RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 GDF6Q6KF10 455 aaPredicted RBP11.33□□□□□ -0.6
ATG4A-206ENST00000457035 MIER3Q7Z3K6 550 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 BRAPQ7Z569 592 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 RDM1Q8NG50 284 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 TRIM43Q96BQ3 446 aaPredicted RBP11.33□□□□□ -0.6
ATG4A-206ENST00000457035 AZI2Q9H6S1 392 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 TTC12Q9H892 705 aaPredicted RBP11.33□□□□□ -0.6
ATG4A-206ENST00000457035 ZNF302Q9NR11 478 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 TRMT13Q9NUP7 481 aaKnown RBP11.33□□□□□ -0.6
ATG4A-206ENST00000457035 ZNF215Q9UL58 517 aaPredicted RBP11.33□□□□□ -0.6
ATG4A-206ENST00000457035 PCDHA12Q9UN75 941 aa11.33□□□□□ -0.6
ATG4A-206ENST00000457035 A0A1W2PPC1 479 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 BACH1O14867 736 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 KIAA0355O15063 1070 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 CHMP2AO43633 222 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 ZNF862O60290 1169 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 CLTBP09497 229 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 SMIM10L2AP0DMW4 78 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 SMIM10L2BP0DMW5 78 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 MARK3P27448 753 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 TXKP42681 527 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 SLC26A2P50443 739 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 ZNF200P98182 395 aaPredicted RBP11.32□□□□□ -0.6
ATG4A-206ENST00000457035 FAM47CQ5HY64 1035 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 FAM160B1Q5W0V3 765 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 C7orf31Q8N865 590 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 ZSCAN16Q9H4T2 348 aaPredicted RBP11.32□□□□□ -0.6
ATG4A-206ENST00000457035 PDLIM7Q9NR12 457 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 SETD4Q9NVD3 440 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 GABBR1Q9UBS5 961 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 TBX21Q9UL17 535 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 SAMM50Q9Y512 469 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 LOXHD1Q8IVV2 1947 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 MYH15Q9Y2K3 1946 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 RANBP2P49792 3224 aaKnown RBP11.32□□□□□ -0.6
ATG4A-206ENST00000457035 LTBP2Q14767 1821 aa11.32□□□□□ -0.6
ATG4A-206ENST00000457035 POTEB3A0JP26 581 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 POTEMA6NI47 508 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 TLR3O15455 904 aaKnown RBP11.31□□□□□ -0.6
ATG4A-206ENST00000457035 STBD1O95210 358 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 OR52Z1P0C646 297 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 INSRRP14616 1297 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 ITGB8P26012 769 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 MAGEA10P43363 369 aaPredicted RBP11.31□□□□□ -0.6
ATG4A-206ENST00000457035 PKP1Q13835 747 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 EPHA7Q15375 998 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 IL17AQ16552 155 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 PTGISQ16647 500 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 UGCGQ16739 394 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 PDXDC2PQ6P474 469 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 FAM173BQ6P4H8 233 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 GDF15Q99988 308 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 HSD17B14Q9BPX1 270 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 TMEM39AQ9NV64 488 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 TCEAL9Q9UHQ7 104 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 SCN5AQ14524 2016 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 NRCAMQ92823 1304 aa11.31□□□□□ -0.6
ATG4A-206ENST00000457035 C17orf102A2RUQ5 167 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 ZBTB42B2RXF5 422 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 LAD1O00515 517 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 TREHO43280 583 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 HBP1O60381 514 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 SLITRK3O94933 977 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 P4HBP07237 508 aaKnown RBP11.3□□□□□ -0.6
ATG4A-206ENST00000457035 ZSCAN22P10073 491 aaPredicted RBP11.3□□□□□ -0.6
ATG4A-206ENST00000457035 CYP2C9P11712 490 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 PRPHP41219 470 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 TECP42680 631 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 ATP2C1P98194 919 aaPredicted RBP11.3□□□□□ -0.6
ATG4A-206ENST00000457035 PDIA5Q14554 519 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 MARCH8Q5T0T0 291 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 POTEGQ6S5H5 508 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 ATP8B4Q8TF62 1192 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 LMBR1Q8WVP7 490 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 RGL1Q9NZL6 768 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 ZDHHC9Q9Y397 364 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 IGSF9BQ9UPX0 1349 aa11.3□□□□□ -0.6
ATG4A-206ENST00000457035 MBLAC1A4D2B0 266 aaPredicted RBP11.29□□□□□ -0.6
ATG4A-206ENST00000457035 RRN3P2A6NIE6 340 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 TIMP1P01033 207 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 GNAT1P11488 350 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 BMP8BP34820 402 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 QARSP47897 775 aaKnown RBP11.29□□□□□ -0.6
ATG4A-206ENST00000457035 PSMC5P62195 406 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 PPFIA1Q13136 1202 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 PTPAQ15257 358 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 SF3A1Q15459 793 aaKnown RBP11.29□□□□□ -0.6
ATG4A-206ENST00000457035 GRIK4Q16099 956 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 NCAPH2Q6IBW4 605 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 SERINC5Q86VE9 423 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 IGSF22Q8N9C0 903 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 BANK1Q8NDB2 785 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 BBXQ8WY36 941 aaPredicted RBP11.29□□□□□ -0.6
ATG4A-206ENST00000457035 DHX38Q92620 1227 aaKnown RBP11.29□□□□□ -0.6
ATG4A-206ENST00000457035 TNPO1Q92973 898 aaKnown RBP11.29□□□□□ -0.6
ATG4A-206ENST00000457035 ATP6V0A1Q93050 837 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 WNT8BQ93098 351 aa11.29□□□□□ -0.6
ATG4A-206ENST00000457035 EIF2AK1Q9BQI3 630 aaKnown RBP11.29□□□□□ -0.6
ATG4A-206ENST00000457035 NOC4LQ9BVI4 516 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms