RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 AREL1O15033 823 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 OIP5O43482 229 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 NOP2P46087 812 aaKnown RBP3.73□□□□□ -1.81
SMC4-203ENST00000462668 ALDH6A1Q02252 535 aaKnown RBP3.73□□□□□ -1.81
SMC4-203ENST00000462668 NMIQ13287 307 aaPredicted RBP3.73□□□□□ -1.81
SMC4-203ENST00000462668 PUM3Q15397 648 aaKnown RBP3.73□□□□□ -1.81
SMC4-203ENST00000462668 RNF220Q5VTB9 566 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 MZT2BQ6NZ67 158 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 SPATA5Q8NB90 893 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 NAXEQ8NCW5 288 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 SKA1Q96BD8 255 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 ARL8AQ96BM9 186 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 ZNF496Q96IT1 587 aaPredicted RBP3.73□□□□□ -1.81
SMC4-203ENST00000462668 MKS1Q9NXB0 559 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 SRPK3Q9UPE1 567 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 SLC45A1Q9Y2W3 748 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 PCDHA11Q9Y5I1 949 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 CUX2O14529 1486 aa3.73□□□□□ -1.81
SMC4-203ENST00000462668 TADA3O75528 432 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 PFKMP08237 780 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 SNRPBP14678 240 aaKnown RBP3.72□□□□□ -1.81
SMC4-203ENST00000462668 CATSPEREQ5SY80 951 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 TANGO2Q6ICL3 276 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 ZNF280DQ6N043 979 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 MAEAQ7L5Y9 396 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 C2orf69Q8N8R5 385 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 NSUN6Q8TEA1 469 aaKnown RBP3.72□□□□□ -1.81
SMC4-203ENST00000462668 RAX2Q96IS3 184 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 TNIP3Q96KP6 325 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 ZDHHC15Q96MV8 337 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 TTLL2Q9BWV7 592 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 STXBP3O00186 592 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 ST8SIA5O15466 376 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 HTRA2O43464 458 aaPredicted RBP3.72□□□□□ -1.81
SMC4-203ENST00000462668 IFNGR1P15260 489 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 ZNF543Q08ER8 600 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 FSTL1Q12841 308 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 CNN3Q15417 329 aaKnown RBP3.72□□□□□ -1.81
SMC4-203ENST00000462668 CRY1Q16526 586 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 RNFT1Q5M7Z0 435 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 PPP1R14CQ8TAE6 165 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 ERP27Q96DN0 273 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 CCDC138Q96M89 665 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 DMRTA2Q96SC8 542 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 TNFAIP2Q03169 654 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 SLC9A5Q14940 896 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 ZNF827Q17R98 1081 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 UVSSAQ2YD98 709 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 ZBTB41Q5SVQ8 909 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 C1orf228Q6PIY5 440 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 THEMISQ8N1K5 641 aaPredicted RBP3.72□□□□□ -1.81
SMC4-203ENST00000462668 PARD3BQ8TEW8 1205 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 RSAD2Q8WXG1 361 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 DPH1Q9BZG8 443 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 SEMA4AQ9H3S1 761 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 UNC45AQ9H3U1 944 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 GPRC5BQ9NZH0 403 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 CLEC1BQ9P126 229 aa3.72□□□□□ -1.81
SMC4-203ENST00000462668 THOC2Q8NI27 1593 aaKnown RBP3.72□□□□□ -1.81
SMC4-203ENST00000462668 ENDOUP21128 410 aaKnown RBP3.71□□□□□ -1.81
SMC4-203ENST00000462668 PRIM2P49643 509 aa3.71□□□□□ -1.81
SMC4-203ENST00000462668 DARS2Q6PI48 645 aaKnown RBP3.71□□□□□ -1.81
SMC4-203ENST00000462668 SIMC1Q8NDZ2 872 aa3.71□□□□□ -1.81
SMC4-203ENST00000462668 ZNF384Q8TF68 577 aa3.71□□□□□ -1.81
SMC4-203ENST00000462668 PPP1R14AQ96A00 147 aa3.71□□□□□ -1.81
SMC4-203ENST00000462668 APIPQ96GX9 242 aa3.71□□□□□ -1.81
SMC4-203ENST00000462668 DUSP23Q9BVJ7 150 aa3.71□□□□□ -1.81
SMC4-203ENST00000462668 MRPL18Q9H0U6 180 aaKnown RBP3.71□□□□□ -1.81
SMC4-203ENST00000462668 TMEM8AQ9HCN3 771 aa3.71□□□□□ -1.81
SMC4-203ENST00000462668 MINPP1Q9UNW1 487 aa3.71□□□□□ -1.81
SMC4-203ENST00000462668 TIMM13Q9Y5L4 95 aaPredicted RBP3.71□□□□□ -1.81
SMC4-203ENST00000462668 C7orf72A4D263 438 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 SLC16A6O15403 523 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 PLA2G6O60733 806 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 HSP90AA1P07900 732 aaKnown RBP3.71□□□□□ -1.82
SMC4-203ENST00000462668 HTR1BP28222 390 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 ASPAP45381 313 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 GEMIN4P57678 1058 aaKnown RBP3.71□□□□□ -1.82
SMC4-203ENST00000462668 MPP1Q00013 466 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 POU5F1Q01860 360 aaKnown RBP3.71□□□□□ -1.82
SMC4-203ENST00000462668 DUOXA2Q1HG44 320 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 CCDC93Q567U6 631 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 PITRM1Q5JRX3 1037 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 NOL9Q5SY16 702 aaKnown RBP3.71□□□□□ -1.82
SMC4-203ENST00000462668 MBNL2Q5VZF2 373 aaKnown RBP3.71□□□□□ -1.82
SMC4-203ENST00000462668 DMRTC2Q8IXT2 367 aaPredicted RBP3.71□□□□□ -1.82
SMC4-203ENST00000462668 MARCH10Q8NA82 808 aaPredicted RBP3.71□□□□□ -1.82
SMC4-203ENST00000462668 PLEKHO2Q8TD55 490 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 NELL2Q99435 816 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 MIPEPQ99797 713 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 FBXL21Q9UKT6 434 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 STXBP5LQ9Y2K9 1186 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 GOLGA8AA7E2F4 631 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 GOLGA8BA8MQT2 603 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 PDE6AP16499 860 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 PAMP19021 973 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 FUT4P22083 530 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 CACNB3P54284 484 aa3.71□□□□□ -1.82
SMC4-203ENST00000462668 SRSF2Q01130 221 aaKnown RBP3.71□□□□□ -1.82
SMC4-203ENST00000462668 TNK2Q07912 1038 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms