RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 PFASO15067 1338 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ABCB11O95342 1321 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SYNGAP1Q96PV0 1343 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 A0A087WUV0 522 aaPredicted RBP6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 USP27XA6NNY8 438 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 GOLGA8KD6RF30 607 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RNF40O75150 1001 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TM4SF1P30408 202 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 STARD3Q14849 445 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 LGSNQ5TDP6 509 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PPP4R3CPQ6ZMV5 832 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CATSPER4Q7RTX7 472 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SPDYE1Q8NFV5 336 aaPredicted RBP6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 DCAF4Q8WV16 495 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 HAUS8Q9BT25 410 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 EMSYQ7Z589 1322 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RPTORQ8N122 1335 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 VWA3AA6NCI4 1184 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RRN3P2A6NIE6 340 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ELAVL2Q12926 359 aaKnown RBP6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PPIGQ13427 754 aaKnown RBP eCLIP6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 GPIHBP1Q8IV16 184 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SPATA5Q8NB90 893 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 OTUD5Q96G74 571 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 FOPNLQ96NB1 174 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TMEM39AQ9NV64 488 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 GMEB2Q9UKD1 530 aa6.77□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CCDC160A6NGH7 325 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MED7O43513 233 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PDE8BO95263 885 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 DPEP1P16444 411 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PSMC4P43686 418 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 STAT2P52630 851 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MTA1Q13330 715 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 STRIP1Q5VSL9 837 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CNNM4Q6P4Q7 775 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 IQUBQ8NA54 791 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 OR6J1Q8NGC5 347 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KLHDC4Q8TBB5 520 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TGFBRAP1Q8WUH2 860 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KCNF1Q9H3M0 494 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ZCCHC17Q9NP64 241 aaKnown RBP6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CNOT7Q9UIV1 285 aaKnown RBP6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 AFG3L2Q9Y4W6 797 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KCPQ6ZWJ8 1503 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CACNA1FO60840 1977 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ENC1O14682 589 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 HGSO14964 777 aaPredicted RBP6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KLHL41O60662 606 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 BCRP11274 1271 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KRT5P13647 590 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MAGEA9P43362 315 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 FBXW4P57775 412 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 HADHQ16836 314 aaKnown RBP6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CYB5D1Q6P9G0 228 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 HHIPL2Q6UWX4 724 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MICALL2Q8IY33 904 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 NDEL1Q9GZM8 345 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CDC23Q9UJX2 597 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 USTQ9Y2C2 406 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ATP11BQ9Y2G3 1177 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CLRN2A0PK11 232 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MBD4O95243 580 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 LARGE1O95461 756 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 GNA14O95837 355 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CSF1RP07333 972 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ARPP19P56211 112 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 COG7P83436 770 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CCNG2Q16589 344 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 XKR9Q5GH70 373 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ANKS3Q6ZW76 656 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CROCCP2Q86T23 111 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ANKRD7Q92527 254 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 IL17RAQ96F46 866 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 YME1L1Q96TA2 773 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 EIF3CQ99613 913 aaKnown RBP6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 NOC4LQ9BVI4 516 aaKnown RBP6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MRPL9Q9BYD2 267 aaKnown RBP6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ACAD9Q9H845 621 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ABI2Q9NYB9 513 aaPredicted RBP6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SERPINA10Q9UK55 444 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ADAM21Q9UKJ8 722 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 JAG2Q9Y219 1238 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KDM3BQ7LBC6 1761 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RGPD5Q99666 1765 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 GH1P01241 217 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SCP2P22307 547 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 GUCY2FP51841 1108 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 IGBP1P78318 339 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CENPCQ03188 943 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 DPCR1Q3MIW9 517 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CCDC144BQ3MJ40 725 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RABL6Q3YEC7 729 aaPredicted RBP6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SLFN12LQ6IEE8 588 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CCDC25Q86WR0 208 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 LMNTD2Q8IXW0 634 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 FBXO22Q8NEZ5 403 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 BEST2Q8NFU1 509 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TTLL11Q8NHH1 800 aa6.76□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SEC62Q99442 399 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms