RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 PTPN21Q16825 1174 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 NAALADL2Q58DX5 795 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 DGKHQ86XP1 1220 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 TBC1D10CQ8IV04 446 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 LMBR1Q8WVP7 490 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 ATOH1Q92858 354 aaPredicted RBP8.99□□□□□ -0.97
SMC3-202ENST00000462899 JMJD4Q9H9V9 463 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 TLR9Q9NR96 1032 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 MRPL11Q9Y3B7 192 aaKnown RBP8.99□□□□□ -0.97
SMC3-202ENST00000462899 TELO2Q9Y4R8 837 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 MRPL42Q9Y6G3 142 aaKnown RBP8.99□□□□□ -0.97
SMC3-202ENST00000462899 NEDD4P46934 1319 aa8.99□□□□□ -0.97
SMC3-202ENST00000462899 A0A0D9SFI3 127 aa8.98□□□□□ -0.97
SMC3-202ENST00000462899 SORBS3O60504 671 aa8.98□□□□□ -0.97
SMC3-202ENST00000462899 GHRP10912 638 aa8.98□□□□□ -0.97
SMC3-202ENST00000462899 PCP11498 1178 aaKnown RBP8.98□□□□□ -0.97
SMC3-202ENST00000462899 BTG3Q14201 252 aaPredicted RBP8.98□□□□□ -0.97
SMC3-202ENST00000462899 RRP12Q5JTH9 1297 aaKnown RBP8.98□□□□□ -0.97
SMC3-202ENST00000462899 RUFY4Q6ZNE9 571 aa8.98□□□□□ -0.97
SMC3-202ENST00000462899 ZNF589Q86UQ0 364 aaPredicted RBP8.98□□□□□ -0.97
SMC3-202ENST00000462899 PACS2Q86VP3 889 aa8.98□□□□□ -0.97
SMC3-202ENST00000462899 TRIM50Q86XT4 487 aa8.98□□□□□ -0.97
SMC3-202ENST00000462899 CMTR2Q8IYT2 770 aaKnown RBP8.98□□□□□ -0.97
SMC3-202ENST00000462899 PNMA1Q8ND90 353 aa8.98□□□□□ -0.97
SMC3-202ENST00000462899 RIPOR3Q96MK2 946 aa8.98□□□□□ -0.97
SMC3-202ENST00000462899 GPR20Q99678 358 aa8.98□□□□□ -0.97
SMC3-202ENST00000462899 CHMP4BQ9H444 224 aaKnown RBP8.98□□□□□ -0.97
SMC3-202ENST00000462899 SETD4Q9NVD3 440 aa8.98□□□□□ -0.97
SMC3-202ENST00000462899 MAP3K20Q9NYL2 800 aaKnown RBP8.98□□□□□ -0.97
SMC3-202ENST00000462899 SUPT16HQ9Y5B9 1047 aaKnown RBP8.98□□□□□ -0.97
SMC3-202ENST00000462899 PCDHGC5Q9Y5F6 944 aa8.98□□□□□ -0.97
SMC3-202ENST00000462899 ACACBO00763 2458 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 EVPLQ92817 2033 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 MBLAC1A4D2B0 266 aaPredicted RBP8.97□□□□□ -0.97
SMC3-202ENST00000462899 CSPG5O95196 566 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 CFBP00751 764 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 NRIP1P48552 1158 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 MRPS9P82933 396 aaKnown RBP8.97□□□□□ -0.97
SMC3-202ENST00000462899 RBM10P98175 930 aaKnown RBP8.97□□□□□ -0.97
SMC3-202ENST00000462899 SLC35G1Q2M3R5 365 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 ASPRV1Q53RT3 343 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 FBXO47Q5MNV8 452 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 C20orf194Q5TEA3 1177 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 METTL7BQ6UX53 244 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 TMEM184AQ6ZMB5 413 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 NUDT18Q6ZVK8 323 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 RTN4RL1Q86UN2 441 aaPredicted RBP8.97□□□□□ -0.97
SMC3-202ENST00000462899 SAMD3Q8N6K7 520 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 TMEM105Q8N8V8 129 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 KLHL23Q8NBE8 558 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 POF1BQ8WVV4 589 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 PPP2R3CQ969Q6 453 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 INPP4AQ96PE3 977 aaPredicted RBP8.97□□□□□ -0.97
SMC3-202ENST00000462899 USP26Q9BXU7 913 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 S1PR5Q9H228 398 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 AGO3Q9H9G7 860 aaKnown RBP8.97□□□□□ -0.97
SMC3-202ENST00000462899 HELLSQ9NRZ9 838 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 CHD6Q8TD26 2715 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 WDR81Q562E7 1941 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 C2orf16Q68DN1 1984 aa8.97□□□□□ -0.97
SMC3-202ENST00000462899 FSCN2O14926 492 aa8.96□□□□□ -0.98
SMC3-202ENST00000462899 GNAT1P11488 350 aa8.96□□□□□ -0.98
SMC3-202ENST00000462899 MYCLP12524 364 aaPredicted RBP8.96□□□□□ -0.98
SMC3-202ENST00000462899 NT5C2P49902 561 aa8.96□□□□□ -0.98
SMC3-202ENST00000462899 HAND2P61296 217 aa8.96□□□□□ -0.98
SMC3-202ENST00000462899 HNRNPUQ00839 825 aaKnown RBP eCLIP8.96□□□□□ -0.98
SMC3-202ENST00000462899 DUSP6Q16828 381 aa8.96□□□□□ -0.98
SMC3-202ENST00000462899 TSHZ1Q6ZSZ6 1077 aa8.96□□□□□ -0.98
SMC3-202ENST00000462899 TTC13Q8NBP0 860 aa8.96□□□□□ -0.98
SMC3-202ENST00000462899 RNF166Q96A37 237 aaPredicted RBP8.96□□□□□ -0.98
SMC3-202ENST00000462899 RPGRIP1Q96KN7 1286 aa8.96□□□□□ -0.98
SMC3-202ENST00000462899 FAM227BQ96M60 508 aa8.96□□□□□ -0.98
SMC3-202ENST00000462899 ZKSCAN3Q9BRR0 538 aa8.96□□□□□ -0.98
SMC3-202ENST00000462899 MLXIPQ9HAP2 919 aa8.96□□□□□ -0.98
SMC3-202ENST00000462899 TOMM22Q9NS69 142 aa8.96□□□□□ -0.98
SMC3-202ENST00000462899 NRCAMQ92823 1304 aa8.96□□□□□ -0.98
SMC3-202ENST00000462899 SPATA31C2B4DYI2 1134 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 MX1P20591 662 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 CCND2P30279 289 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 HOXA13P31271 388 aaPredicted RBP8.95□□□□□ -0.98
SMC3-202ENST00000462899 ARHGAP4P98171 946 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 MARCH8Q5T0T0 291 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 TAF2Q6P1X5 1199 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 SYCE2Q6PIF2 218 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 MFSD6Q6ZSS7 791 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 TICAM2Q86XR7 235 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 NPAS4Q8IUM7 802 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 STAG2Q8N3U4 1231 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 ENAHQ8N8S7 591 aaPredicted RBP8.95□□□□□ -0.98
SMC3-202ENST00000462899 RASGRP4Q8TDF6 673 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 TATDN2Q93075 761 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 KCTD12Q96CX2 325 aaKnown RBP8.95□□□□□ -0.98
SMC3-202ENST00000462899 CDCA3Q99618 268 aaPredicted RBP8.95□□□□□ -0.98
SMC3-202ENST00000462899 AMNQ9BXJ7 453 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 SQORQ9Y6N5 450 aa8.95□□□□□ -0.98
SMC3-202ENST00000462899 SPTBN2O15020 2390 aa8.94□□□□□ -0.98
SMC3-202ENST00000462899 USP24Q9UPU5 2620 aa8.94□□□□□ -0.98
SMC3-202ENST00000462899 FSD2A1L4K1 749 aa8.94□□□□□ -0.98
SMC3-202ENST00000462899 GOLGA8CPA6NN73 597 aa8.94□□□□□ -0.98
SMC3-202ENST00000462899 ZBTB5O15062 677 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms