RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 PLA2G4BP0C869 781 aa11.91□□□□□ -0.5
RTF1-202ENST00000462276 CNGA1P29973 690 aa11.91□□□□□ -0.5
RTF1-202ENST00000462276 YWHABP31946 246 aaKnown RBP11.91□□□□□ -0.5
RTF1-202ENST00000462276 SP4Q02446 784 aa11.91□□□□□ -0.5
RTF1-202ENST00000462276 CTTNQ14247 550 aaKnown RBP11.91□□□□□ -0.5
RTF1-202ENST00000462276 CAVIN1Q6NZI2 390 aaKnown RBP11.91□□□□□ -0.5
RTF1-202ENST00000462276 FBXO46Q6PJ61 603 aaPredicted RBP11.91□□□□□ -0.5
RTF1-202ENST00000462276 POTEGQ6S5H5 508 aa11.91□□□□□ -0.5
RTF1-202ENST00000462276 BBXQ8WY36 941 aaPredicted RBP11.91□□□□□ -0.5
RTF1-202ENST00000462276 COPS5Q92905 334 aa11.91□□□□□ -0.5
RTF1-202ENST00000462276 CCDC47Q96A33 483 aaKnown RBP11.91□□□□□ -0.5
RTF1-202ENST00000462276 PAGE5Q96GU1 130 aa11.91□□□□□ -0.5
RTF1-202ENST00000462276 NIFKQ9BYG3 293 aaKnown RBP11.91□□□□□ -0.5
RTF1-202ENST00000462276 BCAS3Q9H6U6 928 aa11.91□□□□□ -0.5
RTF1-202ENST00000462276 BLOC1S4Q9NUP1 217 aa11.91□□□□□ -0.5
RTF1-202ENST00000462276 DDX20Q9UHI6 824 aaKnown RBP11.91□□□□□ -0.5
RTF1-202ENST00000462276 KCNG1Q9UIX4 513 aa11.91□□□□□ -0.5
RTF1-202ENST00000462276 PLXNB2O15031 1838 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 ARHGEF35A5YM69 484 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 HBP1O60381 514 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 MMP3P08254 477 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 CST5P28325 142 aaPredicted RBP11.9□□□□□ -0.5
RTF1-202ENST00000462276 LBX1P52954 281 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 MDM2Q00987 491 aaPredicted RBP11.9□□□□□ -0.5
RTF1-202ENST00000462276 POSTNQ15063 836 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 ECM1Q16610 540 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 FSCN1Q16658 493 aaKnown RBP11.9□□□□□ -0.5
RTF1-202ENST00000462276 SLC9C1Q4G0N8 1177 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 RBM43Q6ZSC3 357 aaKnown RBP11.9□□□□□ -0.5
RTF1-202ENST00000462276 CCDC60Q8IWA6 550 aaPredicted RBP11.9□□□□□ -0.5
RTF1-202ENST00000462276 CKAP2LQ8IYA6 745 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 PCSK9Q8NBP7 692 aaKnown RBP11.9□□□□□ -0.5
RTF1-202ENST00000462276 BANK1Q8NDB2 785 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 ATP8B4Q8TF62 1192 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 CCDC43Q96MW1 224 aaKnown RBP11.9□□□□□ -0.5
RTF1-202ENST00000462276 GSDMAQ96QA5 445 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 C7orf25Q9BPX7 421 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 JPH2Q9BR39 696 aaPredicted RBP11.9□□□□□ -0.5
RTF1-202ENST00000462276 KATNAL1Q9BW62 490 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 XPNPEP3Q9NQH7 507 aa11.9□□□□□ -0.5
RTF1-202ENST00000462276 PVALEFA0A1B0GWK0 134 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 H3BRB1 525 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 GAS2O43903 313 aaKnown RBP11.89□□□□□ -0.51
RTF1-202ENST00000462276 ZNF862O60290 1169 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 CABYRO75952 493 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 OATP04181 439 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 LGALS2P05162 132 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 RARRES1P49788 294 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 SLC12A3P55017 1021 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 PRKCEQ02156 737 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 GNASQ5JWF2 1037 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 NT5DC1Q5TFE4 455 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 RNF180Q86T96 592 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 ARRDC4Q8NCT1 418 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 SPATA20Q8TB22 786 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 PCYT2Q99447 389 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 PLIN2Q99541 437 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 C16orf70Q9BSU1 422 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 TSEN34Q9BSV6 310 aaKnown RBP11.89□□□□□ -0.51
RTF1-202ENST00000462276 SEZ6LQ9BYH1 1024 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 TRIM9Q9C026 710 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 BHMT2Q9H2M3 363 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 TUT1Q9H6E5 874 aaKnown RBP11.89□□□□□ -0.51
RTF1-202ENST00000462276 RMND1Q9NWS8 449 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 TMEM63CQ9P1W3 806 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 KIAA1468Q9P260 1216 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 ZNFX1Q9P2E3 1918 aaKnown RBP11.89□□□□□ -0.51
RTF1-202ENST00000462276 DOCK3Q8IZD9 2030 aa11.89□□□□□ -0.51
RTF1-202ENST00000462276 LCTP09848 1927 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 TCHHQ07283 1943 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 E9PMD0 336 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 ADCY6O43306 1168 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 DGAT1O75907 488 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 STBD1O95210 358 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 F2P00734 622 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 C6orf222P0C671 652 aaPredicted RBP11.88□□□□□ -0.51
RTF1-202ENST00000462276 CYP11B2P19099 503 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 GUCY2CP25092 1073 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 CCND3P30281 292 aaPredicted RBP11.88□□□□□ -0.51
RTF1-202ENST00000462276 RFC5P40937 340 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 PSMC6P62333 389 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 TRIM32Q13049 653 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 MCM6Q14566 821 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 UGCGQ16739 394 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 XKR9Q5GH70 373 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 ZNF484Q5JVG2 852 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 TMEM63BQ5T3F8 832 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 GJC2Q5T442 439 aaPredicted RBP11.88□□□□□ -0.51
RTF1-202ENST00000462276 UTP14CQ5TAP6 766 aaKnown RBP11.88□□□□□ -0.51
RTF1-202ENST00000462276 ANO5Q75V66 913 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 KCNK18Q7Z418 384 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 TRIML1Q8N9V2 468 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 MCPH1Q8NEM0 835 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 KLHDC9Q8NEP7 349 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 PIGOQ8TEQ8 1089 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 SMARCE1Q969G3 411 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 ARMC5Q96C12 935 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 CEP170P1Q96L14 293 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 C17orf75Q9HAS0 396 aa11.88□□□□□ -0.51
RTF1-202ENST00000462276 CYP26B1Q9NR63 512 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms