RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 INTS4Q96HW7 963 aaKnown RBP24.5■■□□□ 1.51
SSNA1-202ENST00000459860 CTAGE1Q96RT6 745 aa24.5■■□□□ 1.51
SSNA1-202ENST00000459860 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.5■■□□□ 1.51
SSNA1-202ENST00000459860 WNT8AQ9H1J5 351 aa24.5■■□□□ 1.51
SSNA1-202ENST00000459860 KIF28PB7ZC32 967 aa24.49■■□□□ 1.51
SSNA1-202ENST00000459860 RFC2P35250 354 aa24.49■■□□□ 1.51
SSNA1-202ENST00000459860 IGBP1P78318 339 aa24.49■■□□□ 1.51
SSNA1-202ENST00000459860 RASIP1Q5U651 963 aa24.49■■□□□ 1.51
SSNA1-202ENST00000459860 ATP8B4Q8TF62 1192 aa24.49■■□□□ 1.51
SSNA1-202ENST00000459860 FAM167AQ96KS9 214 aa24.49■■□□□ 1.51
SSNA1-202ENST00000459860 TUBE1Q9UJT0 475 aa24.49■■□□□ 1.51
SSNA1-202ENST00000459860 MAFBQ9Y5Q3 323 aaPredicted RBP24.49■■□□□ 1.51
SSNA1-202ENST00000459860 IGSF9BQ9UPX0 1349 aa24.49■■□□□ 1.51
SSNA1-202ENST00000459860 PRUNE2Q8WUY3 3088 aa24.48■■□□□ 1.51
SSNA1-202ENST00000459860 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.48■■□□□ 1.51
SSNA1-202ENST00000459860 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.48■■□□□ 1.51
SSNA1-202ENST00000459860 HBP1O60381 514 aa24.48■■□□□ 1.51
SSNA1-202ENST00000459860 INSRRP14616 1297 aa24.48■■□□□ 1.51
SSNA1-202ENST00000459860 SELPP16109 830 aa24.48■■□□□ 1.51
SSNA1-202ENST00000459860 MCM7P33993 719 aa24.48■■□□□ 1.51
SSNA1-202ENST00000459860 RBL2Q08999 1139 aa24.48■■□□□ 1.51
SSNA1-202ENST00000459860 PPP2R5CQ13362 524 aa24.48■■□□□ 1.51
SSNA1-202ENST00000459860 HIC1Q14526 733 aa24.48■■□□□ 1.51
SSNA1-202ENST00000459860 TTC38Q5R3I4 469 aa24.48■■□□□ 1.51
SSNA1-202ENST00000459860 PSRC1Q6PGN9 363 aaPredicted RBP24.48■■□□□ 1.51
SSNA1-202ENST00000459860 RPUSD2Q8IZ73 545 aaKnown RBP24.48■■□□□ 1.51
SSNA1-202ENST00000459860 DHX38Q92620 1227 aaKnown RBP24.48■■□□□ 1.51
SSNA1-202ENST00000459860 HAS1Q92839 578 aa24.48■■□□□ 1.51
SSNA1-202ENST00000459860 SCLYQ96I15 445 aa24.48■■□□□ 1.51
SSNA1-202ENST00000459860 IL23AQ9NPF7 189 aa24.48■■□□□ 1.51
SSNA1-202ENST00000459860 SCN5AQ14524 2016 aa24.47■■□□□ 1.51
SSNA1-202ENST00000459860 COL1A2P08123 1366 aa24.47■■□□□ 1.51
SSNA1-202ENST00000459860 PARNO95453 639 aaKnown RBP24.47■■□□□ 1.51
SSNA1-202ENST00000459860 HSP90AA1P07900 732 aaKnown RBP24.47■■□□□ 1.51
SSNA1-202ENST00000459860 CKBP12277 381 aa24.47■■□□□ 1.51
SSNA1-202ENST00000459860 GRIN2CQ14957 1233 aa24.47■■□□□ 1.51
SSNA1-202ENST00000459860 TMEM240Q5SV17 173 aa24.47■■□□□ 1.51
SSNA1-202ENST00000459860 TAF2Q6P1X5 1199 aa24.47■■□□□ 1.51
SSNA1-202ENST00000459860 LRRC8DQ7L1W4 858 aa24.47■■□□□ 1.51
SSNA1-202ENST00000459860 BBXQ8WY36 941 aaPredicted RBP24.47■■□□□ 1.51
SSNA1-202ENST00000459860 VAV3Q9UKW4 847 aa24.47■■□□□ 1.51
SSNA1-202ENST00000459860 CAND2O75155 1236 aa24.46■■□□□ 1.51
SSNA1-202ENST00000459860 RPLP2P05387 115 aaKnown RBP24.46■■□□□ 1.51
SSNA1-202ENST00000459860 PFKMP08237 780 aa24.46■■□□□ 1.51
SSNA1-202ENST00000459860 IQCF3P0C7M6 154 aa24.46■■□□□ 1.51
SSNA1-202ENST00000459860 FOSL2P15408 326 aa24.46■■□□□ 1.51
SSNA1-202ENST00000459860 DNAJB2P25686 324 aa24.46■■□□□ 1.51
SSNA1-202ENST00000459860 THPOP40225 353 aa24.46■■□□□ 1.51
SSNA1-202ENST00000459860 ADAM17P78536 824 aa24.46■■□□□ 1.51
SSNA1-202ENST00000459860 ZNF484Q5JVG2 852 aa24.46■■□□□ 1.51
SSNA1-202ENST00000459860 NCAPH2Q6IBW4 605 aa24.46■■□□□ 1.51
SSNA1-202ENST00000459860 B3GNT9Q6UX72 402 aa24.46■■□□□ 1.51
SSNA1-202ENST00000459860 RSPH3Q86UC2 560 aa24.46■■□□□ 1.51
SSNA1-202ENST00000459860 PCDHA12Q9UN75 941 aa24.46■■□□□ 1.51
SSNA1-202ENST00000459860 CEP131Q9UPN4 1083 aa24.46■■□□□ 1.51
SSNA1-202ENST00000459860 WNT7AO00755 349 aa24.45■■□□□ 1.5
SSNA1-202ENST00000459860 DKC1O60832 514 aaKnown RBP eCLIP24.45■■□□□ 1.5
SSNA1-202ENST00000459860 ZNF174Q15697 407 aa24.45■■□□□ 1.5
SSNA1-202ENST00000459860 MTIF3Q9H2K0 278 aaKnown RBP24.45■■□□□ 1.5
SSNA1-202ENST00000459860 NRBP2Q9NSY0 501 aa24.45■■□□□ 1.5
SSNA1-202ENST00000459860 VPS37CA5D8V6 355 aaPredicted RBP24.44■■□□□ 1.5
SSNA1-202ENST00000459860 OATP04181 439 aa24.44■■□□□ 1.5
SSNA1-202ENST00000459860 TXKP42681 527 aa24.44■■□□□ 1.5
SSNA1-202ENST00000459860 PRKCEQ02156 737 aa24.44■■□□□ 1.5
SSNA1-202ENST00000459860 TRIM71Q2Q1W2 868 aaKnown RBP24.44■■□□□ 1.5
SSNA1-202ENST00000459860 RILPL1Q5EBL4 403 aa24.44■■□□□ 1.5
SSNA1-202ENST00000459860 TRMT1LQ7Z2T5 733 aaKnown RBP24.44■■□□□ 1.5
SSNA1-202ENST00000459860 WNT8BQ93098 351 aa24.44■■□□□ 1.5
SSNA1-202ENST00000459860 TTC12Q9H892 705 aaPredicted RBP24.44■■□□□ 1.5
SSNA1-202ENST00000459860 FOXD4L1Q9NU39 408 aa24.44■■□□□ 1.5
SSNA1-202ENST00000459860 MBLAC1A4D2B0 266 aaPredicted RBP24.43■■□□□ 1.5
SSNA1-202ENST00000459860 OR52Z1P0C646 297 aa24.43■■□□□ 1.5
SSNA1-202ENST00000459860 ACRP10323 421 aa24.43■■□□□ 1.5
SSNA1-202ENST00000459860 ATP4AP20648 1035 aa24.43■■□□□ 1.5
SSNA1-202ENST00000459860 ZNF618Q5T7W0 954 aa24.43■■□□□ 1.5
SSNA1-202ENST00000459860 DEFB128Q7Z7B8 93 aa24.43■■□□□ 1.5
SSNA1-202ENST00000459860 TRAPPC12Q8WVT3 735 aa24.43■■□□□ 1.5
SSNA1-202ENST00000459860 ZNF576Q9H609 170 aa24.43■■□□□ 1.5
SSNA1-202ENST00000459860 RSPH10B2B2RC85 870 aa24.42■■□□□ 1.5
SSNA1-202ENST00000459860 RSPH10BP0C881 870 aa24.42■■□□□ 1.5
SSNA1-202ENST00000459860 ACTN1P12814 892 aa24.42■■□□□ 1.5
SSNA1-202ENST00000459860 PSMC5P62195 406 aa24.42■■□□□ 1.5
SSNA1-202ENST00000459860 EPHA7Q15375 998 aa24.42■■□□□ 1.5
SSNA1-202ENST00000459860 UGCGQ16739 394 aa24.42■■□□□ 1.5
SSNA1-202ENST00000459860 TMEM266Q2M3C6 531 aa24.42■■□□□ 1.5
SSNA1-202ENST00000459860 MARCH8Q5T0T0 291 aa24.42■■□□□ 1.5
SSNA1-202ENST00000459860 ZNF365Q70YC5 407 aa24.42■■□□□ 1.5
SSNA1-202ENST00000459860 BANK1Q8NDB2 785 aa24.42■■□□□ 1.5
SSNA1-202ENST00000459860 TIFAQ96CG3 184 aa24.42■■□□□ 1.5
SSNA1-202ENST00000459860 MTMR9Q96QG7 549 aa24.42■■□□□ 1.5
SSNA1-202ENST00000459860 FTOQ9C0B1 505 aaKnown RBP eCLIP24.42■■□□□ 1.5
SSNA1-202ENST00000459860 GRXCR1A8MXD5 290 aa24.41■■□□□ 1.5
SSNA1-202ENST00000459860 EML1O00423 815 aa24.41■■□□□ 1.5
SSNA1-202ENST00000459860 ZNF862O60290 1169 aa24.41■■□□□ 1.5
SSNA1-202ENST00000459860 FGBP02675 491 aa24.41■■□□□ 1.5
SSNA1-202ENST00000459860 P4HBP07237 508 aaKnown RBP24.41■■□□□ 1.5
SSNA1-202ENST00000459860 CTSHP09668 335 aa24.41■■□□□ 1.5
SSNA1-202ENST00000459860 PBX2P40425 430 aa24.41■■□□□ 1.5
SSNA1-202ENST00000459860 QARSP47897 775 aaKnown RBP24.41■■□□□ 1.5
SSNA1-202ENST00000459860 XKR3Q5GH77 459 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms