RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 NLRP2Q9NX02 1062 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 SEC63Q9UGP8 760 aaKnown RBP9.99□□□□□ -0.81
LINC01140-201ENST00000461990 CROTQ9UKG9 612 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 A0A087X0B3 334 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 RBAK-RBAKDNI3L0D1 243 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 LYNP07948 512 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 KIF11P52732 1056 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 ITGA9Q13797 1035 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 SLC44A4Q53GD3 710 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 MEI1Q5TIA1 1274 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 ZNF658Q5TYW1 1059 aaPredicted RBP9.99□□□□□ -0.81
LINC01140-201ENST00000461990 TMEM110Q86TL2 294 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 SLC17A8Q8NDX2 589 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 LPIN2Q92539 896 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 RNF25Q96BH1 459 aaPredicted RBP9.99□□□□□ -0.81
LINC01140-201ENST00000461990 AGBL1Q96MI9 1066 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 PSMB7Q99436 277 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 NAP1L3Q99457 506 aaPredicted RBP9.99□□□□□ -0.81
LINC01140-201ENST00000461990 CSRNP2Q9H175 543 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 DHX36Q9H2U1 1008 aaKnown RBP9.99□□□□□ -0.81
LINC01140-201ENST00000461990 GPHNQ9NQX3 736 aaPredicted RBP9.99□□□□□ -0.81
LINC01140-201ENST00000461990 PTTG2Q9NZH5 202 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 NDUFA13Q9P0J0 144 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 SALL4Q9UJQ4 1053 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 CHMP2BQ9UQN3 213 aa9.99□□□□□ -0.81
LINC01140-201ENST00000461990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 HTR3EA5X5Y0 456 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 CCDC169A6NNP5 214 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 POTEJP0CG39 1038 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 FLT3P36888 993 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 ACADVLP49748 655 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 SPIDRQ14159 915 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 SYDE2Q5VT97 1194 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 KRT26Q7Z3Y9 468 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 IQCF2Q8IXL9 164 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 GFM2Q969S9 779 aaKnown RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 MTMR8Q96EF0 704 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 AIFM3Q96NN9 605 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 ERGIC2Q96RQ1 377 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 DDX23Q9BUQ8 820 aaKnown RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 FOXP1Q9H334 677 aaPredicted RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 KIAA1522Q9P206 1035 aaPredicted RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 DBF4Q9UBU7 674 aaPredicted RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 PI4KAP2A4QPH2 592 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 TRIM43BA6NCK2 446 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 IPO5O00410 1097 aaKnown RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 FOXO3O43524 673 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 SUPT3HO75486 399 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 FUT4P22083 530 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 RASSF7Q02833 373 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 AP1B1Q10567 949 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 TRIM29Q14134 588 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 GIT2Q14161 759 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 BTNL9Q6UXG8 535 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 MARK2Q7KZI7 788 aaKnown RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 CCDC65Q8IXS2 484 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 NME8Q8N427 588 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 PI4KAP1Q8N8J0 262 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 ACTRT1Q8TDG2 376 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 LRRC8CQ8TDW0 803 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 SCG3Q8WXD2 468 aaKnown RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 EPB41L4BQ9H329 900 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 LRRC4CQ9HCJ2 640 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 ARHGAP20Q9P2F6 1191 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 SUCLA2Q9P2R7 463 aaPredicted RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 CTDP1Q9Y5B0 961 aaPredicted RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 ALKQ9UM73 1620 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 UBR1Q8IWV7 1749 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 A0A0G2JLW4 131 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 SMIM31A0A1B0GVY4 71 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 VAV1P15498 845 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 TRIM21P19474 475 aaKnown RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 CCNFP41002 786 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 ANTXR2P58335 489 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 RTP1P59025 263 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 DHX9Q08211 1270 aaKnown RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 TTLL12Q14166 644 aaPredicted RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 INF2Q27J81 1249 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 ASTE1Q2TB18 679 aaPredicted RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 SNX30Q5VWJ9 437 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 RRAGBQ5VZM2 374 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 SCUBE1Q8IWY4 988 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 NELFCDQ8IXH7 590 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 LSM14AQ8ND56 463 aaKnown RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 ABHD8Q96I13 439 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 SNX27Q96L92 541 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 NEUROD6Q96NK8 337 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 PPP1R12CQ9BZL4 782 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 STMN4Q9H169 189 aaPredicted RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 TIMMDC1Q9NPL8 285 aa9.98□□□□□ -0.81
LINC01140-201ENST00000461990 DBNLQ9UJU6 430 aaKnown RBP9.98□□□□□ -0.81
LINC01140-201ENST00000461990 MYH6P13533 1939 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 PLEKHG1Q9ULL1 1385 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 TMEM110-MUSTN1A8MSY1 372 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 TRPC1P48995 793 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 GEMIN4P57678 1058 aaKnown RBP9.97□□□□□ -0.81
LINC01140-201ENST00000461990 NTRK3Q16288 839 aa9.97□□□□□ -0.81
LINC01140-201ENST00000461990 ZC2HC1CQ53FD0 456 aaPredicted RBP9.97□□□□□ -0.81
LINC01140-201ENST00000461990 C6orf118Q5T5N4 469 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms