RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 DBHP09172 617 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 MSL3P1P0C860 447 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 PF4V1P10720 104 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 GRK2P25098 689 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 GRK3P35626 688 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 KLF1Q13351 362 aaPredicted RBP3.83□□□□□ -1.8
HPS3-203ENST00000460822 PCBP2Q15366 365 aaKnown RBP eCLIP3.83□□□□□ -1.8
HPS3-203ENST00000460822 INF2Q27J81 1249 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 INAVAQ3KP66 663 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 MBLAC2Q68D91 279 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 DGKHQ86XP1 1220 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 LZTR1Q8N653 840 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 NLGN2Q8NFZ4 835 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 SLC5A5Q92911 643 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 SLC39A13Q96H72 371 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 SLC13A1Q9BZW2 595 aa3.83□□□□□ -1.8
HPS3-203ENST00000460822 PPARGC1AQ9UBK2 798 aaKnown RBP3.83□□□□□ -1.8
HPS3-203ENST00000460822 ZC3H12DA2A288 527 aaKnown RBP3.82□□□□□ -1.8
HPS3-203ENST00000460822 FZD9O00144 591 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 GSTA4O15217 222 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 CEBPAP49715 358 aaPredicted RBP3.82□□□□□ -1.8
HPS3-203ENST00000460822 NCKAP1LP55160 1127 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 CTSWP56202 376 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 ZNF200P98182 395 aaPredicted RBP3.82□□□□□ -1.8
HPS3-203ENST00000460822 FAPQ12884 760 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 OS9Q13438 667 aaPredicted RBP3.82□□□□□ -1.8
HPS3-203ENST00000460822 CREB3L3Q68CJ9 461 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 IQCEQ6IPM2 695 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 CXorf57Q6NSI4 855 aaKnown RBP3.82□□□□□ -1.8
HPS3-203ENST00000460822 PNMA8AQ86V59 439 aaPredicted RBP3.82□□□□□ -1.8
HPS3-203ENST00000460822 CPNE8Q86YQ8 564 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 CMIPQ8IY22 773 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 C2orf69Q8N8R5 385 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 PANK1Q8TE04 598 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 FBXW5Q969U6 566 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 TIFAQ96CG3 184 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 PARD6AQ9NPB6 346 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 OXSMQ9NWU1 459 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 FBXL7Q9UJT9 491 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 CBLCQ9ULV8 474 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 WASHC2AQ641Q2 1341 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 FAM47E-STBD1D6RA91 191 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 KRT37O76014 449 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 PDE6AP16499 860 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 RECQLP46063 649 aaPredicted RBP3.82□□□□□ -1.8
HPS3-203ENST00000460822 SESN3P58005 492 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 BROXQ5VW32 411 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 PGM2L1Q6PCE3 622 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 CPA6Q8N4T0 437 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 SAMD3Q8N6K7 520 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 EFHBQ8N7U6 833 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 C1orf162Q8NEQ5 155 aaPredicted RBP3.82□□□□□ -1.8
HPS3-203ENST00000460822 ALG3Q92685 438 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 CHAMP1Q96JM3 812 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 PWWP2AQ96N64 755 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 MMP19Q99542 508 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 KCNJ15Q99712 375 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 CATSPERZQ9NTU4 200 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 OBP2AQ9NY56 170 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 ZBTB21Q9ULJ3 1066 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 RWDD3Q9Y3V2 267 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 PCDHA5Q9Y5H7 936 aa3.82□□□□□ -1.8
HPS3-203ENST00000460822 MYO1BO43795 1136 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 CREB3O43889 395 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 LDHAP00338 332 aaKnown RBP3.81□□□□□ -1.8
HPS3-203ENST00000460822 NCAM1P13591 858 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 PRR5P85299 388 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 ODF1Q14990 250 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 RGL3Q3MIN7 710 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 TMED8Q6PL24 325 aaPredicted RBP3.81□□□□□ -1.8
HPS3-203ENST00000460822 TSHZ1Q6ZSZ6 1077 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 FAM129CQ86XR2 697 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 IGDCC3Q8IVU1 814 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 TMEFF1Q8IYR6 380 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 DACT3Q96B18 629 aaPredicted RBP3.81□□□□□ -1.8
HPS3-203ENST00000460822 PEX11GQ96HA9 241 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 FAXDC2Q96IV6 333 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 LRGUKQ96M69 825 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 TCF7L1Q9HCS4 588 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 ANKRD6Q9Y2G4 727 aa3.81□□□□□ -1.8
HPS3-203ENST00000460822 TGM5O43548 720 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 CFBP00751 764 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 U2AF1L5P0DN76 240 aaPredicted RBP3.8□□□□□ -1.8
HPS3-203ENST00000460822 HOXA5P20719 270 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 SCAND1P57086 179 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 U2AF1Q01081 240 aaKnown RBP eCLIP3.8□□□□□ -1.8
HPS3-203ENST00000460822 CRY1Q16526 586 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 VMACQ2NL98 169 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 MINDY4Q4G0A6 757 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 ERICH6BQ5W0A0 696 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 C16orf59Q7L2K0 433 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 EPM2AIP1Q7L775 607 aaPredicted RBP3.8□□□□□ -1.8
HPS3-203ENST00000460822 SP8Q8IXZ3 490 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 MARCH10Q8NA82 808 aaPredicted RBP3.8□□□□□ -1.8
HPS3-203ENST00000460822 NETO2Q8NC67 525 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 SVIPQ8NHG7 77 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 BOCQ9BWV1 1114 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 CDIP1Q9H305 208 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 PRDM11Q9NQV5 511 aa3.8□□□□□ -1.8
HPS3-203ENST00000460822 MKS1Q9NXB0 559 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms