RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 A0A1W2PQ27 194 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 A0A1W2PQ64 194 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 A0A1W2PQD8 194 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 POTEB3A0JP26 581 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 RRN3P2A6NIE6 340 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 HBP1O60381 514 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 LGR5O75473 907 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 LYPLA2O95372 231 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 CCNE2O96020 404 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 LGALS2P05162 132 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 ASGR1P07306 291 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 HOXB3P14651 431 aaPredicted RBP12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 CMA1P23946 247 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 AMPD3Q01432 767 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 PTPN11Q06124 597 aaPredicted RBP12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 KCNA10Q16322 511 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 UTP14CQ5TAP6 766 aaKnown RBP12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 POTEBQ6S5H4 581 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 CABP7Q86V35 215 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 TPH2Q8IWU9 490 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 C7orf31Q8N865 590 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 IQUBQ8NA54 791 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 COPS5Q92905 334 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 HSD17B14Q9BPX1 270 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 EIF2AK1Q9BQI3 630 aaKnown RBP12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 STARD7Q9NQZ5 370 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 GABBR1Q9UBS5 961 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 KCNG1Q9UIX4 513 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 MAFBQ9Y5Q3 323 aaPredicted RBP12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 MGAMO43451 1857 aa12.33□□□□□ -0.44
SMNDC1-203ENST00000460483 GSTTP1A0A1W2PQM5 241 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 DDX11L8A8MPP1 907 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 WNT7AO00755 349 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 F2P00734 622 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 ACLYP53396 1101 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 PURAQ00577 322 aaKnown RBP12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 SPIRE1Q08AE8 756 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 RRAGBQ5VZM2 374 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 KANK3Q6NY19 840 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 NECAB2Q7Z6G3 386 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 TNS4Q8IZW8 715 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 RETREG2Q8NC44 543 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 ATP8B4Q8TF62 1192 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 MRPS27Q92552 414 aaKnown RBP12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 LXNQ9BS40 222 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 FTOQ9C0B1 505 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 CSRNP2Q9H175 543 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 MAGEF1Q9HAY2 307 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 ANKEF1Q9NU02 776 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 KCND2Q9NZV8 630 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 STK17AQ9UEE5 414 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 PCDHA7Q9UN72 937 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 PHF24Q9UPV7 400 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 NRCAMQ92823 1304 aa12.32□□□□□ -0.44
SMNDC1-203ENST00000460483 A0A0U1RQG5 324 aaPredicted RBP12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 MAGEB2O15479 319 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 GAS2O43903 313 aaKnown RBP12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 SORBS3O60504 671 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 SLITRK3O94933 977 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 OATP04181 439 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 TMOD1P28289 359 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 YWHABP31946 246 aaKnown RBP12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 DNM2P50570 870 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 UBE2HP62256 183 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 CDC42EP1Q00587 391 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 ZRSR1Q15695 479 aaKnown RBP12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 ZNF484Q5JVG2 852 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 GJC2Q5T442 439 aaPredicted RBP12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 NFRKBQ6P4R8 1299 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 CATSPER3Q86XQ3 398 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 CEP57L1Q8IYX8 460 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 TMEM87AQ8NBN3 555 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 SLC7A3Q8WY07 619 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 NOD1Q9Y239 953 aa12.31□□□□□ -0.44
SMNDC1-203ENST00000460483 COL1A2P08123 1366 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 TLR3O15455 904 aaKnown RBP12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 ADCY6O43306 1168 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 STAT6P42226 847 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 PSEN2P49810 448 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 BEX3Q00994 111 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 CYP4A11Q02928 519 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 MFSD10Q14728 455 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 KIAA0753Q2KHM9 967 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 HYIQ5T013 277 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 RESP18Q5W5W9 173 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 CXCL17Q6UXB2 119 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 RSPH3Q86UC2 560 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 BANK1Q8NDB2 785 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 SYMPKQ92797 1274 aaKnown RBP12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 DYDC2Q96IM9 177 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 UIMC1Q96RL1 719 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 C16orf70Q9BSU1 422 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 TIPINQ9BVW5 301 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 DBR1Q9UK59 544 aaKnown RBP12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 KCNH3Q9ULD8 1083 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 KIAA1024Q9UPX6 916 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 IGSF9BQ9UPX0 1349 aa12.3□□□□□ -0.44
SMNDC1-203ENST00000460483 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 C17orf102A2RUQ5 167 aa12.29□□□□□ -0.44
SMNDC1-203ENST00000460483 ARHGEF35A5YM69 484 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms