RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 SECISBP2LQ93073 1101 aaKnown RBP6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 SLC6A16Q9GZN6 736 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 NAPBQ9H115 298 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 SH2D4AQ9H788 454 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 ARPP21Q9UBL0 812 aaPredicted RBP6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 RAD50Q92878 1312 aa6.94□□□□□ -1.3
SMARCC1-204ENST00000462198 USP24Q9UPU5 2620 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 LINC01565O15544 149 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 EFCAB14O75071 495 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 EYA4O95677 639 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 SLC3A2P08195 630 aaKnown RBP6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 CYP2D6P10635 497 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 HSPD1P10809 573 aaKnown RBP6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 MCCP23508 829 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 GTF2F1P35269 517 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 PURAQ00577 322 aaKnown RBP6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 ADAM15Q13444 863 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 FAM83BQ5T0W9 1011 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 PDXDC2PQ6P474 469 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 NFRKBQ6P4R8 1299 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 CTR9Q6PD62 1173 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 BRICD5Q6PL45 260 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 EEPD1Q7L9B9 569 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 TRIM50Q86XT4 487 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 TMEM192Q8IY95 271 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 FAM177A1Q8N128 213 aaPredicted RBP6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 TMEM105Q8N8V8 129 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 KCNG4Q8TDN1 519 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 GPKOWQ92917 476 aaPredicted RBP eCLIP6.93□□□□□ -1.35e-6■□□□□ 9.6
SMARCC1-204ENST00000462198 RPGRIP1Q96KN7 1286 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 ESYT1Q9BSJ8 1104 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 MTG1Q9BT17 334 aaPredicted RBP6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 ATP13A2Q9NQ11 1180 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 RRAGDQ9NQL2 400 aaPredicted RBP6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 NOD1Q9Y239 953 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 NLRC5Q86WI3 1866 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 TANC1Q9C0D5 1861 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 MICAL3Q7RTP6 2002 aa6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 SETXQ7Z333 2677 aaKnown RBP6.93□□□□□ -1.3
SMARCC1-204ENST00000462198 ATG2AQ2TAZ0 1938 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 FRYLO94915 3013 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 CYP2D7A0A087X1C5 515 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 ASB14A6NK59 587 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 RBAK-RBAKDNI3L0D1 243 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 ATP2A1O14983 1001 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 SGSM2O43147 1006 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 ICMTO60725 284 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 NBNO60934 754 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 ZBED4O75132 1171 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 TBX10O75333 385 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 RECKO95980 971 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 CXCL10P02778 98 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 EEF2P13639 858 aaKnown RBP6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 SELPP16109 830 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 JUNDP17535 347 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 ICAM3P32942 547 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 ATP1A2P50993 1020 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 HTRA4P83105 476 aaPredicted RBP6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 ICA1Q05084 483 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 PTPN11Q06124 597 aaPredicted RBP6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 PPARAQ07869 468 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 ECM1Q16610 540 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 PTGISQ16647 500 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 SBK1Q52WX2 424 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 C12orf60Q5U649 245 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 STK11IPQ8N1F8 1099 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 CCDC155Q8N6L0 562 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 FAM133AQ8N9E0 248 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 PRPF38AQ8NAV1 312 aaKnown RBP6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 ZSCAN1Q8NBB4 408 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 CHST13Q8NET6 341 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 AFAP1L1Q8TED9 768 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 SREK1Q8WXA9 508 aaKnown RBP6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 MSLNLQ96KJ4 702 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 ASB16Q96NS5 453 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 SLF1Q9BQI6 1058 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 SENP2Q9HC62 589 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 RAVER2Q9HCJ3 691 aaKnown RBP6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 EPB41L4AQ9HCS5 686 aaPredicted RBP6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 DNAAF2Q9NVR5 837 aaKnown RBP6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 DLL3Q9NYJ7 618 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 FBXO40Q9UH90 709 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 KIAA1024Q9UPX6 916 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 CTDP1Q9Y5B0 961 aaPredicted RBP6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 PCDHGC5Q9Y5F6 944 aa6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 DDX49Q9Y6V7 483 aaKnown RBP6.92□□□□□ -1.3
SMARCC1-204ENST00000462198 SCN10AQ9Y5Y9 1956 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 FAM208BQ5VWN6 2430 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 GRM6O15303 877 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 FOXP2O15409 715 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 PARNO95453 639 aaKnown RBP6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 FGAP02671 866 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 AMHP03971 560 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 AKR1B1P15121 316 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 NDUFV1P49821 464 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 CHMP4BP1P59074 171 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 PTK2Q05397 1052 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 ACAP1Q15027 740 aa6.91□□□□□ -1.3
SMARCC1-204ENST00000462198 ALX1Q15699 326 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms