ -1.47
USH2A-203ENST00000463147 DPY19L2P1Q6NXN4 242 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 SPATC1Q76KD6 591 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 EEPD1Q7L9B9 569 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 THEMISQ8N1K5 641 aaPredicted RBP5.86□□□□□ -1.47
USH2A-203ENST00000463147 JMYQ8N9B5 988 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 DCAF4Q8WV16 495 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 DPYSL5Q9BPU6 564 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 BRINP2Q9C0B6 783 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 MMRN2Q9H8L6 949 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 TMEM260Q9NX78 707 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 GIT1Q9Y2X7 761 aa5.86□□□□□ -1.47
USH2A-203ENST00000463147 hCG_2014768A0A024R1R8 64 aa5.85□□□□□ -1.47
USH2A-203ENST00000463147 RAMP2O60895 175 aa5.85□□□□□ -1.47
USH2A-203ENST00000463147 CDC45O75419 566 aa5.85□□□□□ -1.47
USH2A-203ENST00000463147 DDAH1O94760 285 aa5.85□□□□□ -1.47
USH2A-203ENST00000463147 CAPNS1P04632 268 aa5.85□□□□□ -1.47
USH2A-203ENST00000463147 GYS2P54840 703 aa5.85□□□□□ -1.47
USH2A-203ENST00000463147 DUSP8Q13202 625 aa5.85□□□□□ -1.47
USH2A-203ENST00000463147 HABP4Q5JVS0 413 aaKnown RBP5.85□□□□□ -1.47
USH2A-203ENST00000463147 ZNF808Q8N4W9 903 aaPredicted RBP5.85□□□□□ -1.47
USH2A-203ENST00000463147 LARP4BQ92615 738 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms