RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 POTEIP0CG38 1075 aa15.98■□□□□ 0.15
PTPRU-205ENST00000460170 PDIA5Q14554 519 aa15.98■□□□□ 0.15
PTPRU-205ENST00000460170 SLMAPQ14BN4 828 aa15.98■□□□□ 0.15
PTPRU-205ENST00000460170 POTEGQ6S5H5 508 aa15.98■□□□□ 0.15
PTPRU-205ENST00000460170 POTEEQ6S8J3 1075 aa15.98■□□□□ 0.15
PTPRU-205ENST00000460170 SDCCAG8Q86SQ7 713 aaPredicted RBP15.98■□□□□ 0.15
PTPRU-205ENST00000460170 PRELPP51888 382 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 PEX3P56589 373 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 IRX2Q9BZI1 471 aaPredicted RBP15.97■□□□□ 0.15
PTPRU-205ENST00000460170 HDAC6Q9UBN7 1215 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 NTSR2O95665 410 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 CLNS1AP54105 237 aaKnown RBP15.97■□□□□ 0.15
PTPRU-205ENST00000460170 MTERF2Q49AM1 385 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 TAB3Q8N5C8 712 aaPredicted RBP15.97■□□□□ 0.15
PTPRU-205ENST00000460170 EDEM3Q9BZQ6 932 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 POC1B-GALNT4F8VUJ3 575 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 CTNND1O60716 968 aaKnown RBP15.97■□□□□ 0.15
PTPRU-205ENST00000460170 SUN1O94901 812 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 USP11P51784 963 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 MAP7D3Q8IWC1 876 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 RILPQ96NA2 401 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 OSBPL9Q96SU4 736 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 ZNF341Q9BYN7 854 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 INO80B-WBP1J3KQ70 363 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 EIF3BP55884 814 aaKnown RBP15.97■□□□□ 0.15
PTPRU-205ENST00000460170 GEN1Q17RS7 908 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 SEPT14Q6ZU15 432 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 SULF1Q8IWU6 871 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 INO80BQ9C086 356 aaPredicted RBP15.97■□□□□ 0.15
PTPRU-205ENST00000460170 ANAPC5Q9UJX4 755 aa15.97■□□□□ 0.15
PTPRU-205ENST00000460170 NOVA2Q9UNW9 492 aaKnown RBP15.97■□□□□ 0.15
PTPRU-205ENST00000460170 PSAPP07602 524 aa15.96■□□□□ 0.15
PTPRU-205ENST00000460170 CA8P35219 290 aa15.96■□□□□ 0.15
PTPRU-205ENST00000460170 HMGB1P1B2RPK0 211 aaPredicted RBP15.96■□□□□ 0.15
PTPRU-205ENST00000460170 M0QZ92 97 aa15.96■□□□□ 0.15
PTPRU-205ENST00000460170 KCTD2Q14681 263 aa15.96■□□□□ 0.15
PTPRU-205ENST00000460170 TRIM50Q86XT4 487 aa15.96■□□□□ 0.15
PTPRU-205ENST00000460170 EFCAB13Q8IY85 973 aa15.96■□□□□ 0.15
PTPRU-205ENST00000460170 CNOT10Q9H9A5 744 aaKnown RBP15.96■□□□□ 0.15
PTPRU-205ENST00000460170 IGBP1P78318 339 aa15.96■□□□□ 0.15
PTPRU-205ENST00000460170 HACE1Q8IYU2 909 aa15.96■□□□□ 0.15
PTPRU-205ENST00000460170 TC2NQ8N9U0 490 aa15.96■□□□□ 0.15
PTPRU-205ENST00000460170 POLD4Q9HCU8 107 aa15.96■□□□□ 0.15
PTPRU-205ENST00000460170 ADGRB2O60241 1585 aa15.96■□□□□ 0.15
PTPRU-205ENST00000460170 ITIH6Q6UXX5 1313 aa15.96■□□□□ 0.15
PTPRU-205ENST00000460170 SGK1O00141 431 aa15.96■□□□□ 0.14
PTPRU-205ENST00000460170 TTBK2Q6IQ55 1244 aa15.96■□□□□ 0.14
PTPRU-205ENST00000460170 NFRKBQ6P4R8 1299 aa15.96■□□□□ 0.14
PTPRU-205ENST00000460170 LRRC8CQ8TDW0 803 aa15.96■□□□□ 0.14
PTPRU-205ENST00000460170 DEPDC5O75140 1603 aa15.96■□□□□ 0.14
PTPRU-205ENST00000460170 H7C0C1 242 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 ATP5OP48047 213 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 HNRNPH2P55795 449 aaKnown RBP15.95■□□□□ 0.14
PTPRU-205ENST00000460170 IL9RQ01113 521 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 RTKN2Q8IZC4 609 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 XXYLT1Q8NBI6 393 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 SMC1BQ8NDV3 1235 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 ANKRD36BP1Q96IX9 119 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 DIS3Q9Y2L1 958 aaKnown RBP15.95■□□□□ 0.14
PTPRU-205ENST00000460170 ZNF233A6NK53 670 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 RHOBTB3O94955 611 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 FXR1P51114 621 aaKnown RBP eCLIP15.95■□□□□ 0.14
PTPRU-205ENST00000460170 CYP4F22Q6NT55 531 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 PADI6Q6TGC4 694 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 ARMC9Q7Z3E5 817 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 DYDC2Q96IM9 177 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 CHP1Q99653 195 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.95■□□□□ 0.14
PTPRU-205ENST00000460170 TMEM131LA2VDJ0 1609 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 STAT3P40763 770 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 RWDD2BP57060 319 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 DNAJC24Q6P3W2 148 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 ELOA2Q8IYF1 753 aaPredicted RBP15.95■□□□□ 0.14
PTPRU-205ENST00000460170 TBC1D31Q96DN5 1066 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 RAB3IPQ96QF0 476 aaPredicted RBP15.95■□□□□ 0.14
PTPRU-205ENST00000460170 MTMR4Q9NYA4 1195 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 SUGT1Q9Y2Z0 365 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 TTLL3Q9Y4R7 772 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 MIF4GDA9UHW6 222 aaKnown RBP15.95■□□□□ 0.14
PTPRU-205ENST00000460170 MRPS9P82933 396 aaKnown RBP15.95■□□□□ 0.14
PTPRU-205ENST00000460170 TFAMQ00059 246 aaKnown RBP15.95■□□□□ 0.14
PTPRU-205ENST00000460170 PDXDC2PQ6P474 469 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 FBXO33Q7Z6M2 555 aa15.95■□□□□ 0.14
PTPRU-205ENST00000460170 A0A087WUV0 522 aaPredicted RBP15.94■□□□□ 0.14
PTPRU-205ENST00000460170 RASGRP2Q7LDG7 609 aa15.94■□□□□ 0.14
PTPRU-205ENST00000460170 SP8Q8IXZ3 490 aa15.94■□□□□ 0.14
PTPRU-205ENST00000460170 SEL1LQ9UBV2 794 aa15.94■□□□□ 0.14
PTPRU-205ENST00000460170 GOLGA8SH3BPF8 625 aa15.94■□□□□ 0.14
PTPRU-205ENST00000460170 RASGRF2O14827 1237 aa15.94■□□□□ 0.14
PTPRU-205ENST00000460170 ATP1A1P05023 1023 aaKnown RBP15.94■□□□□ 0.14
PTPRU-205ENST00000460170 SLCO1A2P46721 670 aa15.94■□□□□ 0.14
PTPRU-205ENST00000460170 TTLL6Q8N841 843 aa15.94■□□□□ 0.14
PTPRU-205ENST00000460170 DCPSQ96C86 337 aaKnown RBP15.94■□□□□ 0.14
PTPRU-205ENST00000460170 ZMYND12Q9H0C1 365 aa15.94■□□□□ 0.14
PTPRU-205ENST00000460170 ZCCHC17Q9NP64 241 aaKnown RBP15.94■□□□□ 0.14
PTPRU-205ENST00000460170 SPATA31D1Q6ZQQ2 1576 aa15.94■□□□□ 0.14
PTPRU-205ENST00000460170 ECE2O60344 883 aa15.94■□□□□ 0.14
PTPRU-205ENST00000460170 CLTAP09496 248 aa15.94■□□□□ 0.14
PTPRU-205ENST00000460170 JAK3P52333 1124 aa15.94■□□□□ 0.14
PTPRU-205ENST00000460170 YWHAGP61981 247 aaKnown RBP eCLIP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms