RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 GHRP10912 638 aa17.94■□□□□ 0.46
CHCHD3-204ENST00000457942 SCG2P13521 617 aa17.94■□□□□ 0.46
CHCHD3-204ENST00000457942 PSMA5P28066 241 aa17.94■□□□□ 0.46
CHCHD3-204ENST00000457942 ADAM17P78536 824 aa17.94■□□□□ 0.46
CHCHD3-204ENST00000457942 PFKFB3Q16875 520 aaPredicted RBP17.94■□□□□ 0.46
CHCHD3-204ENST00000457942 POTEBQ6S5H4 581 aa17.94■□□□□ 0.46
CHCHD3-204ENST00000457942 ADHFE1Q8IWW8 467 aa17.94■□□□□ 0.46
CHCHD3-204ENST00000457942 SAMD11Q96NU1 681 aa17.94■□□□□ 0.46
CHCHD3-204ENST00000457942 FAM49AQ9H0Q0 323 aaPredicted RBP17.94■□□□□ 0.46
CHCHD3-204ENST00000457942 FAM217BQ9NTX9 383 aaPredicted RBP17.94■□□□□ 0.46
CHCHD3-204ENST00000457942 RPS6KB1P23443 525 aa17.93■□□□□ 0.46
CHCHD3-204ENST00000457942 SREBF1P36956 1147 aa17.93■□□□□ 0.46
CHCHD3-204ENST00000457942 ACTR2P61160 394 aa17.93■□□□□ 0.46
CHCHD3-204ENST00000457942 DLX2Q07687 328 aaPredicted RBP17.93■□□□□ 0.46
CHCHD3-204ENST00000457942 DNAJB3Q8WWF6 145 aa17.93■□□□□ 0.46
CHCHD3-204ENST00000457942 TNPO1Q92973 898 aaKnown RBP17.93■□□□□ 0.46
CHCHD3-204ENST00000457942 SNX27Q96L92 541 aa17.93■□□□□ 0.46
CHCHD3-204ENST00000457942 IGFLR1Q9H665 355 aa17.93■□□□□ 0.46
CHCHD3-204ENST00000457942 AGO4Q9HCK5 861 aaKnown RBP17.93■□□□□ 0.46
CHCHD3-204ENST00000457942 C6orf50Q9HD87 102 aa17.93■□□□□ 0.46
CHCHD3-204ENST00000457942 NFASCO94856 1347 aa17.93■□□□□ 0.46
CHCHD3-204ENST00000457942 RALGAPA2Q2PPJ7 1873 aa17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 RRN3P2A6NIE6 340 aa17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 M0QZ92 97 aa17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 BACH1O14867 736 aa17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 INSRRP14616 1297 aa17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 GTF2F1P35269 517 aaKnown RBP eCLIP17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 FAM26DQ5JW98 314 aa17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 PLA2G4DQ86XP0 818 aa17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 REXO1Q8N1G1 1221 aaKnown RBP17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 KCNB2Q92953 911 aa17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 PHKBQ93100 1093 aa17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 PRKAG3Q9UGI9 489 aa17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 TCEAL9Q9UHQ7 104 aa17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 USP34Q70CQ2 3546 aa17.92■□□□□ 0.46
CHCHD3-204ENST00000457942 COL4A6Q14031 1691 aa17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 C19orf67A6NJJ6 358 aa17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 LINC01565O15544 149 aa17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 PPFIA3O75145 1194 aa17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 CHRNA1P02708 482 aa17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 LTBRP36941 435 aa17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 CLK2P49760 499 aaKnown RBP17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 STAT5BP51692 787 aa17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 HYAL1Q12794 435 aa17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 ITGB3BPQ13352 177 aaPredicted RBP17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 PRSS33Q8NF86 280 aa17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 ZBTB10Q96DT7 871 aa17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 PCYT2Q99447 389 aa17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 SLC26A6Q9BXS9 759 aa17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 CDY2AQ9Y6F7 541 aa17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 ZNF318Q5VUA4 2279 aa17.91■□□□□ 0.46
CHCHD3-204ENST00000457942 MEIS1O00470 390 aa17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 GRM6O15303 877 aa17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 TBX10O75333 385 aa17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 RPLP2P05387 115 aaKnown RBP17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 GNA11P29992 359 aa17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 MRPS6P82932 125 aaKnown RBP17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 PLCB4Q15147 1175 aa17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 FAM160B1Q5W0V3 765 aa17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 RNF135Q8IUD6 432 aa17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 CCDC148Q8NFR7 591 aa17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 TRAPPC12Q8WVT3 735 aa17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 TOP1MTQ969P6 601 aa17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 MFSD14AQ96MC6 490 aa17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 UPF3BQ9BZI7 483 aaKnown RBP17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 NID2Q14112 1375 aa17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 LOXHD1Q8IVV2 1947 aa17.9■□□□□ 0.46
CHCHD3-204ENST00000457942 ESYT2A0FGR8 921 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 MBLAC1A4D2B0 266 aaPredicted RBP17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 PRPF3O43395 683 aaKnown RBP17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 MBTPS2O43462 519 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 CCT2P78371 535 aaKnown RBP17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 MGAT3Q09327 533 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 TMEM62Q0P6H9 643 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 LPIN1Q14693 890 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 COL19A1Q14993 1142 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 MARCH8Q5T0T0 291 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 IER5Q5VY09 327 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 MCTP2Q6DN12 878 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 NIPA1Q7RTP0 329 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 PLPPR4Q7Z2D5 763 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 FIBCD1Q8N539 461 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 BICD2Q8TD16 824 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 ZNF577Q9BSK1 485 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 ZMYND12Q9H0C1 365 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 KCNH6Q9H252 994 aa17.89■□□□□ 0.45
CHCHD3-204ENST00000457942 MYH9P35579 1960 aaKnown RBP17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 FAM86B1E9PN63 330 aa17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 FAM86B2P0C5J1 330 aa17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 SETQ01105 290 aaPredicted RBP17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 SMAD2Q15796 467 aaKnown RBP17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 FBXO47Q5MNV8 452 aa17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 IER5LQ5T953 404 aa17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 MIS18BP1Q6P0N0 1132 aa17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 TSHZ1Q6ZSZ6 1077 aa17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 CKAP2LQ8IYA6 745 aa17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 RASGRP4Q8TDF6 673 aa17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 POP1Q99575 1024 aaKnown RBP17.88■□□□□ 0.45
CHCHD3-204ENST00000457942 RNF26Q9BY78 433 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms