RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	FAM20A	Q96MK3	541 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	CTAGE1	Q96RT6	745 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.83	□□□□□ -0.68	3e-6	■□□□□ 9.3
PSMD4-208	ENST00000462970	FOXP1	Q9H334	677 aa	Predicted RBP	10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970	TUBE1	Q9UJT0	475 aa		10.83	□□□□□ -0.68
PSMD4-208	ENST00000462970		A0A1W2PPC1	479 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	RRN3P2	A6NIE6	340 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970		K7ELQ4	463 aa	Predicted RBP	10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	WNT7A	O00755	349 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	HBP1	O60381	514 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	IQCF3	P0C7M6	154 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	SLC26A2	P50443	739 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	PRKCE	Q02156	737 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	NBR1	Q14596	966 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	UGCG	Q16739	394 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	TTC38	Q5R3I4	469 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	TMEM240	Q5SV17	173 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	PSRC1	Q6PGN9	363 aa	Predicted RBP	10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	OTOP2	Q7RTS6	562 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	RSPH3	Q86UC2	560 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	SLFN12	Q8IYM2	578 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	BANK1	Q8NDB2	785 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	ATP8B4	Q8TF62	1192 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	KCNMB3	Q9NPA1	279 aa		10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.82	□□□□□ -0.68
PSMD4-208	ENST00000462970	IGKV6D-21	A0A0A0MT36	114 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	DDX11L8	A8MPP1	907 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	RSPH10B2	B2RC85	870 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	EML1	O00423	815 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	TBX3	O15119	743 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	RSPH10B	P0C881	870 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	ACTN1	P12814	892 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	KLRC1	P26715	233 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	RFC2	P35250	354 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	TMEM62	Q0P6H9	643 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	CUL4A	Q13619	759 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	TRIM71	Q2Q1W2	868 aa	Known RBP	10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	ZNF484	Q5JVG2	852 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970		Q7L0L9	218 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	C16orf59	Q7L2K0	433 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	METTL13	Q8N6R0	699 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	SPRYD3	Q8NCJ5	442 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	DNAJB3	Q8WWF6	145 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	HAS1	Q92839	578 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	FAM167A	Q96KS9	214 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	MTIF3	Q9H2K0	278 aa	Known RBP	10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	NRBP2	Q9NSY0	501 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	VAV3	Q9UKW4	847 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	LAMA2	P24043	3122 aa	Known RBP	10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	GBF1	Q92538	1859 aa		10.81	□□□□□ -0.68
PSMD4-208	ENST00000462970	TMEM150B	A6NC51	233 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970		M0QZ92	97 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	ZNF862	O60290	1169 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	OAT	P04181	439 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	OR52Z1	P0C646	297 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	ATP4A	P20648	1035 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	HOXC8	P31273	242 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	CYP4A11	Q02928	519 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	PPP2R5C	Q13362	524 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	MTERF2	Q49AM1	385 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	MARCH8	Q5T0T0	291 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	TAF2	Q6P1X5	1199 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	MTHFD1L	Q6UB35	978 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	FERMT3	Q86UX7	667 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	RDM1	Q8NG50	284 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	BBX	Q8WY36	941 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	PPP1R16B	Q96T49	567 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	SH2D3A	Q9BRG2	576 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	TMEM60	Q9H2L4	133 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	TTC12	Q9H892	705 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	PCDHA12	Q9UN75	941 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	GINS2	Q9Y248	185 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	IGSF9B	Q9UPX0	1349 aa		10.8	□□□□□ -0.68
PSMD4-208	ENST00000462970	SI	P14410	1827 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	COL1A2	P08123	1366 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	MYO9B	Q13459	2157 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	NBN	O60934	754 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	PFKM	P08237	780 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	PDC	P20941	246 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	U2AF2	P26368	475 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	QARS	P47897	775 aa	Known RBP	10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	KCNJ6	P48051	423 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	PSMC5	P62195	406 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	ADAM17	P78536	824 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	MRPS6	P82932	125 aa	Known RBP	10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	RBL2	Q08999	1139 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	CTTN	Q14247	550 aa	Known RBP	10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	TMEM266	Q2M3C6	531 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	PLA2G4F	Q68DD2	849 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	TPH2	Q8IWU9	490 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	DYDC2	Q96IM9	177 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	CCDC43	Q96MW1	224 aa	Known RBP	10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	SCLT1	Q96NL6	688 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	SUGCT	Q9HAC7	445 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	RGL1	Q9NZL6	768 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	CEP131	Q9UPN4	1083 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	PCDHB6	Q9Y5E3	794 aa		10.79	□□□□□ -0.68
PSMD4-208	ENST00000462970	CDY2A	Q9Y6F7	541 aa		10.79	□□□□□ -0.68

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