RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 CRTC2Q53ET0 693 aaPredicted RBP12.96□□□□□ -0.33
SYNE2-207ENST00000458046 TRAPPC11Q7Z392 1133 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 AMIGO3Q86WK7 504 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 JPH3Q8WXH2 748 aaPredicted RBP12.96□□□□□ -0.33
SYNE2-207ENST00000458046 P2RX5Q93086 422 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 CNOT6LQ96LI5 555 aaKnown RBP12.96□□□□□ -0.33
SYNE2-207ENST00000458046 FAM210AQ96ND0 272 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 TRIM9Q9C026 710 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 NHEJ1Q9H9Q4 299 aaPredicted RBP12.96□□□□□ -0.33
SYNE2-207ENST00000458046 NARFQ9UHQ1 456 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 PSMD14O00487 310 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 PRMT3O60678 531 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 INMTO95050 263 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 BAG3O95817 575 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 OR52Z1P0C646 297 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 YBX3P16989 372 aaKnown RBP eCLIP12.96□□□□□ -0.33
SYNE2-207ENST00000458046 TUBB4BP68371 445 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 NFIXQ14938 502 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 KIAA1614Q5VZ46 1190 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 DAGLBQ8NCG7 672 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 FLCNQ8NFG4 579 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 JAKMIP2Q96AA8 810 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 DHTKD1Q96HY7 919 aaPredicted RBP12.96□□□□□ -0.33
SYNE2-207ENST00000458046 PAWRQ96IZ0 340 aaKnown RBP12.96□□□□□ -0.33
SYNE2-207ENST00000458046 HINFPQ9BQA5 517 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 NOC4LQ9BVI4 516 aaKnown RBP12.96□□□□□ -0.33
SYNE2-207ENST00000458046 ZNHIT6Q9NWK9 470 aaKnown RBP12.96□□□□□ -0.33
SYNE2-207ENST00000458046 SAR1BQ9Y6B6 198 aa12.96□□□□□ -0.33
SYNE2-207ENST00000458046 FLT1P17948 1338 aa12.96□□□□□ -0.34
SYNE2-207ENST00000458046 DLEC1Q9Y238 1755 aa12.96□□□□□ -0.34
SYNE2-207ENST00000458046 MACROD2A1Z1Q3 448 aa12.96□□□□□ -0.34
SYNE2-207ENST00000458046 LRRIQ3A6PVS8 624 aaPredicted RBP12.96□□□□□ -0.34
SYNE2-207ENST00000458046 TXKP42681 527 aa12.96□□□□□ -0.34
SYNE2-207ENST00000458046 KRT83P78385 493 aa12.96□□□□□ -0.34
SYNE2-207ENST00000458046 LCA5Q86VQ0 697 aa12.96□□□□□ -0.34
SYNE2-207ENST00000458046 SLC39A2Q9NP94 309 aa12.96□□□□□ -0.34
SYNE2-207ENST00000458046 SCN7AQ01118 1682 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 ZNF185O15231 689 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 AP1G2O75843 785 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 ATP2B4P23634 1241 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 CCNE1P24864 410 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 ZNF76P36508 570 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 NONOQ15233 471 aaKnown RBP eCLIP12.95□□□□□ -0.34
SYNE2-207ENST00000458046 GALNT17Q6IS24 598 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 WDR66Q8TBY9 1149 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 SH3KBP1Q96B97 665 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 GDAP1L1Q96MZ0 367 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 ZMYND12Q9H0C1 365 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 LAMB2P55268 1798 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 LAD1O00515 517 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 LZTS3O60299 673 aaPredicted RBP12.95□□□□□ -0.34
SYNE2-207ENST00000458046 PRPHP41219 470 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 MTMR3Q13615 1198 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 ZSCAN26Q16670 478 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 KRT26Q7Z3Y9 468 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 ZNF713Q8N859 430 aaPredicted RBP12.95□□□□□ -0.34
SYNE2-207ENST00000458046 SMC1BQ8NDV3 1235 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 TBCKQ8TEA7 893 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 EXOC4Q96A65 974 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 PIGSQ96S52 555 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 EYA3Q99504 573 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 TTYH3Q9C0H2 523 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 TMEM260Q9NX78 707 aa12.95□□□□□ -0.34
SYNE2-207ENST00000458046 KRT86O43790 486 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 PLEKP08567 350 aaPredicted RBP12.94□□□□□ -0.34
SYNE2-207ENST00000458046 CYLC1P35663 651 aaPredicted RBP12.94□□□□□ -0.34
SYNE2-207ENST00000458046 CDK8P49336 464 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 MEA1Q16626 185 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 MIIPQ5JXC2 388 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 SOGA3Q5TF21 947 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 IQCEQ6IPM2 695 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 PGBD4Q96DM1 585 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 GBP3Q9H0R5 595 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 C6orf50Q9HD87 102 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 MKS1Q9NXB0 559 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 IRS2Q9Y4H2 1338 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 IPO7O95373 1038 aaKnown RBP12.94□□□□□ -0.34
SYNE2-207ENST00000458046 TRPC1P48995 793 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 FAM182BQ5T319 152 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 DYMQ7RTS9 669 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 KRT25Q7Z3Z0 450 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 NEK8Q86SG6 692 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 POTEDQ86YR6 584 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 SMCR8Q8TEV9 937 aaPredicted RBP12.94□□□□□ -0.34
SYNE2-207ENST00000458046 NOC3LQ8WTT2 800 aaKnown RBP12.94□□□□□ -0.34
SYNE2-207ENST00000458046 ZFPM2Q8WW38 1151 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 AK8Q96MA6 479 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 MMTAG2Q9BU76 263 aaKnown RBP12.94□□□□□ -0.34
SYNE2-207ENST00000458046 SEMA6BQ9H3T3 888 aa12.94□□□□□ -0.34
SYNE2-207ENST00000458046 SUDS3Q9H7L9 328 aaPredicted RBP12.94□□□□□ -0.34
SYNE2-207ENST00000458046 RPS6KA4O75676 772 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 TNNT3P45378 269 aaPredicted RBP12.93□□□□□ -0.34
SYNE2-207ENST00000458046 USP14P54578 494 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 TKFCQ3LXA3 575 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 PAPD7Q5XG87 772 aaKnown RBP12.93□□□□□ -0.34
SYNE2-207ENST00000458046 METTL3Q86U44 580 aaKnown RBP12.93□□□□□ -0.34
SYNE2-207ENST00000458046 KIAA0895Q8NCT3 520 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 CAGE1Q8TC20 777 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 SKA1Q96BD8 255 aa12.93□□□□□ -0.34
SYNE2-207ENST00000458046 TBC1D31Q96DN5 1066 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms