RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 ENAHQ8N8S7 591 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-214ENST00000458640 NKX2-3Q8TAU0 364 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 NCSTNQ92542 709 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 IFT43Q96FT9 208 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 CHMP6Q96FZ7 201 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 PURBQ96QR8 312 aaKnown RBP12.37□□□□□ -0.43
DDX39B-214ENST00000458640 SLF1Q9BQI6 1058 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 LRRC1Q9BTT6 524 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 YIPF2Q9BWQ6 316 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 LUC7LQ9NQ29 371 aaKnown RBP12.37□□□□□ -0.43
DDX39B-214ENST00000458640 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.37□□□□□ -0.43
DDX39B-214ENST00000458640 GALNT8Q9NY28 637 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 LRRC10BA6NIK2 292 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 CYP2D6P10635 497 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 HSPA9P38646 679 aaKnown RBP12.37□□□□□ -0.43
DDX39B-214ENST00000458640 MDM2Q00987 491 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-214ENST00000458640 MPP3Q13368 585 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 PNOCQ13519 176 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 AOC3Q16853 763 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 TSNAXIP1Q2TAA8 658 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 USH1GQ495M9 461 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 CCDC122Q5T0U0 273 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 CDKAL1Q5VV42 579 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 CREG2Q8IUH2 290 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 KIAA0825Q8IV33 1275 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 LRRC43Q8N309 656 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 SPATA4Q8NEY3 305 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 FBF1Q8TES7 1133 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 NOC3LQ8WTT2 800 aaKnown RBP12.37□□□□□ -0.43
DDX39B-214ENST00000458640 MRIQ9BWK5 157 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 VPS33BQ9H267 617 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 PCDH18Q9HCL0 1135 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 SPATA7Q9P0W8 599 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 DDX25Q9UHL0 483 aaKnown RBP12.37□□□□□ -0.43
DDX39B-214ENST00000458640 DMGDHQ9UI17 866 aaKnown RBP12.37□□□□□ -0.43
DDX39B-214ENST00000458640 SNX12Q9UMY4 172 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 DAAM1Q9Y4D1 1078 aa12.37□□□□□ -0.43
DDX39B-214ENST00000458640 SCN9AQ15858 1988 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 MYO3BQ8WXR4 1341 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 USO1O60763 962 aaKnown RBP12.36□□□□□ -0.43
DDX39B-214ENST00000458640 FDPSP14324 419 aaKnown RBP12.36□□□□□ -0.43
DDX39B-214ENST00000458640 DPEP1P16444 411 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 IFNAR1P17181 557 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 RXRAP19793 462 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 PAFAH1B1P43034 410 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 SSRP1Q08945 709 aaKnown RBP12.36□□□□□ -0.43
DDX39B-214ENST00000458640 TRIM29Q14134 588 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 PIGWQ7Z7B1 504 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 ERICH1Q86X53 443 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 SYCP3Q8IZU3 236 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 ZNF444Q8N0Y2 327 aaPredicted RBP12.36□□□□□ -0.43
DDX39B-214ENST00000458640 SDR16C5Q8N3Y7 309 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 FANCBQ8NB91 859 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 NDNQ99608 321 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 MYL10Q9BUA6 226 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 UBE2OQ9C0C9 1292 aaKnown RBP12.36□□□□□ -0.43
DDX39B-214ENST00000458640 MIS12Q9H081 205 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 MAN1B1Q9UKM7 699 aa12.36□□□□□ -0.43
DDX39B-214ENST00000458640 PAIP2BQ9ULR5 123 aaKnown RBP12.36□□□□□ -0.43
DDX39B-214ENST00000458640 PALM3A6NDB9 673 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-214ENST00000458640 TPD52L2O43399 206 aaKnown RBP12.35□□□□□ -0.43
DDX39B-214ENST00000458640 TSPY3P0CV98 308 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 TSPY8P0CW00 308 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 SP100P23497 879 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-214ENST00000458640 CDC27P30260 824 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 SCNN1BP51168 640 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 C2orf54Q08AI8 447 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 QPCTQ16769 361 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 TSR1Q2NL82 804 aaKnown RBP12.35□□□□□ -0.43
DDX39B-214ENST00000458640 DACT2Q5SW24 774 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 SMC1BQ8NDV3 1235 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 IRGQQ8WZA9 623 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 RAPGEF5Q92565 580 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 CAPZA3Q96KX2 299 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 RAB17Q9H0T7 212 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 PIM2Q9P1W9 311 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 HDAC6Q9UBN7 1215 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 SCOCQ9UIL1 159 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 MYH8P13535 1937 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 PDE2AO00408 941 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-214ENST00000458640 ZBTB7AO95365 584 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 VCAM1P19320 739 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 BMP6P22004 513 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 CYLC1P35663 651 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-214ENST00000458640 SKIV2L2P42285 1042 aaKnown RBP12.35□□□□□ -0.43
DDX39B-214ENST00000458640 CRKP46108 304 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 FXR1P51114 621 aaKnown RBP eCLIP12.35□□□□□ -0.43
DDX39B-214ENST00000458640 INHBCP55103 352 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 PHEXP78562 749 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 MRPS25P82663 173 aaKnown RBP12.35□□□□□ -0.43
DDX39B-214ENST00000458640 MYBPC2Q14324 1141 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 NTRK3Q16288 839 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 HAUS3Q68CZ6 603 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 C8orf74Q6P047 294 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 C16orf86Q6ZW13 317 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 ZNF365Q70YC5 407 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 TRPM8Q7Z2W7 1104 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 TBC1D1Q86TI0 1168 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-214ENST00000458640 DGKHQ86XP1 1220 aa12.35□□□□□ -0.43
DDX39B-214ENST00000458640 ZBTB8BQ8NAP8 495 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms