RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-223	ENST00000463004	GAS2	O43903	313 aa	Known RBP	12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	NR3C1	P04150	777 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	NR3C2	P08235	984 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	NIPA1	Q7RTP0	329 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	GSTA5	Q7RTV2	222 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	SMYD4	Q8IYR2	804 aa	Predicted RBP	12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	KIAA1524	Q8TCG1	905 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	CCDC127	Q96BQ5	260 aa		12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	CCDC94	Q9BW85	323 aa	Predicted RBP	12.82	□□□□□ -0.36
RBM39-223	ENST00000463004	MED7	O43513	233 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	RFC5	P40937	340 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	GCLC	P48506	637 aa	Predicted RBP	12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	LMAN1	P49257	510 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	MAPK6	Q16659	721 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	MICALCL	Q6ZW33	695 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	GDA	Q9Y2T3	454 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	PPME1	Q9Y570	386 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	ROBO3	Q96MS0	1386 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	DUOX1	Q9NRD9	1551 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004		E9PMD0	336 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	RBL2	Q08999	1139 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	TAX1BP1	Q86VP1	789 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	NCAPG	Q9BPX3	1015 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	LIMA1	Q9UHB6	759 aa	Known RBP	12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	PPP1R9A	Q9ULJ8	1098 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	EIF3D	O15371	548 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	MFAP3L	O75121	409 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	HOXC6	P09630	235 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	DLAT	P10515	647 aa	Known RBP	12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	HSPA6	P17066	643 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	HADH	Q16836	314 aa	Known RBP	12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	ABT1	Q9ULW3	272 aa	Known RBP	12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	PLCB3	Q01970	1234 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	BAAT	Q14032	418 aa	Predicted RBP	12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	PPP1R7	Q15435	360 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	SKIDA1	Q1XH10	827 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	FAM47C	Q5HY64	1035 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	ADSSL1	Q8N142	457 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	RAB17	Q9H0T7	212 aa		12.81	□□□□□ -0.36
RBM39-223	ENST00000463004	NHSL1	Q5SYE7	1610 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	DDTL	A6NHG4	134 aa	Predicted RBP	12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	ASAP2	O43150	1006 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	PEX3	P56589	373 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004		Q4G0T1	1027 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	RBM43	Q6ZSC3	357 aa	Known RBP	12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	CAPZA3	Q96KX2	299 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	NBPF3	Q9H094	633 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	HPSE	Q9Y251	543 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	UTP11	Q9Y3A2	253 aa	Known RBP	12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	THAP12	O43422	761 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	STK10	O94804	968 aa	Known RBP	12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	NSF	P46459	744 aa	Known RBP	12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	GTF2A2	P52657	109 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	SAMD7	Q7Z3H4	446 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	MKNK1	Q9BUB5	465 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	MROH8	Q9H579	483 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	ELP3	Q9H9T3	547 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	GCNT4	Q9P109	453 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	ANKFY1	Q9P2R3	1169 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	GABBR1	Q9UBS5	961 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	PKD1L3	Q7Z443	1732 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	MAGEB2	O15479	319 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	MAN1A1	P33908	653 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	PAK2	Q13177	524 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	CCDC14	Q49A88	953 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	SEPT1	Q8WYJ6	367 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	RPS6KC1	Q96S38	1066 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	TSPYL1	Q9H0U9	437 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	AGTPBP1	Q9UPW5	1226 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	ITIH6	Q6UXX5	1313 aa		12.8	□□□□□ -0.36
RBM39-223	ENST00000463004	CNGA1	P29973	690 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	ATP5D	P30049	168 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	LACTB	P83111	547 aa	Predicted RBP	12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	BRD3	Q15059	726 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	MFSD14C	Q5VZR4	134 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	USP50	Q70EL3	339 aa	Predicted RBP	12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	KLRG2	A4D1S0	409 aa	Predicted RBP	12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	EFCAB8	A8MWE9	144 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	GAS8	O95995	478 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	PKN1	Q16512	942 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	TAF12	Q16514	161 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	TAF3	Q5VWG9	929 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	ZNF365	Q70YC5	407 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	DPH6	Q7L8W6	267 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	RPF1	Q9H9Y2	349 aa	Known RBP	12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	IL17RB	Q9NRM6	502 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	POTEF	A5A3E0	1075 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	POTEI	P0CG38	1075 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	MYO1E	Q12965	1108 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	POTEG	Q6S5H5	508 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	POTEE	Q6S8J3	1075 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	PTF1A	Q7RTS3	328 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	NBPF11	Q86T75	865 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	MRPL47	Q9HD33	250 aa	Known RBP	12.79	□□□□□ -0.36
RBM39-223	ENST00000463004		H0YHG0	523 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	CEP104	O60308	925 aa		12.79	□□□□□ -0.36
RBM39-223	ENST00000463004	PLA2G6	O60733	806 aa		12.79	□□□□□ -0.36

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