RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 TAF1CQ15572 869 aaPredicted RBP16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 LY6KQ17RY6 165 aa16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 UTP14CQ5TAP6 766 aaKnown RBP16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 CENPPQ6IPU0 288 aa16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 SWSAP1Q6NVH7 229 aa16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 IFNL1Q8IU54 200 aa16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 DBR1Q9UK59 544 aaKnown RBP16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 ABT1Q9ULW3 272 aaKnown RBP16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 SYNGAP1Q96PV0 1343 aa16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 FARP2O94887 1054 aaPredicted RBP16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 PTMAP06454 111 aaKnown RBP16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 CDK11BP21127 795 aaKnown RBP16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 TPD52L1Q16890 204 aaPredicted RBP16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 CCDC144BQ3MJ40 725 aa16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 PLA2G4FQ68DD2 849 aa16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 PADI6Q6TGC4 694 aa16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 ABRAQ8N0Z2 381 aa16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 TRIM44Q96DX7 344 aaPredicted RBP16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 PDGFCQ9NRA1 345 aa16.65■□□□□ 0.26
RPRD1B-203ENST00000462548 B4DLN1 442 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 BACH1O14867 736 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 ATG7O95352 703 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 PSAPP07602 524 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 SUPT20HL2P0C7V6 817 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 PTGS1P23219 599 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 NPEPPSP55786 919 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 MAPK7Q13164 816 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 GRB14Q14449 540 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 ANO5Q75V66 913 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 ARMCX2Q7L311 632 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 DRC7Q8IY82 874 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 DAW1Q8N136 415 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 SCFD1Q8WVM8 642 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 TRIM47Q96LD4 638 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 RRAGDQ9NQL2 400 aaPredicted RBP16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 DDX41Q9UJV9 622 aaKnown RBP16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 STRNO43815 780 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 HSP90AA2PQ14568 343 aaPredicted RBP16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 MYOCDQ8IZQ8 938 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 EEF2KMTQ96G04 330 aa16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 MPHOSPH6Q99547 160 aaKnown RBP16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 SRRTQ9BXP5 876 aaKnown RBP16.64■□□□□ 0.25
RPRD1B-203ENST00000462548 GSTTP1A0A1W2PQM5 241 aa16.63■□□□□ 0.25
RPRD1B-203ENST00000462548 TBCAO75347 108 aaKnown RBP16.63■□□□□ 0.25
RPRD1B-203ENST00000462548 GGPS1O95749 300 aa16.63■□□□□ 0.25
RPRD1B-203ENST00000462548 GUCY2CP25092 1073 aa16.63■□□□□ 0.25
RPRD1B-203ENST00000462548 PPP1R2P41236 205 aa16.63■□□□□ 0.25
RPRD1B-203ENST00000462548 CCDC62Q6P9F0 684 aa16.63■□□□□ 0.25
RPRD1B-203ENST00000462548 PLEKHH3Q7Z736 793 aa16.63■□□□□ 0.25
RPRD1B-203ENST00000462548 ZCCHC17Q9NP64 241 aaKnown RBP16.63■□□□□ 0.25
RPRD1B-203ENST00000462548 IVNS1ABPQ9Y6Y0 642 aa16.63■□□□□ 0.25
RPRD1B-203ENST00000462548 ASB14A6NK59 587 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 TMEM88BA6NKF7 163 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 MYBP10242 640 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 TGFB3P10600 412 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 ATP4AP20648 1035 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 MIS18BP1Q6P0N0 1132 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 MAEAQ7L5Y9 396 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 EPM2AIP1Q7L775 607 aaPredicted RBP16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 NELFCDQ8IXH7 590 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 COPS5Q92905 334 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 ZNF830Q96NB3 372 aaPredicted RBP16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 FIZ1Q96SL8 496 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 PCYT2Q99447 389 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 COL4A3BPQ9Y5P4 624 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 IGSF9BQ9UPX0 1349 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 USO1O60763 962 aaKnown RBP16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 HIP1RO75146 1068 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 FAM13AO94988 1023 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 MAPK4P31152 587 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 HOXD13P35453 343 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 ZNF131P52739 623 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 ZCWPW2Q504Y3 356 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 CSGALNACT2Q8N6G5 542 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 KCND2Q9NZV8 630 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 DOCK3Q8IZD9 2030 aa16.62■□□□□ 0.25
RPRD1B-203ENST00000462548 LOC102724159A0A0B4J2E5 919 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 BICDL2A1A5D9 508 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 KCNJ18B7U540 433 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 KCNJ12Q14500 433 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 NEDD9Q14511 834 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 PWP2Q15269 919 aaKnown RBP16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 KRT31Q15323 416 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 XKR9Q5GH70 373 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 TCP11X2Q5H9J9 407 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 C17orf99Q6UX52 265 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 CCDC186Q7Z3E2 898 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 NPLOC4Q8TAT6 608 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 CCDC102AQ96A19 550 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 KATNBL1Q9H079 304 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 ANKEF1Q9NU02 776 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 LIMA1Q9UHB6 759 aaKnown RBP16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 IGKV6D-21A0A0A0MT36 114 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 A0A1B0GTH6 734 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 NKRFO15226 690 aaKnown RBP eCLIP16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 GAP43P17677 238 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 NMT1P30419 496 aaKnown RBP16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 PRKCEQ02156 737 aa16.61■□□□□ 0.25
RPRD1B-203ENST00000462548 GRM1Q13255 1194 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms