RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 CCHCR1Q8TD31 782 aa13.57□□□□□ -0.24
AGRN-203ENST00000461111 PAIP2Q9BPZ3 127 aaKnown RBP13.57□□□□□ -0.24
AGRN-203ENST00000461111 DDX23Q9BUQ8 820 aaKnown RBP13.57□□□□□ -0.24
AGRN-203ENST00000461111 CNOT10Q9H9A5 744 aaKnown RBP13.57□□□□□ -0.24
AGRN-203ENST00000461111 LRRD1A4D1F6 860 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 CFAP73A6NFT4 308 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 PJA2O43164 708 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 OR52Z1P0C646 297 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 ZNF211Q13398 564 aaPredicted RBP13.56□□□□□ -0.24
AGRN-203ENST00000461111 UBAP2Q5T6F2 1119 aaKnown RBP13.56□□□□□ -0.24
AGRN-203ENST00000461111 HGSNATQ68CP4 663 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 TBCKQ8TEA7 893 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 NAF1Q96HR8 494 aaKnown RBP13.56□□□□□ -0.24
AGRN-203ENST00000461111 TSG101Q99816 390 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 DCP1AQ9NPI6 582 aaPredicted RBP13.56□□□□□ -0.24
AGRN-203ENST00000461111 CORO1CQ9ULV4 474 aaPredicted RBP13.56□□□□□ -0.24
AGRN-203ENST00000461111 FGGP02679 453 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 MSH2P43246 934 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 SLC29A2Q14542 456 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 CNNM4Q6P4Q7 775 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 HOOK3Q86VS8 718 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 CELF1Q92879 486 aaKnown RBP13.56□□□□□ -0.24
AGRN-203ENST00000461111 NSRP1Q9H0G5 558 aaKnown RBP13.56□□□□□ -0.24
AGRN-203ENST00000461111 KBTBD4Q9NVX7 518 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 SLC12A4Q9UP95 1085 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 NR2E1Q9Y466 385 aa13.56□□□□□ -0.24
AGRN-203ENST00000461111 A0A1B0GVG6 124 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 SERPING1P05155 500 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 ACTN1P12814 892 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 RPS6KA3P51812 740 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 ASIC2Q16515 512 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 FIGNQ5HY92 759 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 CLEC10AQ8IUN9 316 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 EPS8L3Q8TE67 593 aaKnown RBP13.55□□□□□ -0.24
AGRN-203ENST00000461111 TEKT4Q8WW24 435 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 ZNF317Q96PQ6 595 aaPredicted RBP13.55□□□□□ -0.24
AGRN-203ENST00000461111 ZMYND12Q9H0C1 365 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 SRRM3A6NNA2 597 aaPredicted RBP13.55□□□□□ -0.24
AGRN-203ENST00000461111 RARAP10276 462 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 FGFR2P21802 821 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 HNRNPH3P31942 346 aaKnown RBP13.55□□□□□ -0.24
AGRN-203ENST00000461111 RAB27AP51159 221 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 RAD23BP54727 409 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 NONOQ15233 471 aaKnown RBP eCLIP13.55□□□□□ -0.24
AGRN-203ENST00000461111 ERFEQ4G0M1 354 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 HERC4Q5GLZ8 1057 aaPredicted RBP13.55□□□□□ -0.24
AGRN-203ENST00000461111 ZSCAN29Q8IWY8 852 aaPredicted RBP13.55□□□□□ -0.24
AGRN-203ENST00000461111 ETNK1Q9HBU6 452 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 ZMYND8Q9ULU4 1186 aaPredicted RBP13.55□□□□□ -0.24
AGRN-203ENST00000461111 STXBP3O00186 592 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 PYGLP06737 847 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 FGFR4P22455 802 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 KCNMA1Q12791 1236 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 IKQ13123 557 aaPredicted RBP13.55□□□□□ -0.24
AGRN-203ENST00000461111 BLMHQ13867 455 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 ZNF268Q14587 947 aaPredicted RBP13.55□□□□□ -0.24
AGRN-203ENST00000461111 PLA2G12BQ9BX93 195 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 BMP2KQ9NSY1 1161 aaPredicted RBP13.55□□□□□ -0.24
AGRN-203ENST00000461111 ADAM22Q9P0K1 906 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 ARPP21Q9UBL0 812 aaPredicted RBP13.55□□□□□ -0.24
AGRN-203ENST00000461111 BCS1LQ9Y276 419 aa13.55□□□□□ -0.24
AGRN-203ENST00000461111 MAP3K13O43283 966 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 ABCB4P21439 1286 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 HIBADHP31937 336 aaKnown RBP13.54□□□□□ -0.24
AGRN-203ENST00000461111 TUBP50607 506 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 ICA1Q05084 483 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 ARL6IP4Q66PJ3 421 aaKnown RBP13.54□□□□□ -0.24
AGRN-203ENST00000461111 C4orf32Q8N8J7 132 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 DNAJC17Q9NVM6 304 aaKnown RBP13.54□□□□□ -0.24
AGRN-203ENST00000461111 NKX1-2Q9UD57 310 aaPredicted RBP13.54□□□□□ -0.24
AGRN-203ENST00000461111 ATP6V0A2Q9Y487 856 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 C4AP0C0L4 1744 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 C4BP0C0L5 1744 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 TMEM110-MUSTN1A8MSY1 372 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 DDAH1O94760 285 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 COPS2P61201 443 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 TRAF1Q13077 416 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 USP4Q13107 963 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 PPP2R5BQ15173 497 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 SLC18A3Q16572 532 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 ASTE1Q2TB18 679 aaPredicted RBP13.54□□□□□ -0.24
AGRN-203ENST00000461111 C3orf67Q6ZVT6 689 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 C1orf131Q8NDD1 294 aaKnown RBP13.54□□□□□ -0.24
AGRN-203ENST00000461111 PIGSQ96S52 555 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.54□□□□□ -0.243e-11■■■■■ 29.2
AGRN-203ENST00000461111 PCDHA6Q9UN73 950 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 PCDHA8Q9Y5H6 950 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 GOLGA6L10A0A0M3HER8 536 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 CRKLP46109 303 aaKnown RBP13.54□□□□□ -0.24
AGRN-203ENST00000461111 CALCRLQ16602 461 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 TMEM266Q2M3C6 531 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 KRT79Q5XKE5 535 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 LRRC47Q8N1G4 583 aaKnown RBP13.54□□□□□ -0.24
AGRN-203ENST00000461111 IFT74Q96LB3 600 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 DLGAP2Q9P1A6 1054 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 TOPAZ1Q8N9V7 1692 aa13.54□□□□□ -0.24
AGRN-203ENST00000461111 PMS2P54278 862 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 TMEM154Q6P9G4 183 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 SLC51AQ86UW1 340 aa13.53□□□□□ -0.24
AGRN-203ENST00000461111 RPUSD2Q8IZ73 545 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms