RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 SSRP1Q08945 709 aaKnown RBP16.75■□□□□ 0.27
NCK1-202ENST00000460960 TRAF1Q13077 416 aa16.75■□□□□ 0.27
NCK1-202ENST00000460960 METTL7BQ6UX53 244 aa16.75■□□□□ 0.27
NCK1-202ENST00000460960 HFE2Q6ZVN8 426 aa16.75■□□□□ 0.27
NCK1-202ENST00000460960 SAMD3Q8N6K7 520 aa16.75■□□□□ 0.27
NCK1-202ENST00000460960 LMBR1Q8WVP7 490 aa16.75■□□□□ 0.27
NCK1-202ENST00000460960 TMX3Q96JJ7 454 aa16.75■□□□□ 0.27
NCK1-202ENST00000460960 POP1Q99575 1024 aaKnown RBP16.75■□□□□ 0.27
NCK1-202ENST00000460960 GPR20Q99678 358 aa16.75■□□□□ 0.27
NCK1-202ENST00000460960 BARHL2Q9NY43 387 aa16.75■□□□□ 0.27
NCK1-202ENST00000460960 VPS54Q9P1Q0 977 aa16.75■□□□□ 0.27
NCK1-202ENST00000460960 ADGRA3Q8IWK6 1321 aa16.74■□□□□ 0.27
NCK1-202ENST00000460960 C19orf67A6NJJ6 358 aa16.74■□□□□ 0.27
NCK1-202ENST00000460960 GTF2F1P35269 517 aaKnown RBP eCLIP16.74■□□□□ 0.27
NCK1-202ENST00000460960 BMPR1AP36894 532 aa16.74■□□□□ 0.27
NCK1-202ENST00000460960 LTBRP36941 435 aa16.74■□□□□ 0.27
NCK1-202ENST00000460960 NAPAP54920 295 aa16.74■□□□□ 0.27
NCK1-202ENST00000460960 DLX2Q07687 328 aaPredicted RBP16.74■□□□□ 0.27
NCK1-202ENST00000460960 HYAL1Q12794 435 aa16.74■□□□□ 0.27
NCK1-202ENST00000460960 BTG3Q14201 252 aaPredicted RBP16.74■□□□□ 0.27
NCK1-202ENST00000460960 LMAN2LQ9H0V9 348 aa16.74■□□□□ 0.27
NCK1-202ENST00000460960 RWDD3Q9Y3V2 267 aa16.74■□□□□ 0.27
NCK1-202ENST00000460960 COL4A6Q14031 1691 aa16.74■□□□□ 0.27
NCK1-202ENST00000460960 FIBPO43427 364 aa16.73■□□□□ 0.27
NCK1-202ENST00000460960 MBTPS2O43462 519 aa16.73■□□□□ 0.27
NCK1-202ENST00000460960 RB1P06400 928 aa16.73■□□□□ 0.27
NCK1-202ENST00000460960 NDUFV1P49821 464 aa16.73■□□□□ 0.27
NCK1-202ENST00000460960 FOSBP53539 338 aa16.73■□□□□ 0.27
NCK1-202ENST00000460960 MRPS9P82933 396 aaKnown RBP16.73■□□□□ 0.27
NCK1-202ENST00000460960 COL19A1Q14993 1142 aa16.73■□□□□ 0.27
NCK1-202ENST00000460960 SMAD2Q15796 467 aaKnown RBP16.73■□□□□ 0.27
NCK1-202ENST00000460960 MFSD14AQ96MC6 490 aa16.73■□□□□ 0.27
NCK1-202ENST00000460960 TMEM260Q9NX78 707 aa16.73■□□□□ 0.27
NCK1-202ENST00000460960 ORC3Q9UBD5 711 aaPredicted RBP16.73■□□□□ 0.27
NCK1-202ENST00000460960 TELO2Q9Y4R8 837 aa16.73■□□□□ 0.27
NCK1-202ENST00000460960 STK36Q9NRP7 1315 aa16.72■□□□□ 0.27
NCK1-202ENST00000460960 SPATA31C2B4DYI2 1134 aa16.72■□□□□ 0.27
NCK1-202ENST00000460960 LINC01565O15544 149 aa16.72■□□□□ 0.27
NCK1-202ENST00000460960 CHRNA1P02708 482 aa16.72■□□□□ 0.27
NCK1-202ENST00000460960 AKAP17AQ02040 695 aaKnown RBP16.72■□□□□ 0.27
NCK1-202ENST00000460960 SEMA3FQ13275 785 aa16.72■□□□□ 0.27
NCK1-202ENST00000460960 SMAD4Q13485 552 aaKnown RBP16.72■□□□□ 0.27
NCK1-202ENST00000460960 NPY5RQ15761 445 aa16.72■□□□□ 0.27
NCK1-202ENST00000460960 FAM26DQ5JW98 314 aa16.72■□□□□ 0.27
NCK1-202ENST00000460960 RUFY4Q6ZNE9 571 aa16.72■□□□□ 0.27
NCK1-202ENST00000460960 RSPH3Q86UC2 560 aa16.72■□□□□ 0.27
NCK1-202ENST00000460960 PGBD1Q96JS3 809 aa16.72■□□□□ 0.27
NCK1-202ENST00000460960 ZSCAN31Q96LW9 406 aaPredicted RBP16.72■□□□□ 0.27
NCK1-202ENST00000460960 INPP4AQ96PE3 977 aaPredicted RBP16.72■□□□□ 0.27
NCK1-202ENST00000460960 KCNH6Q9H252 994 aa16.72■□□□□ 0.27
NCK1-202ENST00000460960 PSTPIP2Q9H939 334 aa16.72■□□□□ 0.27
NCK1-202ENST00000460960 ALG13Q9NP73 1137 aaKnown RBP16.72■□□□□ 0.27
NCK1-202ENST00000460960 SH2B1Q9NRF2 756 aaPredicted RBP16.72■□□□□ 0.27
NCK1-202ENST00000460960 CD207Q9UJ71 328 aa16.72■□□□□ 0.27
NCK1-202ENST00000460960 SMCO2A6NFE2 343 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 C5orf67F2Z3F1 127 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 TBX10O75333 385 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 STAM2O75886 525 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 DEXIO95424 95 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 IBSPP21815 317 aaPredicted RBP16.71■□□□□ 0.27
NCK1-202ENST00000460960 MARK3P27448 753 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 ICAM3P32942 547 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 PPFIA1Q13136 1202 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 CTC1Q2NKJ3 1217 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 CPLX2Q6PUV4 134 aaKnown RBP16.71■□□□□ 0.27
NCK1-202ENST00000460960 RNF135Q8IUD6 432 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 TRIM22Q8IYM9 498 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 SMARCC2Q8TAQ2 1214 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 RASGRP4Q8TDF6 673 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 RIC8AQ9NPQ8 531 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 KCNJ14Q9UNX9 436 aa16.71■□□□□ 0.27
NCK1-202ENST00000460960 NRCAMQ92823 1304 aa16.7■□□□□ 0.26
NCK1-202ENST00000460960 ZNF318Q5VUA4 2279 aa16.7■□□□□ 0.26
NCK1-202ENST00000460960 PIK3CDO00329 1044 aa16.7■□□□□ 0.26
NCK1-202ENST00000460960 CDKL5O76039 1030 aa16.7■□□□□ 0.26
NCK1-202ENST00000460960 ADCY7P51828 1080 aa16.7■□□□□ 0.26
NCK1-202ENST00000460960 IGBP1P78318 339 aa16.7■□□□□ 0.26
NCK1-202ENST00000460960 LPIN1Q14693 890 aa16.7■□□□□ 0.26
NCK1-202ENST00000460960 PPP1R18Q6NYC8 613 aa16.7■□□□□ 0.26
NCK1-202ENST00000460960 TAF2Q6P1X5 1199 aa16.7■□□□□ 0.26
NCK1-202ENST00000460960 DNAJB3Q8WWF6 145 aa16.7■□□□□ 0.26
NCK1-202ENST00000460960 CUL5Q93034 780 aa16.7■□□□□ 0.26
NCK1-202ENST00000460960 PPP2R3CQ969Q6 453 aa16.7■□□□□ 0.26
NCK1-202ENST00000460960 ZMYND12Q9H0C1 365 aa16.7■□□□□ 0.26
NCK1-202ENST00000460960 PKD2L1Q9P0L9 805 aa16.7■□□□□ 0.26
NCK1-202ENST00000460960 hCG_1984214I3L0E3 225 aa16.69■□□□□ 0.26
NCK1-202ENST00000460960 ENPP3O14638 875 aa16.69■□□□□ 0.26
NCK1-202ENST00000460960 MMP1P03956 469 aa16.69■□□□□ 0.26
NCK1-202ENST00000460960 TCF7P36402 384 aaPredicted RBP16.69■□□□□ 0.26
NCK1-202ENST00000460960 CLK2P49760 499 aaKnown RBP16.69■□□□□ 0.26
NCK1-202ENST00000460960 ADAM17P78536 824 aa16.69■□□□□ 0.26
NCK1-202ENST00000460960 GRIK4Q16099 956 aa16.69■□□□□ 0.26
NCK1-202ENST00000460960 PAN2Q504Q3 1202 aaKnown RBP16.69■□□□□ 0.26
NCK1-202ENST00000460960 HERC4Q5GLZ8 1057 aaPredicted RBP16.69■□□□□ 0.26
NCK1-202ENST00000460960 NLRX1Q86UT6 975 aa16.69■□□□□ 0.26
NCK1-202ENST00000460960 ZNF713Q8N859 430 aaPredicted RBP16.69■□□□□ 0.26
NCK1-202ENST00000460960 GLG1Q92896 1179 aa16.69■□□□□ 0.26
NCK1-202ENST00000460960 FAM49AQ9H0Q0 323 aaPredicted RBP16.69■□□□□ 0.26
NCK1-202ENST00000460960 TUBE1Q9UJT0 475 aa16.69■□□□□ 0.26
NCK1-202ENST00000460960 CDY2AQ9Y6F7 541 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms