RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 GPR20Q99678 358 aa9.98□□□□□ -0.81
HDAC9-220ENST00000461409 EHMT1Q9H9B1 1298 aa9.98□□□□□ -0.81
HDAC9-220ENST00000461409 CERS4Q9HA82 394 aa9.98□□□□□ -0.81
HDAC9-220ENST00000461409 RTEL1Q9NZ71 1219 aa9.98□□□□□ -0.81
HDAC9-220ENST00000461409 BAZ2BQ9UIF8 2168 aaKnown RBP9.98□□□□□ -0.81
HDAC9-220ENST00000461409 EPOPA6NHQ4 379 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 SPDYE3A6NKU9 549 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 RFXAPO00287 272 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 ARHGEF15O94989 841 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 AMHP03971 560 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 MMP16P51512 607 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 MBTPS1Q14703 1052 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 NECTIN1Q15223 517 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 BMP2KLQ5H9B9 411 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 TMTC3Q6ZXV5 915 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 ZNF598Q86UK7 904 aaKnown RBP9.97□□□□□ -0.81
HDAC9-220ENST00000461409 FANCBQ8NB91 859 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 SPIRE2Q8WWL2 714 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 SEPT8Q92599 483 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 TGS1Q96RS0 853 aaKnown RBP9.97□□□□□ -0.81
HDAC9-220ENST00000461409 UHRF1Q96T88 793 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-220ENST00000461409 USB1Q9BQ65 265 aaKnown RBP9.97□□□□□ -0.81
HDAC9-220ENST00000461409 RNPEPQ9H4A4 650 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 SLC24A3Q9HC58 644 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 LMCD1Q9NZU5 365 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 COG5Q9UP83 839 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 INSL6Q9Y581 213 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 NCOR1O75376 2440 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 TET1Q8NFU7 2136 aa9.97□□□□□ -0.81
HDAC9-220ENST00000461409 TRIP12Q14669 1992 aaPredicted RBP9.96□□□□□ -0.81
HDAC9-220ENST00000461409 LCHNA4D1U4 455 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 TREHO43280 583 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 RXRAP19793 462 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 ARHGAP4P98171 946 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 SP4Q02446 784 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 GRB10Q13322 594 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 MTMR1Q13613 665 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 PKDCCQ504Y2 493 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 PLEKHG4Q58EX7 1191 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 UTP14CQ5TAP6 766 aaKnown RBP9.96□□□□□ -0.82
HDAC9-220ENST00000461409 TAF2Q6P1X5 1199 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 CENPQQ7L2Z9 268 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-220ENST00000461409 HEATR3Q7Z4Q2 680 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 TMCO2Q7Z6W1 182 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-220ENST00000461409 SGMS1Q86VZ5 419 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 MICU3Q86XE3 530 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 TRIM50Q86XT4 487 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 DBF4BQ8NFT6 615 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 LMBR1Q8WVP7 490 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 APBB2Q92870 758 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 BCAS3Q9H6U6 928 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 SETD4Q9NVD3 440 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 RBM28Q9NW13 759 aaKnown RBP9.96□□□□□ -0.82
HDAC9-220ENST00000461409 NRCAMQ92823 1304 aa9.96□□□□□ -0.82
HDAC9-220ENST00000461409 MYH7BA7E2Y1 1941 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 PRRC2BQ5JSZ5 2229 aaKnown RBP9.95□□□□□ -0.82
HDAC9-220ENST00000461409 LINC01553A4QN01 128 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 MAFGO15525 162 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 RPLP2P05387 115 aaKnown RBP9.95□□□□□ -0.82
HDAC9-220ENST00000461409 CTSHP09668 335 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 KCNA2P16389 499 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 ITGB5P18084 799 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 TCF7P36402 384 aaPredicted RBP9.95□□□□□ -0.82
HDAC9-220ENST00000461409 ERVK-21P61565 698 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 TCTN1Q2MV58 587 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 APOA5Q6Q788 366 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 RSPH3Q86UC2 560 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 MYOCDQ8IZQ8 938 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 CMTR1Q8N1G2 835 aaKnown RBP9.95□□□□□ -0.82
HDAC9-220ENST00000461409 CCDC82Q8N4S0 544 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 SEPT1Q8WYJ6 367 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 LRRC2Q9BYS8 371 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 ERAP1Q9NZ08 941 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 PCDHGC3Q9UN70 934 aa9.95□□□□□ -0.82
HDAC9-220ENST00000461409 hCG_1642624A0A1W2PR95 340 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 hCG_1984214I3L0E3 225 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 ZBTB43O43298 467 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 LPXNO60711 386 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 DXOO77932 396 aaKnown RBP9.94□□□□□ -0.82
HDAC9-220ENST00000461409 FOSP01100 380 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-220ENST00000461409 HMGB1P09429 215 aaKnown RBP9.94□□□□□ -0.82
HDAC9-220ENST00000461409 BMP1P13497 986 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 ADAM17P78536 824 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 HTRA4P83105 476 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-220ENST00000461409 TFF2Q03403 129 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 PPFIA1Q13136 1202 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 KRT32Q14532 448 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 UBE2SQ16763 222 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 RTN1Q16799 776 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 FAM26DQ5JW98 314 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 KRT40Q6A162 431 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 FAM117BQ6P1L5 589 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.94□□□□□ -0.82
HDAC9-220ENST00000461409 DHX32Q7L7V1 743 aaKnown RBP9.94□□□□□ -0.82
HDAC9-220ENST00000461409 RPAINQ86UA6 219 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 RAB11FIP4Q86YS3 637 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 ZNF713Q8N859 430 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-220ENST00000461409 GDPD5Q8WTR4 605 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 GLG1Q92896 1179 aa9.94□□□□□ -0.82
HDAC9-220ENST00000461409 TNPO1Q92973 898 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms