RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 PDXKO00764 312 aa11.21□□□□□ -0.61
MSH5-211ENST00000463144 USP2O75604 605 aaPredicted RBP11.21□□□□□ -0.61
MSH5-211ENST00000463144 DDNO94850 711 aaPredicted RBP11.21□□□□□ -0.61
MSH5-211ENST00000463144 FAM13AO94988 1023 aa11.21□□□□□ -0.61
MSH5-211ENST00000463144 PLEKP08567 350 aaPredicted RBP11.21□□□□□ -0.61
MSH5-211ENST00000463144 MYCLP12524 364 aaPredicted RBP11.21□□□□□ -0.61
MSH5-211ENST00000463144 ZNF131P52739 623 aa11.21□□□□□ -0.61
MSH5-211ENST00000463144 CDK17Q00537 523 aa11.21□□□□□ -0.61
MSH5-211ENST00000463144 MTMR1Q13613 665 aa11.21□□□□□ -0.61
MSH5-211ENST00000463144 TMEM132BQ14DG7 1078 aa11.21□□□□□ -0.61
MSH5-211ENST00000463144 ZC2HC1CQ53FD0 456 aaPredicted RBP11.21□□□□□ -0.61
MSH5-211ENST00000463144 CATSPERGQ6ZRH7 1159 aa11.21□□□□□ -0.61
MSH5-211ENST00000463144 MYCT1Q8N699 235 aa11.21□□□□□ -0.61
MSH5-211ENST00000463144 IQCDQ96DY2 449 aa11.21□□□□□ -0.61
MSH5-211ENST00000463144 PPP2R3BQ9Y5P8 575 aa11.21□□□□□ -0.61
MSH5-211ENST00000463144 LOXHD1Q8IVV2 1947 aa11.21□□□□□ -0.61
MSH5-211ENST00000463144 WDR90Q96KV7 1748 aa11.21□□□□□ -0.61
MSH5-211ENST00000463144 KIF5CO60282 957 aa11.21□□□□□ -0.62
MSH5-211ENST00000463144 P4HBP07237 508 aaKnown RBP11.21□□□□□ -0.62
MSH5-211ENST00000463144 APBA1Q02410 837 aa11.21□□□□□ -0.62
MSH5-211ENST00000463144 MAPK7Q13164 816 aa11.21□□□□□ -0.62
MSH5-211ENST00000463144 COG2Q14746 738 aa11.21□□□□□ -0.62
MSH5-211ENST00000463144 ARHGAP29Q52LW3 1261 aa11.21□□□□□ -0.62
MSH5-211ENST00000463144 NOL9Q5SY16 702 aaKnown RBP11.21□□□□□ -0.62
MSH5-211ENST00000463144 SNRNP48Q6IEG0 339 aaKnown RBP11.21□□□□□ -0.62
MSH5-211ENST00000463144 KSR1Q8IVT5 923 aa11.21□□□□□ -0.62
MSH5-211ENST00000463144 DAW1Q8N136 415 aa11.21□□□□□ -0.62
MSH5-211ENST00000463144 SLC35F6Q8N357 371 aa11.21□□□□□ -0.62
MSH5-211ENST00000463144 ZNF397Q8NF99 534 aaPredicted RBP11.21□□□□□ -0.62
MSH5-211ENST00000463144 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.21□□□□□ -0.62
MSH5-211ENST00000463144 CARD6Q9BX69 1037 aa11.21□□□□□ -0.62
MSH5-211ENST00000463144 TYW1Q9NV66 732 aaKnown RBP11.21□□□□□ -0.62
MSH5-211ENST00000463144 ZNHIT6Q9NWK9 470 aaKnown RBP11.21□□□□□ -0.62
MSH5-211ENST00000463144 ARHGAP20Q9P2F6 1191 aa11.21□□□□□ -0.62
MSH5-211ENST00000463144 PNMA2Q9UL42 364 aa11.21□□□□□ -0.62
MSH5-211ENST00000463144 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.21□□□□□ -0.62
MSH5-211ENST00000463144 MRFAP1Q9Y605 127 aa11.21□□□□□ -0.62
MSH5-211ENST00000463144 MYH11P35749 1972 aa11.21□□□□□ -0.62
MSH5-211ENST00000463144 RCCD1A6NED2 376 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 LRRC53A6NM62 1247 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 EIF3CLB5ME19 914 aaKnown RBP11.2□□□□□ -0.62
MSH5-211ENST00000463144 ZNF263O14978 683 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 CLIC2O15247 247 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 RRP9O43818 475 aaKnown RBP11.2□□□□□ -0.62
MSH5-211ENST00000463144 AKAP3O75969 853 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 CASP4P49662 377 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 ELF2Q15723 593 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 ERCC6LQ2NKX8 1250 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 DPY19L2P1Q6NXN4 242 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.2□□□□□ -0.62
MSH5-211ENST00000463144 ZNF720Q7Z2F6 126 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 CCDC170Q8IYT3 715 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 NEK9Q8TD19 979 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 EIF3CQ99613 913 aaKnown RBP11.2□□□□□ -0.62
MSH5-211ENST00000463144 PARVGQ9HBI0 331 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 ARHGEF35A5YM69 484 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 EIF3DO15371 548 aaKnown RBP eCLIP11.2□□□□□ -0.62
MSH5-211ENST00000463144 CALUO43852 315 aaPredicted RBP11.2□□□□□ -0.62
MSH5-211ENST00000463144 CCNE2O96020 404 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 NR3C1P04150 777 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 GUCY2CP25092 1073 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 KCNH2Q12809 1159 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 HSP90AA2PQ14568 343 aaPredicted RBP11.2□□□□□ -0.62
MSH5-211ENST00000463144 ARHGEF16Q5VV41 709 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 RRAGAQ7L523 313 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 FRMD5Q7Z6J6 570 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 VSIG10LQ86VR7 867 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 GPIHBP1Q8IV16 184 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 NEK11Q8NG66 645 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 CRACR2AQ9BSW2 395 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 PDCL3Q9H2J4 239 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 ZSWIM4Q9H7M6 989 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 TBC1D22BQ9NU19 505 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 KCND2Q9NZV8 630 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 ODF2LQ9ULJ1 636 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 SNCAIPQ9Y6H5 919 aa11.2□□□□□ -0.62
MSH5-211ENST00000463144 CYLC1P35663 651 aaPredicted RBP11.19□□□□□ -0.62
MSH5-211ENST00000463144 OAZ1P54368 228 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 CYP27A1Q02318 531 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 UGCGQ16739 394 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 SUPT20HL1Q3ZLR7 823 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 PDXDC1Q6P996 788 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 PADI6Q6TGC4 694 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 LSM14BQ9BX40 385 aaKnown RBP11.19□□□□□ -0.62
MSH5-211ENST00000463144 STRA6Q9BX79 667 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 EDEM3Q9BZQ6 932 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 FHDC1Q9C0D6 1143 aaPredicted RBP11.19□□□□□ -0.62
MSH5-211ENST00000463144 LACRTQ9GZZ8 138 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 SEL1LQ9UBV2 794 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 FAM184BQ9ULE4 1060 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 SAMM50Q9Y512 469 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 PAPPA2Q9BXP8 1791 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 KIAA1217Q5T5P2 1943 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 TESPA1A2RU30 521 aaPredicted RBP11.19□□□□□ -0.62
MSH5-211ENST00000463144 TMEM150BA6NC51 233 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 SPDYE16A6NNV3 312 aaPredicted RBP11.19□□□□□ -0.62
MSH5-211ENST00000463144 ATP2A1O14983 1001 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 HIP1RO75146 1068 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 TADA3O75528 432 aa11.19□□□□□ -0.62
MSH5-211ENST00000463144 NR3C2P08235 984 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms