RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 ITGB3BPQ13352 177 aaPredicted RBP13.22□□□□□ -0.29
GCOM1-203ENST00000460962 PEX26Q7Z412 305 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 ARFGAP2Q8N6H7 521 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 LRRC57Q8N9N7 239 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 CALR3Q96L12 384 aaKnown RBP13.22□□□□□ -0.29
GCOM1-203ENST00000460962 DDX4Q9NQI0 724 aaKnown RBP13.22□□□□□ -0.29
GCOM1-203ENST00000460962 MEFVO15553 781 aaPredicted RBP13.22□□□□□ -0.29
GCOM1-203ENST00000460962 SART1O43290 800 aaKnown RBP13.22□□□□□ -0.29
GCOM1-203ENST00000460962 CALUO43852 315 aaPredicted RBP13.22□□□□□ -0.29
GCOM1-203ENST00000460962 LRIG3Q6UXM1 1119 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 SFR1Q86XK3 245 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 ERMNQ8TAM6 284 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 TBC1D16Q8TBP0 767 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 ZNF473Q8WTR7 871 aaKnown RBP13.22□□□□□ -0.29
GCOM1-203ENST00000460962 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.22□□□□□ -0.29
GCOM1-203ENST00000460962 TMBIM4Q9HC24 238 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 POLLQ9UGP5 575 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 DNM3Q9UQ16 869 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 NOC2LQ9Y3T9 749 aaKnown RBP13.22□□□□□ -0.29
GCOM1-203ENST00000460962 PCDHA1Q9Y5I3 950 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 ARFGEF1Q9Y6D6 1849 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 MEIS1O00470 390 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 KRIT1O00522 736 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 CTNNA1P35221 906 aaKnown RBP13.22□□□□□ -0.29
GCOM1-203ENST00000460962 GIT2Q14161 759 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 QRICH1Q2TAL8 776 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 FBXW10Q5XX13 1052 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 DDX42Q86XP3 938 aaKnown RBP eCLIP13.22□□□□□ -0.29
GCOM1-203ENST00000460962 CATSPER3Q86XQ3 398 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 SUGP1Q8IWZ8 645 aaKnown RBP13.22□□□□□ -0.29
GCOM1-203ENST00000460962 METTL13Q8N6R0 699 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 TPCN2Q8NHX9 752 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 IPO4Q8TEX9 1081 aaKnown RBP13.22□□□□□ -0.29
GCOM1-203ENST00000460962 LMBR1Q8WVP7 490 aa13.22□□□□□ -0.29
GCOM1-203ENST00000460962 DDX47Q9H0S4 455 aaKnown RBP13.22□□□□□ -0.29
GCOM1-203ENST00000460962 H0YHG0 523 aa13.21□□□□□ -0.29
GCOM1-203ENST00000460962 ECHS1P30084 290 aa13.21□□□□□ -0.29
GCOM1-203ENST00000460962 SHMT1P34896 483 aa13.21□□□□□ -0.29
GCOM1-203ENST00000460962 PRKCIP41743 596 aa13.21□□□□□ -0.29
GCOM1-203ENST00000460962 SEC24CP53992 1094 aa13.21□□□□□ -0.29
GCOM1-203ENST00000460962 PRR16Q569H4 304 aa13.21□□□□□ -0.29
GCOM1-203ENST00000460962 NLRP14Q86W24 1093 aa13.21□□□□□ -0.29
GCOM1-203ENST00000460962 RBM46Q8TBY0 533 aaKnown RBP13.21□□□□□ -0.29
GCOM1-203ENST00000460962 RBM17Q96I25 401 aaKnown RBP13.21□□□□□ -0.29
GCOM1-203ENST00000460962 CCT8L2Q96SF2 557 aa13.21□□□□□ -0.29
GCOM1-203ENST00000460962 REEP2Q9BRK0 252 aa13.21□□□□□ -0.29
GCOM1-203ENST00000460962 CAPN7Q9Y6W3 813 aa13.21□□□□□ -0.29
GCOM1-203ENST00000460962 E7EVH7 732 aa13.21□□□□□ -0.3
GCOM1-203ENST00000460962 PDXKO00764 312 aa13.21□□□□□ -0.3
GCOM1-203ENST00000460962 AKAP3O75969 853 aa13.21□□□□□ -0.3
GCOM1-203ENST00000460962 H2AFZP0C0S5 128 aa13.21□□□□□ -0.3
GCOM1-203ENST00000460962 PSMC6P62333 389 aa13.21□□□□□ -0.3
GCOM1-203ENST00000460962 DPY19L2P1Q6NXN4 242 aa13.21□□□□□ -0.3
GCOM1-203ENST00000460962 H2AFVQ71UI9 128 aa13.21□□□□□ -0.3
GCOM1-203ENST00000460962 MYCBPAPQ8TBZ2 947 aa13.21□□□□□ -0.3
GCOM1-203ENST00000460962 MYO3BQ8WXR4 1341 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 CCDC188H7C350 402 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 ANXA13P27216 316 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 DAAM2Q86T65 1068 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 PROCA1Q8NCQ7 364 aaPredicted RBP13.2□□□□□ -0.3
GCOM1-203ENST00000460962 OR2W6PQ8NHA6 318 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 METTL14Q9HCE5 456 aaKnown RBP13.2□□□□□ -0.3
GCOM1-203ENST00000460962 GCNT4Q9P109 453 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 FOCADQ5VW36 1801 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 CYP3A7-CYP3A51PA0A087WV96 503 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 HLA-DOAP06340 250 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 CYP3A7P24462 503 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 RPL13P26373 211 aaKnown RBP13.2□□□□□ -0.3
GCOM1-203ENST00000460962 ARHGAP4P98171 946 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 EPHA7Q15375 998 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 CRY2Q49AN0 593 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 SYCE1Q8N0S2 351 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 SYT2Q8N9I0 419 aaPredicted RBP13.2□□□□□ -0.3
GCOM1-203ENST00000460962 UBLCP1Q8WVY7 318 aaPredicted RBP13.2□□□□□ -0.3
GCOM1-203ENST00000460962 MXD3Q9BW11 206 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 USP40Q9NVE5 1235 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 FAM107AO95990 144 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 NR3C1P04150 777 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 HOXD13P35453 343 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 USP8P40818 1118 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 HDLBPQ00341 1268 aaKnown RBP13.2□□□□□ -0.3
GCOM1-203ENST00000460962 UAP1Q16222 522 aaPredicted RBP13.2□□□□□ -0.3
GCOM1-203ENST00000460962 RUFY4Q6ZNE9 571 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 FAM196AQ6ZSG2 479 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 EPM2AIP1Q7L775 607 aaPredicted RBP13.2□□□□□ -0.3
GCOM1-203ENST00000460962 CERKQ8TCT0 537 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 PAGR1Q9BTK6 254 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 PPANQ9NQ55 473 aaKnown RBP13.2□□□□□ -0.3
GCOM1-203ENST00000460962 TYW1Q9NV66 732 aaKnown RBP13.2□□□□□ -0.3
GCOM1-203ENST00000460962 BCCIPQ9P287 314 aaKnown RBP eCLIP13.2□□□□□ -0.3
GCOM1-203ENST00000460962 AMACRQ9UHK6 382 aa13.2□□□□□ -0.3
GCOM1-203ENST00000460962 BBOX1O75936 387 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 GUCY2CP25092 1073 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 RPA1P27694 616 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 SPIRE1Q08AE8 756 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 MTMR3Q13615 1198 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 ODF2Q5BJF6 829 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 RNF187Q5TA31 235 aaPredicted RBP13.19□□□□□ -0.3
GCOM1-203ENST00000460962 MOXD1Q6UVY6 613 aa13.19□□□□□ -0.3
GCOM1-203ENST00000460962 PLCD3Q8N3E9 789 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms